New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4557049 =129 (1.050)10 (0.090) 9/162 NT 8.4% coding (57/393 nt) iraD RpoS stabilzer after DNA damage, anti‑RssB factor
?NC_000913 4557077 = 100 (0.890)coding (85/393 nt) iraD RpoS stabilzer after DNA damage, anti‑RssB factor
Rejected: Frequency below cutoff threshold.

Only 100 of 153 total aligned reads displayed.

TCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCC  >  NC_000913/4556978‑4557176
                                                                                                   |                                                                                                   
tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                                     >  2:2842404/1‑100 (MQ=255)
tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                                     <  2:1857486/100‑1 (MQ=255)
tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                                     <  1:1830437/100‑1 (MQ=255)
tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                                     <  2:2085663/100‑1 (MQ=255)
 gccactcgggcatgcctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGAtct                                                                                                    <  1:1843750‑M1/30‑1 (MQ=255)
   ggAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcc                                                                                                  >  2:2741180/1‑100 (MQ=255)
    actcgggcatgcctgaaacaagtaatgacggtaatggcgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATctcct                                                                                                 >  2:3225129‑M1/68‑100 (MQ=255)
     aGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcctc                                                                                                <  2:627689/100‑1 (MQ=255)
     aGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcctc                                                                                                >  1:1458222/1‑100 (MQ=255)
      gTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCa                                                                                               >  2:1609116/1‑100 (MQ=255)
       tGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAc                                                                                              <  1:2004302/100‑1 (MQ=255)
       cgggcatgcctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAc                                                                                              >  2:1984273‑M1/65‑100 (MQ=255)
        gggcatgcctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCa                                                                                               >  1:2616050‑M1/64‑98 (MQ=255)
        gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                                             >  2:2002683/1‑100 (MQ=255)
        gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                                             >  2:2935711/1‑100 (MQ=255)
        gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                                             >  2:187719/1‑100 (MQ=255)
         cgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCActc                                                                                            >  1:486039/1‑100 (MQ=255)
           cAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCCATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtt                                                                                          >  1:2817839/1‑100 (MQ=255)
           cAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtt                                                                                          >  2:1326868/1‑100 (MQ=255)
             aaaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtttt                                                                                        >  1:494733/1‑100 (MQ=255)
             aaaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtttt                                                                                        >  1:1188636/1‑100 (MQ=255)
              aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                                       <  1:1103262/100‑1 (MQ=255)
               atgatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTa                                                                                      >  1:2312067/1‑100 (MQ=255)
                ctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATCGCCTCACTCTTTTTaa                                                                                     <  2:1340462‑M1/45‑1 (MQ=255)
                 gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                                                    <  2:1427830/100‑1 (MQ=255)
                 gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                                                    <  1:3373578/100‑1 (MQ=255)
                 gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                                                    >  1:2048667/1‑100 (MQ=255)
                   tgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtc                                                                                  <  2:117781/100‑1 (MQ=255)
                   aaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtc                                                                                  >  1:1340456‑M1/53‑100 (MQ=255)
                     cGACAATCACTTCAGGCTGTTTAACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtctc                                                                                <  2:36767/100‑1 (MQ=255)
                      gACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcc                                                                               >  1:12669/1‑100 (MQ=255)
                      gACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTAACTCTTTTTAATtctc                                                                                >  1:1260947/1‑99 (MQ=255)
                         aaTCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCa                                                                            >  1:2596513/1‑100 (MQ=255)
                           tCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCAtt                                                                          >  1:149810/1‑100 (MQ=255)
                               ttCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTACTCACTCTTTTTAATTCTCCTCATTCGGc                                                                      >  2:146972/1‑100 (MQ=255)
                                tCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCa                                                                     <  1:1703467/100‑1 (MQ=255)
                                   cgttttattgccTGAAATTTCAGGTAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTa                                                                  >  2:758750/11‑100 (MQ=38)
                                      tGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCg                                                               <  2:1021527/100‑1 (MQ=255)
                                       gTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGt                                                              >  1:1191238/1‑100 (MQ=255)
                                         tttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCa                                                            <  2:1816958/100‑1 (MQ=255)
                                         tttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCa                                                            >  1:542407/1‑100 (MQ=255)
                                            aCCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATAACCGTCAt                                                           >  1:1726896/1‑98 (MQ=255)
                                             ccTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTAc                                                        >  2:2747279/1‑100 (MQ=255)
                                             ccTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGACCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCAttcc                                                        >  2:1764078/1‑98 (MQ=255)
                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                      <  2:2185445/100‑1 (MQ=255)
                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                      >  1:892785/1‑100 (MQ=255)
                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                      >  2:857248/1‑100 (MQ=255)
                                                 aaaTTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGt                                                    <  2:1396297/100‑1 (MQ=255)
                                                 aaaTTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTCTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTg                                                     <  1:1804843/99‑1 (MQ=255)
                                                   gaattaaaaagagtgaggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGttt                                                  >  1:1340456‑M2/49‑100 (MQ=255)
                                                    tttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTc                                                 <  1:105499/100‑1 (MQ=255)
                                                     ttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCa                                                >  1:42816/1‑100 (MQ=255)
                                                     ttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCa                                                >  2:1804850/1‑100 (MQ=255)
                                                     ctCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCa                                                <  1:2858641/99‑1 (MQ=255)
                                                     attaaaaagagtgaggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCa                                                >  2:1843761‑M2/47‑100 (MQ=255)
                                                       cAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCaag                                              >  2:2858664/1‑98 (MQ=255)
                                                        aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                                             <  1:3241988/100‑1 (MQ=255)
                                                        aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                                             <  2:2679797/100‑1 (MQ=255)
                                                         ggCACTAAAACGTCATCGCTGCGTACATCGGTATGCAGCGAACACCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCa                                            >  1:1035355/1‑100 (MQ=255)
                                                         ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCa                                            <  2:2932158/100‑1 (MQ=255)
                                                         ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCa                                            >  2:962458/1‑100 (MQ=255)
                                                         ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATATCCTCACTCTTTTTAATTCACCTCAATCGGCATTACCGTCATTACTGGTTTCAGGCa                                            >  1:2288071/1‑100 (MQ=255)
                                                         ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGAGATCTCCTCACTCTTTTTAATTCTGCTCATTCGGCAGTACCGGCATTACTTGTTTCAGGCa                                            >  2:1470358/1‑100 (MQ=255)
                                                           cAATCAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATg                                          <  2:3177279/100‑1 (MQ=255)
                                                           cAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATg                                          >  1:975102/1‑100 (MQ=255)
                                                           cAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACAGTCATTACTTGTTTCAGGCATg                                          >  2:2026449/1‑100 (MQ=255)
                                                            aaTAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGc                                         <  1:2468749/100‑1 (MQ=255)
                                                                 aaCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAg                                    <  1:2181364/100‑1 (MQ=255)
                                                                  aggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGCCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGt                                   >  2:3225129‑M2/34‑100 (MQ=255)
                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                  <  1:1018186/100‑1 (MQ=255)
                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                  <  2:3253553/100‑1 (MQ=255)
                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                  <  1:2747256/100‑1 (MQ=255)
                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                  >  1:3248634/1‑100 (MQ=255)
                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                  >  1:790654/1‑100 (MQ=255)
                                                                    gagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTgg                                 >  2:2874177‑M2/32‑100 (MQ=255)
                                                                     agatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGc                                >  2:1424433‑M2/31‑100 (MQ=255)
                                                                     agatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGc                                >  1:241639‑M2/31‑100 (MQ=255)
                                                                      cATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa                               <  1:1863308/100‑1 (MQ=255)
                                                                      cATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa                               <  1:2326245/100‑1 (MQ=255)
                                                                      cATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa                               <  2:1187697/100‑1 (MQ=255)
                                                                           CTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGc                          >  2:382053‑M1/1‑100 (MQ=255)
                                                                            TGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa                         >  2:235801‑M1/1‑100 (MQ=255)
                                                                              CGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATa                       <  2:557589‑M1/100‑1 (MQ=255)
                                                                              CGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTAAGGCATGCCCGAGTGGCAAGTGCATa                       <  2:2256076‑M1/100‑1 (MQ=255)
                                                                              CGTAAATCGGTATGCAGCGAGCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCTTCATTACTTGTTTCACGCATGCTCGTGTGGCAAGTGCATa                       <  1:593784‑M1/100‑1 (MQ=255)
                                                                               gTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATaa                      >  2:3096227/1‑100 (MQ=255)
                                                                                 aaaTCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAAcc                    >  1:3183648/1‑100 (MQ=255)
                                                                                      ggTATGCAGCGATCTGCAAACGCTTTTTAATCCTCCTCATTCGGCATTAACGACGCTACGTGTATCAGGCATCCCCGAGGGGCAAGCGCCTAAACCgcgc               >  1:2634942/1‑100 (MQ=255)
                                                                                      ggTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGc               >  2:2503660/1‑100 (MQ=255)
                                                                                       gTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCg                  >  1:2993191/1‑96 (MQ=255)
                                                                                       gTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCg              <  2:1603902/100‑1 (MQ=255)
                                                                                       gTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCg              >  1:658436/1‑100 (MQ=255)
                                                                                       gTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCg              <  1:1145510/100‑1 (MQ=255)
                                                                                        tATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGa             >  1:3283623/1‑100 (MQ=255)
                                                                                            cagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaaa         >  2:1214927‑M2/8‑100 (MQ=255)
                                                                                            cagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaa          >  1:3027334‑M2/8‑99 (MQ=255)
                                                                                             agcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAAc        <  2:401066‑M2/94‑1 (MQ=255)
                                                                                              gcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACa       <  2:1398246‑M2/95‑1 (MQ=255)
                                                                                                gatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACatn     <  1:187719‑M2/97‑2 (MQ=255)
                                                                                                gatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACAtc     <  1:1048712‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCC  >  NC_000913/4556978‑4557176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.