New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3620220	NA (NA)	12 (0.100)	7/166	NT	100%	coding (1029/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 3620255	0 (0.000)					coding (1064/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620191‑3620354                                                                 |                                                                                                    cgcAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacct                                                                  <  1:289292‑M2/100‑36 (MQ=255)   cAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgt                                                                <  2:2565130‑M2/100‑38 (MQ=255)             tacGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGTCCccggtatgcatcctcgtaagtaaagctgcgcacctgtttgccactac                                                      <  2:1450450‑M2/100‑48 (MQ=255)                    aaaaataCCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcata                                               <  2:2287324‑M2/98‑55 (MQ=255)                           ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc                                        <  1:1321934‑M2/100‑62 (MQ=255)                           ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc                                        <  2:3245633‑M2/100‑62 (MQ=255)                           ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc                                        <  1:262808‑M2/100‑62 (MQ=255)                             ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgc                                      <  1:3142319‑M2/100‑64 (MQ=255)                             ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgc                                      <  1:1105167‑M2/100‑64 (MQ=255)                               ggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcca                                    <  1:32824‑M2/100‑66 (MQ=255)                               ggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcca                                    <  2:20011‑M2/100‑66 (MQ=255)                                                     acacGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagcc              >  2:3142346‑M2/1‑13 (MQ=255)                                                          atcaggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcctacaccaccgccagttcgccgcgtggcgtccagccatagc         <  1:2689104‑M2/96‑93 (MQ=255)                                                            ccggccccggtatgtatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgc       <  2:2277331‑M2/100‑95 (MQ=255)                                                             cggccccggtatttatcatcgtaagtaatgctgcgcacctgtttgccactactgtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:2689965‑M2/1‑5 (MQ=255)                                                             cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      <  2:51070‑M2/100‑96 (MQ=255)                                                             cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:475445‑M2/1‑5 (MQ=255)                                                             cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      <  2:196771‑M2/100‑96 (MQ=255)                                                             cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      <  2:1701062‑M2/100‑96 (MQ=255)                                                              ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     >  1:907090‑M2/1‑4 (MQ=255)                                                              ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     <  2:2852027‑M2/100‑97 (MQ=255)                                                                ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtgatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    >  1:1877551‑M2/1‑2 (MQ=255)                                                                ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:1258464‑M2/100‑99 (MQ=255)                                                                ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   >  1:766938‑M2/1‑2 (MQ=255)                                                                ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    <  1:2485022‑M2/99‑98 (MQ=255)                                                                 cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  <  1:645979‑M2/100‑100 (MQ=255)                                                                 cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  <  1:2136839‑M2/100‑100 (MQ=255)                                                                 cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggccctacaccaccgccactaccccgcgtggcggccagacatagcgcacc    <  1:939185‑M2/98‑98 (MQ=255)                                                                 |                                                                                                    CGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620191‑3620354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.