New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3214896 =NA (NA)7 (0.060) 7/168 NT NA noncoding (5/33 nt) REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3214925 = NA (NA)intergenic (+37/+42) rpoD/mug RNA polymerase, sigma 70 (sigma D) factor/G/U mismatch‑specific DNA glycosylase; xanthine DNA glycosylase

Only 100 of 173 total aligned reads displayed.

GCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGT  >  NC_000913/3214797‑3214995
                                                                                                   |                                                                                                   
gcgAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAgg                                                                                                     >  2:2493145/1‑100 (MQ=255)
 aactggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGc                                                                                                    <  1:2493126‑M1/2‑1 (MQ=255)
 aactggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGc                                                                                                    >  2:1752045‑M1/99‑100 (MQ=255)
  actggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGcc                                                                                                   >  1:1910158‑M1/98‑100 (MQ=255)
   ctggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCg                                                                                                  <  2:111231‑M1/4‑1 (MQ=255)
   ctggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCg                                                                                                  >  1:1602187‑M1/97‑100 (MQ=255)
   aaCGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCGGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCg                                                                                                  >  1:556801/1‑100 (MQ=255)
     cGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGa                                                                                                >  2:2850181/1‑100 (MQ=255)
      gTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGAt                                                                                               <  2:1879988/100‑1 (MQ=255)
       tATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATc                                                                                              <  1:532580/100‑1 (MQ=255)
       tATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATc                                                                                              <  2:914695/100‑1 (MQ=255)
        aTCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCa                                                                                             >  2:574949/1‑100 (MQ=255)
        aTCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCa                                                                                             >  1:2548643/1‑100 (MQ=255)
        aTCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCa                                                                                             <  2:1559672/100‑1 (MQ=255)
         tCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAg                                                                                            >  1:3364187/1‑100 (MQ=255)
         tCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAg                                                                                            <  1:2067489/100‑1 (MQ=255)
          ccGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAgg                                                                                           >  1:833611/1‑100 (MQ=255)
          ccGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAgg                                                                                           <  1:2274473/100‑1 (MQ=255)
          ccGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAgg                                                                                           <  2:3144/100‑1 (MQ=255)
            gTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCg                                                                                         >  2:3292034/1‑100 (MQ=255)
            gTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCg                                                                                         >  2:877307/1‑100 (MQ=255)
            gTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGACGTTCTGAAGTGCTGCGTAGCTTCCTGGAAGATTAATCGGTAGGCCGGATCAGGc                                                                                          >  1:3388447/1‑99 (MQ=255)
                gATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAc                                                                                     >  1:2275646/1‑100 (MQ=255)
                atcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTAc                                                                                     <  2:356930‑M1/17‑1 (MQ=255)
                  tCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgc                                                                                   >  2:2394243/1‑100 (MQ=255)
                    gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgccg                                                                                 >  2:1475587/1‑100 (MQ=255)
                    gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgccg                                                                                 <  2:379181/100‑1 (MQ=255)
                    gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgccg                                                                                 >  2:1990017/1‑100 (MQ=255)
                      agcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCa                                                                               >  2:3195721/1‑100 (MQ=255)
                         gaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAccc                                                                            >  2:2016000/1‑100 (MQ=255)
                           agGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                                                                          <  1:985244/100‑1 (MQ=255)
                           agGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                                                                          <  1:1455385/100‑1 (MQ=255)
                            ggCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGTCGCACCCGGc                                                                         <  2:1823835/100‑1 (MQ=255)
                            accaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGc                                                                         >  2:1726440‑M1/72‑100 (MQ=255)
                                cTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGCTCCGCCGCACCCGGCACTa                                                                     >  1:3220667/1‑100 (MQ=255)
                                  gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg                                                                   <  1:2194672/100‑1 (MQ=255)
                                   cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                  >  2:834093/1‑100 (MQ=255)
                                   cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                  <  2:3097655/100‑1 (MQ=255)
                                     cAAACTGCGTCACACGAGCCGTTCTGAAGTGATGCGTAGCTTGCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGccc                                                                >  2:2288886/1‑100 (MQ=255)
                                        aCTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctct                                                             <  2:653171/100‑1 (MQ=255)
                                         cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                            <  1:1042542/100‑1 (MQ=255)
                                         cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                            >  2:1444200/1‑100 (MQ=255)
                                           gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGACACTAGGCCCTCTGca                                                          <  1:617905/100‑1 (MQ=255)
                                           gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATAGGTAGGCAGGATCAGGCATTACGCAGCAACCGGAAAAAGGCACTCTGca                                                          >  2:1973141/1‑100 (MQ=255)
                                            cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                         >  2:1568389/1‑100 (MQ=255)
                                            cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                         <  1:1557575/100‑1 (MQ=255)
                                            cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                         >  2:2167107/1‑100 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAGCCGGCACTGGGCCCTCTGCACaa                                                       >  1:2721401/1‑99 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                      >  1:2562002/1‑100 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGACTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                      >  1:1849714/1‑100 (MQ=255)
