New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3619655 = | NA (NA) | 8 (0.070) | 6/168 | NT | 100% | coding (464/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3619677 = | 0 (0.000) | coding (486/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
GAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGT > NC_000913/3619579‑3619752 | accgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGc > 2:1404740‑M2/99‑100 (MQ=255) accgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGc > 2:2969360‑M2/99‑100 (MQ=255) ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc < 1:1128639‑M2/3‑1 (MQ=255) ccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGcc < 2:861344‑M2/3‑1 (MQ=255) cgagcagccaccacggcccctgtggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCg > 1:2239978‑M2/97‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCg < 1:1271998‑M2/4‑1 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCg > 2:2344927‑M2/97‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCg > 2:2213760‑M2/97‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacgtaagcggagttcttccggcagcgcctgccagagtgcggccaGcc < 1:1647398‑M2/3‑1 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg < 2:2406205‑M2/5‑1 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg < 2:2238337‑M2/5‑1 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg > 2:203727‑M2/96‑100 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCgg > 1:964223‑M2/96‑100 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaaacgtagttcttccggcagcgcctgccagagtgcggccaGCCgg > 1:2374088‑M2/96‑100 (MQ=255) gcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgactgccagagtgcggccaGCCgg < 1:1514412‑M2/5‑1 (MQ=255) gccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggaggtcttccggcagcgccttccagagtgcggcccgccggcgcc > 1:2952706‑M2/91‑95 (MQ=255) acggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGc < 1:1045825‑M2/16‑1 (MQ=255) gcggacttaagcggagttcttccggcagcgcctgccagagtgcggccaGCCGGACGGACTCCGCTTAAGTCCGCCTCGTTATCTGGCGACAAACAGTCCg > 1:3025698‑M2/49‑100 (MQ=255) tcttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgct > 1:2150827‑M2/32‑100 (MQ=255) cttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCTGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgctg > 1:2956778‑M2/31‑100 (MQ=255) cttccggcagcgcctgccagagtgcggccaGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGgctg > 2:887511‑M2/31‑100 (MQ=255) ccggcagcgcctgccagagtgcggccaGCCGGAAGGACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTc > 1:3309392‑M2/28‑100 (MQ=255) tccggcagcgcctgccagagtgcgGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTTGTGGCTGCTCGGt > 1:1313938‑M2/25‑100 (MQ=255) ccggcagcgcctgccagagtgcgGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTcggc > 1:618539‑M2/24‑98 (MQ=255) | GAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGT > NC_000913/3619579‑3619752 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |