New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)11 (0.100) 5/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 164 total aligned reads displayed.

GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATG  >  NC_000913/2888235‑2888432
                                                                                                   |                                                                                                  
ggCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttg                                                                                                    >  1:2138997/1‑100 (MQ=255)
 gaaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGc                                                                                                   <  2:294786‑M1/2‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                  >  2:1810447/1‑100 (MQ=255)
   aggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCt                                                                                                 >  2:2770233‑M1/97‑100 (MQ=255)
    ggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTg                                                                                                >  1:317216‑M1/96‑100 (MQ=255)
      aGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAt                                                                                              >  2:1917936/1‑100 (MQ=255)
      aGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAt                                                                                              <  1:1614608/100‑1 (MQ=255)
       gTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                             <  2:3013395/100‑1 (MQ=255)
       gTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                             <  2:151785/100‑1 (MQ=255)
         ttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCg                                                                                           >  2:3007823/1‑100 (MQ=255)
          tCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGa                                                                                          >  2:1394073/1‑100 (MQ=255)
           ccGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGAc                                                                                         >  2:311012/1‑100 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGTACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        <  1:74492/100‑1 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        <  2:3070259/100‑1 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        >  1:824383/1‑100 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        >  1:961288/1‑100 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        >  2:2460897/1‑100 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                        <  2:2466809/100‑1 (MQ=255)
             gccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGagatcggaa                                                                                       >  1:368225/1‑92 (MQ=255)
                agcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCa                                                                                    <  1:2790310/100‑1 (MQ=255)
                agcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCa                                                                                    <  1:1717676/100‑1 (MQ=255)
                  cgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                  <  2:2549608/100‑1 (MQ=255)
                  cgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                  <  2:1054666/100‑1 (MQ=255)
                   gccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgc                                                                                 >  2:2980943/1‑100 (MQ=255)
                   gccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                  <  1:2597746/99‑1 (MQ=255)
                   gccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                  <  1:69085/99‑1 (MQ=255)
                    ccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgcg                                                                                >  2:1123533/1‑100 (MQ=255)
                    ccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgcg                                                                                <  2:1540352/100‑1 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                             <  2:2166265/100‑1 (MQ=255)
                        aaTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCt                                                                            <  2:361135/100‑1 (MQ=255)
                        aaTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTACATCGAGTTTGGACATAGATGCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCt                                                                            <  1:1841300/100‑1 (MQ=255)
                         aTGCGATCTACCTTCGGCAGTTCGTTCAGGGTGTTTAGATCGGGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGGGACGCTCACGCGTTCt                                                                            <  1:2009129/99‑1 (MQ=255)
                          tGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTa                                                                          <  2:943785/100‑1 (MQ=255)
                             gATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCa                                                                       >  1:261321/1‑100 (MQ=255)
                             gATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCa                                                                       <  2:22104/100‑1 (MQ=255)
                              aTCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAg                                                                      >  2:2110208/1‑100 (MQ=255)
                               tCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTCTCa                                                                       >  1:2000993/1‑98 (MQ=255)
                                 catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                   >  2:3202703‑M1/67‑100 (MQ=255)
                                 catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                   >  2:2911726‑M1/67‑100 (MQ=255)
                                 catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                   >  2:2867841‑M1/67‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                  >  1:435238‑M1/66‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                  >  2:350738‑M1/66‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                  >  2:2454867‑M1/66‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggataaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                  >  1:853329‑M1/66‑100 (MQ=255)
                                   tcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                 >  1:788721‑M1/65‑100 (MQ=255)
                                   ccTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                 >  2:2395490/1‑100 (MQ=255)
                                    cTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                >  2:1603601/1‑100 (MQ=255)
                                    cTTCGGAAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCATGATGCGACCCTCACGCGTTCTTATCAGGCCt                                                                  >  1:1122825/1‑98 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                               <  2:695755/100‑1 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                               <  1:2687234/100‑1 (MQ=255)
                                      tCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                              <  2:2780791/100‑1 (MQ=255)
                                       cGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAg                                                             <  2:643865/100‑1 (MQ=255)
                                        ggCAGTTCGTTCAGGGCGTTTAGATCGGGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACacg                                                             <  1:3306447/99‑3 (MQ=255)
                                        ggCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACCTAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                              >  1:2224172/1‑98 (MQ=255)
                                        ggCAGGTCGTTCAGGGCGTTTAGATCGAGTTTGGACATCGATTCTTCACTGTTTGCTTTGCCTGATCCGACACTCACGCGTTCTTATCAGTCCTGCa                                                               >  1:2360689/1‑97 (MQ=255)
                                         gCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGAc                                                           <  2:2324108/100‑1 (MQ=255)
                                           aGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGTCTGATGCGACTCTCACGCGTTCTTATCAGGCCTACAAGActg                                                         <  2:2292629/100‑3 (MQ=255)
                                           aGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCGCGCGTTCTTATCAAGCCTACAAGAcc                                                          >  2:2003552/1‑99 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                        <  2:426476/100‑1 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                        >  2:2059385/1‑100 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                        >  2:2479703/1‑100 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCGTCCCTCGAGCGACGCTCACGCGGACTCATCTGGCCTACAAGACCGGGc                                                      <  1:1187805/100‑1 (MQ=255)
                                               cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                     >  2:1090615/1‑100 (MQ=255)
                                                  tcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGAt                                                  <  2:1709744/100‑1 (MQ=255)
                                                   cAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATg                                                 >  2:845150/1‑100 (MQ=255)
                                                   cAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATg                                                 <  1:1828649/100‑1 (MQ=255)
                                                          tttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATc                                          >  1:418841/1‑100 (MQ=255)
                                                            tAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                        >  2:3179331/1‑100 (MQ=255)
                                                            tAGATCGAGTTTGGACATAGACTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                        <  1:796108/100‑1 (MQ=255)
                                                              gATCGTGTTTGAACGTAGATGCAGCGCTGTGTGCCATGCCTGCTGGGTCGCTCACGCGTTCTTAGCAGGTCTACAAGACGGGGATGATGGGTaacacc                                        <  1:2800297/98‑5 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcan                                      <  2:251348/100‑2 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                      >  2:774239/1‑100 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                      <  1:3008995/100‑1 (MQ=255)
                                                                tCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACaa                                    >  2:3313128/1‑100 (MQ=255)
                                                                 cGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACaaa                                   <  1:3363433/100‑1 (MQ=255)
                                                                 cGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACaaa                                   <  1:2105410/100‑1 (MQ=255)
                                                                      ttGGACATGGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                              <  2:2192980/100‑1 (MQ=255)
                                                                       tGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcgc                             >  2:1204309/1‑100 (MQ=255)
                                                                         gACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACgcgc                           >  2:2581921/1‑100 (MQ=255)
                                                                           cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                         >  1:1299448/1‑100 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCTTTCTTATCAGCCCTACAAGACCAGACAGATGGTTAATCCCACAAATCACGCGCCGGa                       >  1:3252640/1‑100 (MQ=38)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACCAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCgg                        >  1:1615985/1‑99 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                       >  1:3253552/1‑100 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                       >  2:240357/1‑100 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                       >  2:2825284/1‑100 (MQ=255)
                                                                               gATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATc                     >  2:2335247/1‑100 (MQ=255)
                                                                                  tCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAg                  <  1:629592/100‑1 (MQ=255)
                                                                                   ccTCACTGTTGGCCTTGCCTGATGCGACGCTCTCGCGTTCTTATCGGGCCTACACGACCGGGCGGATGGTTAATCCCACAAATCACGCGCCGGATc                     <  1:2017964/96‑1 (MQ=38)
                                                                                      cACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAcc              <  1:227892/100‑1 (MQ=255)
                                                                                        cTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCACGCCTACAAGAACGGGCTGATGGTTAATACCACAAATCACGCGCCGGATCGAGCACCg             <  2:672084/99‑1 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc          <  2:334871/100‑1 (MQ=255)
                                                                                            ttgccttgccTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCCGGCg         >  1:1597225/1‑99 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat      <  1:2460878/100‑1 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat      >  2:536508/1‑100 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACTGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg     >  1:3384829/1‑100 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg     <  1:2050025/100‑1 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat      <  2:454052/99‑1 (MQ=255)
                                                                                                  tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg  <  1:1444529/100‑1 (MQ=255)
                                                                                                  tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg  >  2:467406/1‑100 (MQ=255)
                                                                                                  tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg  <  2:3095290/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATG  >  NC_000913/2888235‑2888432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.