| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1394105 | 72 (0.580) | 15 (0.120) | 12/178 | NT | 17.2% | coding (879/1614 nt) | mppA | murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit |
| ? | NC_000913 | 1396044 = | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 103 total aligned reads displayed.
GGATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTA > NC_000913/1394006‑1394204 | ggATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCtat < 2:1345618/100‑1 (MQ=255) gATATTGTGATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCtatt < 2:1168178/100‑1 (MQ=255) gATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATg < 2:2310811‑M1/100‑2 (MQ=255) atatTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCtatta < 2:594395/100‑1 (MQ=255) atTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCtattatt > 2:3174747/1‑100 (MQ=255) ttGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCtattatta < 1:114930/100‑1 (MQ=255) tGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaagg > 2:289050‑M1/1‑94 (MQ=255) atatCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtg < 1:2892834‑M1/100‑9 (MQ=255) atatCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGc > 1:37973/1‑100 (MQ=255) atatCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGc > 2:217368/1‑100 (MQ=255) atCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGt > 1:2250092/1‑100 (MQ=255) tCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGtt < 1:2346626/100‑1 (MQ=255) cACCGAATCCTTCCCGAAGAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGtt < 2:78990/99‑1 (MQ=255) cACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGttt > 1:1606198/1‑100 (MQ=255) cGAATCCTTCCCGAAAAATATGTATCAGAACCTGTTGCAGAATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTa < 1:2377347/98‑1 (MQ=255) gAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAaca > 1:1508113/1‑100 (MQ=255) gAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTACggaaggtgcgaacaag > 1:1979558‑M1/1‑84 (MQ=255) aaTCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagt > 1:1083310‑M1/1‑83 (MQ=255) aaTCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagt > 1:1083274‑M1/1‑83 (MQ=255) aaTCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAacac < 2:2311044/100‑1 (MQ=255) aaTCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAacac < 2:612071/100‑1 (MQ=255) tCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGc > 1:2043996/1‑100 (MQ=255) cTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCaa > 2:2347990/1‑100 (MQ=255) cTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCAGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCaa > 2:128989/1‑100 (MQ=255) cTTCCCGAAAAATATGTAGCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccct < 1:1360455‑M1/100‑22 (MQ=255) ccGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAg > 1:133987/1‑100 (MQ=255) ccGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAg > 2:373059/1‑100 (MQ=255) gAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAggg < 2:2778188/100‑1 (MQ=255) aaTATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGa < 2:1112158/100‑1 (MQ=255) tATCAGAGGCTGTTGAAGGATATTCCGGGGCAGGGTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAg < 2:1427086/100‑1 (MQ=255) tATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAg > 2:2014971/1‑100 (MQ=255) tATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAg < 2:802160/100‑1 (MQ=255) tATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAg < 1:2196566/100‑1 (MQ=255) ntCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGa > 1:32149/2‑100 (MQ=255) aTCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATATGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGa > 1:185038/1‑100 (MQ=255) tCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttg < 1:468737‑M1/100‑40 (MQ=255) cAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATATGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATc > 1:2456443/1‑100 (MQ=255) aGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTAGACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGC‑AAAAGGGCCGACGGCAGATc < 1:386859/98‑1 (MQ=255) gAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATc < 1:1430309/98‑1 (MQ=255) aaGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAgc < 1:687556/100‑1 (MQ=255) aGCTGTGGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTATAAAAAAAAAAAAGGGCCGACGGCAGATCAgcg < 1:2739558/100‑1 (MQ=255) gCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct < 1:1397976‑M1/100‑46 (MQ=255) cTGTTGAAGGATATTCCGGTGCAGGTTTATACGCCGCCGTAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGcgcg < 1:2236118/100‑1 (MQ=255) cTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGcgcg < 1:2820926/100‑1 (MQ=255) gTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGtt > 2:1262757/1‑100 (MQ=255) tGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCg > 2:1734921/1‑100 (MQ=255) tGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCg > 1:31932/1‑100 (MQ=255) naaGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGt > 2:2609172/2‑100 (MQ=255) gAAGGATATTCTGGGGCAGGTTCATACGCCGCCGCCTCTCGGTAGCGATTATTATCAGTTTAGCACGCAAAAAGGGCCGATGGCAGATCAccgcttcagt > 1:3085566/1‑94 (MQ=255) gAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc > 1:881212‑M1/1‑49 (MQ=255) gAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGt > 1:2209791/1‑100 (MQ=255) aGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGCCCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCt > 1:2392377/1‑100 (MQ=255) ggATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata > 1:1204907‑M1/1‑46 (MQ=255) atatTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGc < 2:1283327/100‑1 (MQ=255) tatTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCa > 2:558582/1‑100 (MQ=255) tatTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCa < 1:1204569/100‑1 (MQ=255) ttCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCAACGGCAGATCAGCGCGTTCGTCTGGCAt > 1:527499/1‑99 (MQ=255) ccGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTaa < 2:1426761/100‑1 (MQ=255) cGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCa < 1:3009350/95‑1 (MQ=255) cGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAg > 2:1446365/1‑100 (MQ=255) ggCAGGTTTATACGCCGTCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTAt > 2:2797588/1‑100 (MQ=255) gCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATg < 1:567655/100‑1 (MQ=255) aGGTTTATACGCCGCCGCAGCTCGGGACGTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGAc < 1:1431675/100‑1 (MQ=255) ngtTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 2:3299912‑M1/2‑31 (MQ=255) ggTTTATACGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 2:455562‑M1/100‑70 (MQ=255) ggTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACg > 1:2899529/1‑100 (MQ=255) ggTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACg > 2:1005649/1‑100 (MQ=255) ggTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACg > 1:767429/1‑100 (MQ=255) ggTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTGTCACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCAGGCACTAAGAATGACg > 1:280494/1‑100 (MQ=255) gTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGa > 2:440586/1‑100 (MQ=255) tttATACGCCGCCGCAGCTCGGGACCTATTATTAGGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGa < 1:1090496/99‑1 (MQ=255) ttctacgcCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:2357583‑M1/4‑28 (MQ=255) ttATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATa < 2:719500/100‑1 (MQ=255) tataCGCCGCCGCAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:2499504‑M1/100‑74 (MQ=255) ataCGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCACAAAGGGCCGACGTCAGATAAGCGCGTTCGTCTGGCATTAATTATGACGATAGa > 2:511556/1‑100 (MQ=255) taCGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGAt > 2:1116976/1‑100 (MQ=255) cgctgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGCTAGa > 1:577539/1‑97 (MQ=255) cgccgccgcAGCTCGGGACCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat > 1:1296554‑M1/1‑23 (MQ=255) cgccgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATcg > 2:3369073/1‑100 (MQ=255) cgccgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATcg > 1:2503109/1‑100 (MQ=255) cgccgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATcg < 1:373057/100‑1 (MQ=255) gccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATcgccgc > 2:2714922/1‑100 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCgccgcc < 1:2726051/100‑1 (MQ=255) gcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCTCGATCGACTGGCATTAAGTATGACGATAGATCGCCGCCtg > 1:2101520/1‑100 (MQ=255) gcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCtg < 2:477079/100‑1 (MQ=255) cAGCTCGGGACCTATTATTATGAAAAAAAAAAAAAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCtg < 1:1272118/99‑1 (MQ=255) cTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCtgatga > 1:1500145/1‑100 (MQ=255) cTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCtgatga < 1:2014958/100‑1 (MQ=255) cGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGAcc < 2:280495/100‑1 (MQ=255) cGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGAcc < 2:133987/100‑1 (MQ=255) cGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGAcc < 2:185038/100‑1 (MQ=255) ccTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGaaaa < 2:2637096/100‑1 (MQ=255) ccTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGaaaa < 2:1938173/100‑1 (MQ=255) cTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGaaaaa < 2:2922829/100‑1 (MQ=255) cTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTAATGACTGaaaa > 1:643235/1‑99 (MQ=255) tattattatGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAg > 2:1420846/1‑100 (MQ=255) tattattatGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAg > 1:217058/1‑100 (MQ=255) tATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 2:3013814‑M1/1‑3 (MQ=255) tggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg < 1:1753035‑M1/100‑100 (MQ=255) tggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg < 2:2781509‑M1/100‑100 (MQ=255) | GGATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTA > NC_000913/1394006‑1394204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |