BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4094625	137 (1.110)	26 (0.230)	6/164	NT	17.1%	noncoding (310/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
*	?	NC_000913	= 4094687	NA (NA)	26 (0.230)	6/164	NT	17.1%	noncoding (372/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences

Only 100 of 240 total aligned reads displayed.

CCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCT  >  NC_000913/4094589‑4094786

ccTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGg                                                                                                    <  2:2830969‑M2/100‑2 (MQ=255)

ccTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGg                                                                                                    <  1:1407108‑M2/100‑2 (MQ=255)

    attgccgGATGCGGCACAAGTGCCTTATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGgc                                                                                                   <  1:3219493‑M2/94‑3 (MQ=255)

     aGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTATTGCCGACCCGTAGgccgga                                                                                               <  1:371163‑M2/100‑7 (MQ=255)

      ggCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGgccggat                                                                                              <  1:111918‑M2/100‑8 (MQ=255)

      ggCCGGATAAGGCACTTGTGCCGCACCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCTGTAGgccggat                                                                                              <  1:1664934‑M2/100‑8 (MQ=255)

       gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGGCCCGTAGgccggat                                                                                              <  2:1835763‑M2/99‑8 (MQ=255)

       gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAAA‑ACTGTTGCCGACCCGTAGGCCGGATa                                                                                             >  2:1490263/1‑100 (MQ=25)

          ggATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAgg                                                                                          <  2:2241416/100‑1 (MQ=35)

            aTAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGgcg                                                                                        <  1:1282/100‑1 (MQ=35)

               aGGCTCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGgc                                                                                         <  1:1490845/96‑1 (MQ=18)

               aGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGCTAAGGCGCTc                                                                                     >  2:785436/1‑100 (MQ=38)

               aGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTc                                                                                     <  1:1059723/100‑1 (MQ=38)

                    cTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                <  2:405137/100‑1 (MQ=255)

                    cTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                <  1:578888/100‑1 (MQ=255)

                     ttGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgccg                                                                               <  2:1046888/100‑1 (MQ=255)

                      tgtgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgccac                                                                              >  2:3017537/1‑98 (MQ=255)

                       gtgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCa                                                                             >  2:2227472/1‑100 (MQ=255)

                         gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATc                                                                           >  1:2386072/1‑100 (MQ=255)

                          ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCTGACCTGTAGgccggatgcggcacaagtgccttatcc                                                                          >  2:2391192‑M2/1‑73 (MQ=255)

                           cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCTGTAGgccggatgcggcacaagtgccttatccg                                                                         >  1:3342600‑M2/1‑72 (MQ=255)

                            gCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTATTGCCGACCTGTAGgccggatgcggcacaagtgccttatccgg                                                                        >  1:618810‑M2/1‑71 (MQ=255)

                             cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCTGTAGgccggatgcggcacaagtgccttatccggc                                                                       >  2:46593‑M2/1‑70 (MQ=255)

                             cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCTGTAGgccggatgcggcacaagtgccttatccggc                                                                       >  2:3145143‑M2/1‑70 (MQ=255)

                             cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGc                                                                       <  2:3240707/100‑1 (MQ=255)

                             cATCCGGCAATCAATGCCGGATGCGACGCTGTCGCGTCGTAGCAGGCCCACA‑ACTGTTGCCGACCCGTAGgccggatgcggcgcgagcgccttatccggc                                                                       >  1:22093‑M2/1‑70 (MQ=255)

                              aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTATTGCCGACCTGTAGgccggatgcggcacaagtgccttatccggcc                                                                      >  1:2593404‑M2/1‑69 (MQ=255)

                                ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTATTGCCGACCTGTAGgccggatgcggcacaagtgccttatccggccag                                                                    <  1:192653‑M2/100‑34 (MQ=255)

                                 cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtg                                                                   >  2:378965/1‑100 (MQ=255)

                                 cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtg                                                                   >  2:1938413/1‑100 (MQ=255)

                                 cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtg                                                                   >  2:1287375/1‑100 (MQ=255)

                                  ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtg                                                                   <  1:2769562/99‑1 (MQ=255)

                                   gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGtt                                                                 <  2:1808446/100‑1 (MQ=255)

                                   gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGtt                                                                 <  1:289198/100‑1 (MQ=255)

                                      agccatGCCTTATGCCAAGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTa                                                               <  2:1154123/95‑1 (MQ=17)

                                       tcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAcc                                                             <  1:796502/100‑1 (MQ=255)

                                         aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCcg                                                           >  1:1434757/1‑100 (MQ=255)

                                            gCCTGATGCGAAGCTGTCGCTTATTTTCAGGCCTTCA‑ACTTTTGCCGACCCGGAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAcc                                                             <  2:354587/95‑1 (MQ=21)

                                             ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTCGCCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggc                                                       >  1:1230703/1‑100 (MQ=255)

                                             ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggc                                                       <  2:215554/100‑1 (MQ=255)

                                             ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggc                                                       >  2:1992850/1‑100 (MQ=255)

                                              cggatgcgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGGTTTattattgtt                                                       >  2:2563971/3‑92 (MQ=25)

                                              cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggcg                                                      >  1:714744/1‑100 (MQ=255)

                                              cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggcg                                                      >  1:2677752/1‑100 (MQ=255)

