New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4266888 =NA (NA)14 (0.120) 8/164 NT NA noncoding (1/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4266918 = NA (NA)noncoding (31/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 179 total aligned reads displayed.

ATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGA  >  NC_000913/4266790‑4266987
                                                                                                  |                                                                                                   
acagagtgagactcatgacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGc                                                                                                    >  1:127106‑M1/99‑100 (MQ=255)
 tGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGcc                                                                                                   <  1:379949/100‑1 (MQ=255)
 tGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGcc                                                                                                   >  2:2193466/1‑100 (MQ=255)
 tGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGcc                                                                                                   >  1:2014960/1‑100 (MQ=255)
  gACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGcc                                                                                                   <  2:1318841/99‑1 (MQ=255)
  gACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCg                                                                                                  >  2:427975/1‑100 (MQ=255)
  gACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCg                                                                                                  <  2:1128762/100‑1 (MQ=255)
  agagtgagactcatgacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCg                                                                                                  >  1:264614‑M1/97‑100 (MQ=255)
   gagtgagactcatgacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCgg                                                                                                 <  1:2250750‑M1/5‑1 (MQ=255)
   gagtgagactcataacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCgg                                                                                                 <  2:2276291‑M1/5‑1 (MQ=255)
    ngAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGa                                                                                                >  1:2450338/2‑100 (MQ=255)
    cGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGa                                                                                                >  1:3162132/1‑100 (MQ=255)
    cGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGa                                                                                                >  2:3230867/1‑100 (MQ=255)
    agtgagactcatgacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGa                                                                                                >  2:2086552‑M1/95‑100 (MQ=255)
         gTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATgcgg                                                                                           <  2:592019/100‑1 (MQ=255)
           aaGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATgcggcg                                                                                         >  2:3040781/1‑100 (MQ=255)
             gcgcTTACGAACTTATTACGCGCCTGATTTCAAGGGTCGCGATGTAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTg                                                                                       <  1:2742423/100‑1 (MQ=255)
             gcgcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTg                                                                                       <  2:1622730/100‑1 (MQ=255)
               gcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGaa                                                                                     >  1:3042882/1‑100 (MQ=255)
               gcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCAGAtcggaagagcg                                                                                     >  1:1200690/1‑90 (MQ=255)
                cTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAAt                                                                                    <  2:3119377/100‑1 (MQ=255)
                 ttACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATg                                                                                   <  1:985411/100‑1 (MQ=255)
                 ttACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGAGGCGGCGTGAATg                                                                                   <  2:2233646/100‑1 (MQ=255)
                  tACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATAGTCTGTGCCGGATGCGGCGTGAATGc                                                                                  >  2:1738290/1‑100 (MQ=255)
                   aCGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAAGCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGcc                                                                                 <  2:836408/100‑1 (MQ=255)
                    cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGGTTGTCTGTGCCGGATGCGGCGTGAATGcc                                                                                 >  2:1727854/1‑99 (MQ=255)
                    cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATgtct                                                                                >  1:1555898/1‑97 (MQ=255)
                    cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                >  2:218778/1‑100 (MQ=255)
                    cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                >  2:2250766/1‑100 (MQ=255)
                      aaCTTATTACGCGCCTGACTTCAAGGGGCGCGATGAAATACGTGGATTAAGCGTTCTGTAAGATTTGATTGTCTGTGCCGGATGCGGCGTGAATGcc                                                                                 <  1:2348368/97‑1 (MQ=255)
                       aCTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTAt                                                                             >  2:405447/1‑100 (MQ=255)
                       aCTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTAt                                                                             <  1:619676/100‑1 (MQ=255)
                         ttattaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATcc                                                                           <  2:2506200/100‑1 (MQ=255)
                         acatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATcc                                                                           >  1:428352‑M1/74‑100 (MQ=255)
                            ttaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        <  1:344661/100‑1 (MQ=255)
                            ttaCGCGCCTGACTTAAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTCGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        <  2:2544566/100‑1 (MQ=255)
                            tccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        >  2:1664657‑M1/71‑100 (MQ=255)
                            tccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        >  2:949074‑M1/71‑100 (MQ=255)
                             taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                       <  1:1041197/100‑1 (MQ=255)
                             ccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                       >  2:1083593‑M1/70‑100 (MQ=255)
                              aCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCa                                                                      <  2:242365/100‑1 (MQ=255)
                              aCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCa                                                                      <  1:2518606/100‑1 (MQ=255)
                               gccagaggcacgacctttataagagcatgagagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCaa                                                                     >  1:2615366‑M1/68‑100 (MQ=255)
                               cgcgCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCaa                                                                     >  1:3257798/1‑100 (MQ=255)
                                gcgcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAAt                                                                    <  2:2027860/100‑1 (MQ=255)
                                 cagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATa                                                                   >  1:2980330‑M1/66‑100 (MQ=255)
                                 cagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATa                                                                   >  1:218252‑M1/66‑100 (MQ=255)
                                    cTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaaa                                                                >  2:484291/1‑100 (MQ=255)
                                     tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                               <  1:1721422/100‑1 (MQ=255)
                                      gACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATc                                                              >  1:10229/1‑100 (MQ=255)
