New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2808135 =NA (NA)10 (0.090) 6/164 NT NA noncoding (5/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2808165 = NA (NA)noncoding (35/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 156 total aligned reads displayed.

ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234
                                                                                                   |                                                                                                   
tgatgaatatgggatgaaagatagattgttgaaatgtgcgctgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacg                                                                                                     <  2:389602‑M1/1‑1 (MQ=255)
tgatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacg                                                                                                     <  1:2843052‑M1/1‑1 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    >  1:3333292/1‑100 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    >  2:668703/1‑100 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    <  2:573434/100‑1 (MQ=255)
 gatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacgg                                                                                                    <  1:1282599‑M1/2‑1 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGAGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTGGGGCg                                                                                                  >  1:1399956/1‑100 (MQ=255)
     cAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGa                                                                                                >  2:1515660/1‑100 (MQ=255)
     aatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGa                                                                                                >  2:2237732‑M1/95‑100 (MQ=255)
     aatatgggatgaaagacagattgttgcaatgtgcgatgtggtttgtaggcatgataagatgcgccagcgtcgcatcaggcactgtgcacagaacggcgg                                                                                                 <  1:2550608‑M1/5‑1 (MQ=255)
      atatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGAt                                                                                               <  2:2256702‑M1/7‑1 (MQ=255)
      aGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGAt                                                                                               <  1:1394580/100‑1 (MQ=255)
       gggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATa                                                                                              <  1:2324848/100‑1 (MQ=255)
        ggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATaa                                                                                             <  1:3361312/100‑1 (MQ=255)
          acacGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAgg                                                                                           <  1:2712588/100‑1 (MQ=255)
           cccGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGc                                                                                          >  2:2297832/3‑100 (MQ=255)
           cacGTTGAGGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGc                                                                                          <  2:1123106/100‑1 (MQ=255)
            acGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCg                                                                                         <  1:722678/100‑1 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  1:3354068/1‑100 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  1:2672291/1‑100 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  2:3176803/1‑100 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  2:120335/1‑100 (MQ=255)
              gTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtt                                                                                       >  1:328813/1‑100 (MQ=255)
              gTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCCATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtt                                                                                       >  2:2395084/1‑100 (MQ=255)
                 gATGGTAGGATCAAAGCCCGCCAGCAGCAGTTCGAGGGCTGGGTGAATGAGGCGCTGGGAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGttt                                                                                      <  1:3180795/98‑1 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  >  1:1206830/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 <  2:1021841/100‑1 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  2:758828/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  1:871271/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  1:2359790/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 <  2:252488/100‑1 (MQ=255)
                    ggTTGGAGCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 <  1:2369376/100‑1 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                >  1:1267883/1‑100 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                >  1:2486242/1‑100 (MQ=255)
                      ttGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGc                                                                               >  1:3301324/1‑100 (MQ=255)
                      ttGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGc                                                                               <  1:2653894/100‑1 (MQ=255)
                          aTCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATcc                                                                           >  2:1375456/1‑100 (MQ=255)
                             tgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        >  2:2219317‑M1/71‑100 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGTGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  1:2952185/100‑1 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  1:2978864/100‑1 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        >  2:2604229/1‑100 (MQ=255)
                              gaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgccg                                                                       >  2:1567441‑M1/70‑100 (MQ=255)
                              gaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgccg                                                                       >  2:2219931‑M1/70‑100 (MQ=255)
                               aaatttgcgatttggtttgtaggcatgataatacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGTATAAGGCGTTTTTGCCGCATccgccg                                                                       >  1:76988‑M1/69‑99 (MQ=255)
                               aGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      <  2:893405/100‑1 (MQ=255)
                                gCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGtt                                                                     >  2:2489423/1‑100 (MQ=255)
                                 cccACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTc                                                                    >  1:791510/1‑100 (MQ=255)
                                 atgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTc                                                                    >  1:1154378‑M1/67‑100 (MQ=255)
                                   caccaGCAGCAGTTCGATGGCTGGGTGAATGAGACCCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtg                                                                  >  1:1170688/1‑100 (MQ=255)
                                    accaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgt                                                                 <  1:378634/100‑1 (MQ=255)
                                    accaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgt                                                                 <  2:113986/100‑1 (MQ=255)
                                     ccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                <  2:3247821/100‑1 (MQ=255)
                                     ccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                >  1:2636906/1‑100 (MQ=255)
                                      cagcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGc                                                               >  2:2843075/1‑100 (MQ=255)
                                      cagcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGc                                                               <  1:2562809/100‑1 (MQ=255)
                                      cagcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGc                                                               <  1:99340/100‑1 (MQ=255)
                                        gcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGcac                                                             <  2:3034764/100‑1 (MQ=255)
                                            cagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATg                                                         <  1:3029718/100‑1 (MQ=255)
                                             agTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACCATGc                                                        >  1:964703/1‑100 (MQ=255)
                                              gTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGcc                                                       >  1:2477610/1‑100 (MQ=255)
                                                tCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTg                                                     >  2:1014544/1‑100 (MQ=255)
                                                  gATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGAt                                                   <  2:2726776/100‑1 (MQ=255)
                                                  gATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGGTTTTGCCGCATGCGCCGTTCTGTGCACAATGCCTGAt                                                   >  1:224280/1‑100 (MQ=255)
                                                   aggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGCATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGAt                                                   >  1:1882568‑M1/49‑99 (MQ=255)
                                                      gCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGa                                               <  1:2213502/100‑1 (MQ=255)
                                                         gggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGc                                            <  2:1330127/100‑1 (MQ=255)
                                                          ggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           >  2:178759/1‑100 (MQ=255)
                                                           gTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTg                                          >  1:2427129/1‑100 (MQ=255)
                                                            tGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTTTTTTGTATAAGGCGATTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           >  1:1949595/1‑98 (MQ=37)
                                                            tGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTgg                                         <  1:1660038/100‑1 (MQ=255)
                                                             gAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgc                                        >  2:2790787/1‑100 (MQ=255)
                                                             gAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgc                                        <  2:1835400/100‑1 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       <  2:2665655/100‑1 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGCCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       <  1:1994266/100‑1 (MQ=255)
                                                               aTGAGGCGCTTGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCTTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      <  1:2221499/100‑1 (MQ=255)
                                                                  aGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTc                                   >  2:335628/1‑100 (MQ=255)
                                                                   ggCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCt                                  >  2:3312322/1‑100 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                <  1:3038877/100‑1 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                <  1:1014541/100‑1 (MQ=255)
                                                                         ggCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTTCTTTTTTTTCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATcgt                            >  1:3261919/1‑98 (MQ=25)
                                                                          gCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATg                           <  2:3140955/100‑1 (MQ=255)
                                                                           cAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGc                          >  2:512305/1‑100 (MQ=255)
                                                                             gcgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCt                        >  1:881340/1‑100 (MQ=255)
                                                                             gcgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTAGCATGCCt                        <  1:1771648/100‑1 (MQ=255)
                                                                              cgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                       <  2:196693/100‑1 (MQ=255)
                                                                               gcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                      >  1:567556/1‑100 (MQ=255)
                                                                                cAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                     <  2:2427998/100‑1 (MQ=255)
                                                                                cAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                     >  2:1740161/1‑100 (MQ=255)
                                                                                  gAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACaaa                   <  2:738237/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 >  2:970386/1‑100 (MQ=255)
                                                                                     gTAATTTTTATTCGGGCGGATAAGGCGTTTTGGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACca                <  1:444615/100‑1 (MQ=255)
                                                                                        aTTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACAt             >  2:1871987/1‑100 (MQ=255)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTTTTTTTTTTTCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:35946/1‑100 (MQ=21)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:1752937/1‑100 (MQ=255)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:1672121/1‑100 (MQ=255)
                                                                                            ttATTCGTGCGGATAACGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  1:1852196/100‑1 (MQ=255)
                                                                                            ttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  2:3009132/100‑1 (MQ=255)
                                                                                            ttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  1:1947928/100‑1 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  2:949996/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGATTTTGCCGCCTCCGCTGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTCCAAACCACATCGcaca       >  1:1641116/1‑97 (MQ=25)
                                                                                                   |                                                                                                   
ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.