                                              cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggcg                                                      <  2:1401304/100‑1 (MQ=255)

                                               ggatgcgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGGTTTattattgttt                                                      >  1:950281/2‑91 (MQ=21)

                                               ggatgcgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGGTTTagtattgtt                                                       >  1:328546/2‑91 (MQ=21)

                                                gATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGAc                                                    <  2:2309351/100‑1 (MQ=255)

                                                gATGCGACGCGGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCATAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGAc                                                    <  2:664135/100‑1 (MQ=255)

                                                 aTGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACt                                                   <  2:821669/100‑1 (MQ=255)

                                                     gACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCaaa                                               >  1:1241427/1‑100 (MQ=255)

                                                     gACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCaaa                                               >  2:241261/1‑100 (MQ=255)

                                                       cGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAt                                             <  2:1359104/100‑1 (MQ=255)

                                                       cGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAt                                             <  1:824349/100‑1 (MQ=255)

                                                        gCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtt                                            >  2:914338/1‑100 (MQ=255)

                                                           gTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGAGCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGGTGTTTACCCGCGGCGACTCAAAAtttct                                         >  1:2041635/1‑100 (MQ=255)

                                                           gTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttct                                         >  2:3231527/1‑100 (MQ=255)

                                                           gTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttct                                         >  2:1568014/1‑100 (MQ=255)

                                                            tCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctt                                        <  1:2636725/100‑1 (MQ=255)

                                                            tCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctt                                        <  1:1802921/100‑1 (MQ=255)

                                                             cgcgTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                       <  1:662916/100‑1 (MQ=255)

                                                              gcgTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctttc                                      <  1:2384483/100‑1 (MQ=255)

                                                               cgTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATttctttct                                     <  2:2029885/100‑1 (MQ=255)

                                                               cgTCTCATGAGGCTCACC‑ACTTTTCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                       <  1:2254427/98‑1 (MQ=21)

                                                                gTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcagatcg                                    >  2:944778/1‑94 (MQ=255)

                                                                gTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                    <  1:897614/100‑1 (MQ=255)

                                                                gTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                    <  1:3154632/100‑1 (MQ=255)

                                                                gTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                    <  1:1134551/100‑1 (MQ=255)

                                                                    tATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATaa                                >  1:2597297/1‑100 (MQ=255)

                                                                    tATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATa                                 <  1:2512781/99‑1 (MQ=255)

                                                                     attaGGCGTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctttc                                      <  1:550414/90‑1 (MQ=255)

                                                                     aTCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAg                               <  1:51076/100‑1 (MQ=255)

                                                                     aTCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAg                               >  1:1391054/1‑100 (MQ=255)

                                                                      tCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTATACCCGCGGCGACTCAAAATTTCTTTCTCATAAg                               >  2:1790226/1‑99 (MQ=255)

                                                                       cAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGcc                             >  1:182196/1‑100 (MQ=255)

                                                                       cAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGcc                             <  2:1698815/100‑1 (MQ=255)

                                                                       cAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGcc                             <  2:112332/100‑1 (MQ=255)

                                                                         ggCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCg                           >  2:3338323/1‑100 (MQ=255)

                                                                           ccTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCa                         >  2:3175870/1‑100 (MQ=255)

                                                                             tACA‑GCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACg                       <  2:866672/100‑1 (MQ=255)

                                                                             tACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACg                       >  2:2000903/1‑100 (MQ=255)

                                                                              aCA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGc                      <  2:1241431/100‑1 (MQ=255)

                                                                              aCA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGc                      >  2:1907935/1‑100 (MQ=255)

                                                                                   cTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCtctc                  >  2:341108/1‑100 (MQ=255)

                                                                                   cTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCtctc                  >  2:1004386/1‑100 (MQ=255)

                                                                                    tGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTcc                 >  2:2772807/1‑100 (MQ=255)

                                                                                     gTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCa                >  2:3056516/1‑100 (MQ=255)

                                                                                     gTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCa                >  2:2506852/1‑100 (MQ=255)

                                                                                     gTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCa                <  1:1595726/100‑1 (MQ=255)

                                                                                       tGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGc              <  1:3061103/100‑1 (MQ=255)

                                                                                       tGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGc              <  1:692049/100‑1 (MQ=255)

                                                                                       tGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGc              <  2:724656/100‑1 (MQ=255)

                                                                                       tGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGc              <  1:2364458/100‑1 (MQ=255)

                                                                                        cacGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGcc             >  1:197113/3‑100 (MQ=255)

                                                                                        cacGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCAGCGGCGACTCACACTCTCCTTCTCATATGCCCGCACGCtctcga                >  1:1580938/3‑95 (MQ=21)

                                                                                           gACCCGTAGGCTGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCAtt          <  1:999913/100‑1 (MQ=255)

                                                                                              ccGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGc       >  2:2620634/1‑100 (MQ=255)

                                                                                              ccGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGc       <  2:1609256/100‑1 (MQ=255)

                                                                                                gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTa     >  2:2712749/1‑100 (MQ=255)

                                                                                                  aGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTAcc   <  1:391993/100‑1 (MQ=255)

CCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACA‑ACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCT  >  NC_000913/4094589‑4094786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.