                                      gACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATc                                                              <  2:3309282/100‑1 (MQ=255)
                                        cTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             <  2:3360364/99‑1 (MQ=255)
                                        cTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCt                                                            <  2:1798182/100‑1 (MQ=255)
                                         ttCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTa                                                           >  1:3228746/1‑100 (MQ=255)
                                         cgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             >  1:2478946‑M1/58‑98 (MQ=255)
                                          tCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTCCCGGATGCGGGGTGAATGCCTTATCCGGCCAATAAAATCCTa                                                           >  1:2381386/1‑99 (MQ=255)
                                             aGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATAGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaaaa                                                       >  1:1872567/1‑100 (MQ=255)
                                              gggTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAAt                                                      <  2:2970052/100‑1 (MQ=255)
                                                 tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                   <  2:1237193/100‑1 (MQ=255)
                                                 tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                   <  2:2333233/100‑1 (MQ=255)
                                                  cgcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCaa                                                  >  1:28539/1‑100 (MQ=255)
                                                   gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                 >  1:2589518/1‑100 (MQ=255)
                                                   gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                 >  1:882013/1‑100 (MQ=255)
                                                    cgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATa                                                >  2:343197/1‑100 (MQ=255)
                                                      aTGAAATACGTGGATTAATCGTTCCGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAAGGCCTTTTCCGGCCAAAAAAAAAAAAAAAATTCa                                                   <  1:2033148/95‑1 (MQ=37)
                                                       tGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGt                                             <  1:1999660/100‑1 (MQ=255)
                                                        gAAATACGTGGATTAATCGTTCTGTAATAGTTGATCGGCTGTGCCACATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGtt                                            <  1:772089/100‑1 (MQ=38)
                                                         aaaTACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTg                                           <  2:2770543/100‑1 (MQ=255)
                                                            tACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATg                                        <  1:1511917/100‑1 (MQ=255)
                                                            tACGTGGATTAATCGTCCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATg                                        >  1:2831916/1‑100 (MQ=255)
                                                              cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                      <  2:2117672/100‑1 (MQ=255)
                                                                 ggATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCCATACGTTGATGTTCtt                                   >  1:1978057/1‑100 (MQ=255)
                                                                   aTTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTc                                 <  2:2360649/100‑1 (MQ=255)
                                                                    ttAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCa                                <  2:1010955/100‑1 (MQ=255)
                                                                    ttAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCa                                <  2:3064306/100‑1 (MQ=255)
                                                                    ttAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTGATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCa                                <  1:1099848/100‑1 (MQ=255)
                                                                      aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAACTTCAATATGTTGCTGTTCTTTCAt                               >  1:1630594/1‑99 (MQ=255)
                                                                       aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATCAGTTGATGTTCTTTCATGc                             >  1:1192427/1‑100 (MQ=255)
                                                                       aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                             <  1:1761565/100‑1 (MQ=255)
                                                                          gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          <  1:114802/100‑1 (MQ=255)
                                                                          gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGAGTGAATGCCTTATCCGGCCAATAAAATACTAAAAATTCAATAAGTTGATGTTCTTTCCTGctct                          >  2:654400/1‑100 (MQ=255)
                                                                           ttCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                         <  2:2880925/100‑1 (MQ=255)
                                                                           ttCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                         <  1:2394759/100‑1 (MQ=255)
                                                                            tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCTAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                        <  2:1355393/100‑1 (MQ=255)
                                                                               gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                     >  2:606599/1‑100 (MQ=255)
                                                                               gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                     >  2:3190866/1‑100 (MQ=255)
                                                                               gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                     >  2:612127/1‑100 (MQ=255)
                                                                                 aaTGTTTGATTGTCTGTGCCGGATTCGGCGTGAATGCTTTATCCGGCCAATAGAATCTTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTCTAAAg                   <  1:1311202/100‑1 (MQ=255)
                                                                                  atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                  >  2:1949562/1‑100 (MQ=255)
                                                                                  atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                  <  1:2797348/100‑1 (MQ=255)
                                                                                       tGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTg             <  1:510614/100‑1 (MQ=255)
                                                                                         aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc           <  2:895778/100‑1 (MQ=255)
                                                                                         aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc           >  2:2432018/1‑100 (MQ=255)
                                                                                           tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc         >  2:664287/1‑100 (MQ=255)
                                                                                            gTCTGTGCCGGATGCTGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc         <  2:281377/99‑1 (MQ=255)
                                                                                            gTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctct        >  1:2089102/1‑100 (MQ=255)
                                                                                               tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc     <  2:3345777/100‑1 (MQ=255)
                                                                                                gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg    <  2:1444762/100‑1 (MQ=255)
                                                                                                  GCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa  >  2:482174‑M1/1‑100 (MQ=255)
                                                                                                  GCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa  >  1:218778‑M1/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
ATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGA  >  NC_000913/4266790‑4266987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.