                                                aCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAAc                                                     >  2:1352693/1‑100 (MQ=255)
                                                 cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTTGGCGATTAATCGGTAGGCCGGCTCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    <  1:2022910/100‑1 (MQ=255)
                                                 cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    >  2:3088181/1‑100 (MQ=255)
                                                 cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGCATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    >  1:1247060/1‑100 (MQ=255)
                                                  ccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    <  1:2022828/99‑1 (MQ=255)
                                                  ccGAGCCATTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGc                                                   >  2:1778157/1‑100 (MQ=255)
                                                   cGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGcc                                                  >  1:450517/1‑100 (MQ=255)
                                                    gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCa                                                 >  2:1467197/1‑100 (MQ=255)
                                                      gCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAcc                                               <  1:276225/100‑1 (MQ=255)
                                                       ccGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCt                                              >  1:1925057/1‑100 (MQ=255)
                                                       ccGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCt                                              >  1:1577721/1‑100 (MQ=255)
                                                       ccGTTCGGAAGTGCTGCGTAGCTTCCTGGACGATTAACCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAcc                                               <  1:3015066/99‑1 (MQ=255)
                                                        cGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCtt                                             >  1:2422414/1‑100 (MQ=255)
                                                         gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                            >  2:137339/1‑100 (MQ=255)
                                                            cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg                                         >  1:1422818/1‑100 (MQ=255)
                                                             tGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCgg                                        >  2:402757/1‑100 (MQ=255)
                                                             tGAAGTGCTGCGTAGCTTCCCGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCgg                                        <  1:2577317/100‑1 (MQ=255)
                                                              gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                       >  1:2156581/1‑100 (MQ=255)
                                                              gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                       <  1:2269190/100‑1 (MQ=255)
                                                              gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                       <  1:2467615/100‑1 (MQ=255)
                                                               aaGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTg                                      <  2:635706/100‑1 (MQ=255)
                                                                    ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                 <  1:2200464/100‑1 (MQ=255)
                                                                    ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                 >  2:2464317/1‑100 (MQ=255)
                                                                     tgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGttt                                <  1:1185970/100‑1 (MQ=255)
                                                                      gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttt                               <  1:1948949/100‑1 (MQ=255)
                                                                      gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttt                               >  2:2676952/1‑100 (MQ=255)
                                                                       cGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGttttt                              <  2:972923/100‑1 (MQ=255)
                                                                       cGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCGAAAAGGTGGCGtttgt                              <  2:2673475/100‑3 (MQ=38)
                                                                        gTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttttt                             <  2:1159215/100‑1 (MQ=255)
                                                                         tAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTa                            <  2:720316/100‑1 (MQ=255)
                                                                           gCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATc                          >  2:561167/1‑100 (MQ=255)
                                                                            cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATc                          >  1:1737819/1‑99 (MQ=255)
                                                                            cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCg                         <  1:3087375/100‑1 (MQ=255)
                                                                             ttCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGc                        <  2:918059/100‑1 (MQ=255)
                                                                             ttCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGc                        >  2:1709714/1‑100 (MQ=255)
                                                                              tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCTGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTAGCGACTTTTATCGc                        >  2:509713/1‑99 (MQ=255)
                                                                               ccTGGCCGATTACTAGGTAGGCCGGATCAGGTGTTTCGCCACACGCGGCACTAGGCCATCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGc                        <  1:3070751/98‑1 (MQ=255)
                                                                                 tGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCAc                    >  1:770977/1‑100 (MQ=255)
                                                                                  ggACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACg                   >  1:719088/1‑100 (MQ=255)
                                                                                   gACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGc                  >  2:2614842/1‑100 (MQ=255)
                                                                                   gACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGc                  >  2:1199312/1‑100 (MQ=255)
                                                                                    ncGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                 >  1:1400514/2‑100 (MQ=255)
                                                                                       aTTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTa              >  2:2717381/1‑100 (MQ=255)
                                                                                          aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCa           <  2:151590/100‑1 (MQ=255)
                                                                                          aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCa           >  1:1851796/1‑100 (MQ=255)
                                                                                           aTCGGTAGGCCTGATCAGGCGTTACGCCGCTCCCGTCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAg          <  1:1111357/100‑1 (MQ=255)
                                                                                                tAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCt     <  1:1990004/100‑1 (MQ=255)
                                                                                                  ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg   >  1:1983006/1‑100 (MQ=255)
                                                                                                   GCCGGATCAGGCGTTACGCCGCACTCTGCACTATGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt  >  1:2850158‑M1/1‑100 (MQ=255)
                                                                                                   GCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt  >  2:2489748‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGT  >  NC_000913/3214797‑3214995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.