| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,173,076 | C→A | 71.3% | pseudogene (287/442 nt) | gatC ← | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,173,076 | 0 | C | A | 71.3% | 199.0 / 101.2 | 126 | pseudogene (287/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): ref base C (21/16); new base A (46/43); total (67/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
ATGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACA > NC_000913/2172979‑2173174 | tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGcc > 2:284856/1‑100 (MQ=255) tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc < 2:1587583/100‑1 (MQ=255) tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc > 2:168076/1‑100 (MQ=255) tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc > 2:3327028/1‑100 (MQ=255) aaaTACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTg < 2:887257/100‑1 (MQ=255) tACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc < 2:2083700/100‑1 (MQ=255) aCCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATcc < 1:1040180/100‑1 (MQ=255) ccGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGACAAGCCCTGCTCCa > 2:2446247/1‑100 (MQ=255) ccGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCa > 1:1481051/1‑100 (MQ=255) ccGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc > 1:2494861/1‑98 (MQ=255) ccGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCa > 2:2369290/1‑100 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt < 1:2924982/100‑1 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt > 1:2045993/1‑100 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt < 2:3248824/100‑1 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt > 1:642899/1‑100 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt < 2:1362692/100‑1 (MQ=255) cAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGaa > 1:2068990/1‑100 (MQ=255) aGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAg < 2:3265878/100‑1 (MQ=255) aGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAg < 1:361140/100‑1 (MQ=255) aGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAg < 2:420058/100‑1 (MQ=255) gATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGc < 2:1209815/100‑1 (MQ=255) aTAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGcc > 1:3372836/1‑100 (MQ=255) aTAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGcc > 1:2571145/1‑100 (MQ=255) aaTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc < 1:613537/100‑1 (MQ=255) aaTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc < 2:2642017/100‑1 (MQ=255) ttGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCAt < 2:677500/100‑1 (MQ=255) tGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATa > 2:668970/1‑100 (MQ=255) gCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATAc < 2:2263505/100‑1 (MQ=255) aCCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATAcc > 2:2826764/1‑99 (MQ=255) cGATAATAATGCAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCACTGATCCATTGAAGCCACCATAccccc > 1:323079/1‑100 (MQ=255) gATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGGAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATAccc > 1:249481/1‑97 (MQ=255) taataaTGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGc < 1:3057453/100‑1 (MQ=255) taataaTGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGc < 2:2157517/100‑1 (MQ=255) ataatGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCtt > 1:3299855/1‑100 (MQ=255) taatGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTCATGGGAGAAACACCCTGATCCATTGAAGCCACCATACACCCGGCtat > 1:1667823/1‑98 (MQ=255) aatGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCtttt < 2:2586993/100‑1 (MQ=255) attaaaCCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTGACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCGCCATTCCCCCGGCTTTTa < 1:707740/97‑1 (MQ=255) atGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTa > 1:912899/1‑100 (MQ=255) tGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTaa < 1:1780428/100‑1 (MQ=255) gAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAAc > 1:1142626/1‑100 (MQ=255) aaaCCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACg > 2:2650948/1‑100 (MQ=255) ccGGGAATATTTTGCGGGGAGAAAACATGAATAAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGccc > 1:2717764/1‑100 (MQ=255) cGGGACTATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGcccc < 1:2557803/100‑1 (MQ=255) cGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGcccc > 2:2981486/1‑100 (MQ=255) ggAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCa > 1:1188657/1‑99 (MQ=255) ggAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAg < 2:775204/100‑1 (MQ=255) ggAATATGTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACACCGGGCTTTTAACGCCCAAg > 1:107940/1‑100 (MQ=255) gAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGc < 1:284855/100‑1 (MQ=255) gAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGc < 2:639993/100‑1 (MQ=255) atatTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCan < 1:1593347/100‑2 (MQ=255) tatTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCAtt > 2:2983426/1‑100 (MQ=255) ttttGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAg < 2:719204/100‑1 (MQ=255) ttGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgcc > 2:1324032/1‑100 (MQ=255) ttGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgcc < 1:1682847/100‑1 (MQ=255) gCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccgc > 1:3143260/1‑100 (MQ=255) gCGGGGAGAAAACCTGAATCAGTAACCAGGTAATAGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccgc > 1:1551691/1‑100 (MQ=255) cGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCTTGATCCATTGAAGCCACCATACACACGGCTTTTAACGCCCGAGCATTAgccgcc > 1:868827/1‑100 (MQ=255) cGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgcc > 1:246402/1‑97 (MQ=255) ggggAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCa > 2:106987/1‑100 (MQ=255) ggggAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCa > 2:106273/1‑100 (MQ=255) gaAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTgg > 2:777870/1‑100 (MQ=255) aaaaACTGAATCAGTAACCAGGTAAAGGGAGAAACGCCCTGATCCATTGAAGCCACCATCCACCCGGCTTTTAACGACCCAGCATTAGCCGCCAGTTggg < 1:678901/100‑1 (MQ=255) aaaCCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCTCAGCATTAGCCGCCAGTTggg > 2:1133403/1‑99 (MQ=255) aaaCCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGgt > 2:2997249/1‑100 (MQ=255) aaCCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGgtg < 1:2085047/100‑1 (MQ=255) ccTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGtgtg > 2:2125304/1‑100 (MQ=255) ccTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGtgtg < 2:2265443/100‑1 (MQ=255) cTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGc < 1:3104/100‑1 (MQ=255) cTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGc < 2:3372864/100‑1 (MQ=255) cTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGc > 2:1390100/1‑100 (MQ=255) cTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGc < 1:3039676/100‑1 (MQ=255) tGAATCAGTAACCAGCTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCa < 1:2979272/100‑1 (MQ=255) gAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCaa > 2:1720876/1‑100 (MQ=255) aaTCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCaaa < 1:2852654/100‑1 (MQ=255) cAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAACCAACCATACACCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCa > 1:564657/1‑100 (MQ=255) aGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCaa > 1:328706/1‑100 (MQ=255) aGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCaa > 2:105290/1‑100 (MQ=255) gTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAAt > 2:2095580/1‑100 (MQ=255) aaCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAg < 2:2909320/100‑1 (MQ=255) agcAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCAGACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGt > 2:2291390/3‑100 (MQ=255) ccAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAg > 1:2166920/1‑98 (MQ=255) cAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGttt > 2:560121/1‑100 (MQ=255) cAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGttt > 2:1665093/1‑100 (MQ=255) aGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTg > 1:503804/1‑100 (MQ=255) aGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATCAGCCGCCAGCTGGGTGTGCAAACCACTAGttt > 1:2722082/1‑99 (MQ=255) ggTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGc > 2:2702876/1‑100 (MQ=255) gTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGTCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCg < 1:122060/100‑1 (MQ=255) gTAATGGGAGAACCGCCCTGATCCATCGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCg > 1:2003157/1‑100 (MQ=255) tAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGt > 2:2294550/1‑100 (MQ=255) aaTGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTc > 2:2809981/1‑100 (MQ=255) aTGGGAGAACCGCTCTGATCCATTGAAGCCACCATACCTCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACTATTGGTTTGcacac < 1:1279878/100‑5 (MQ=255) tGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCACTAGCCGCCAGTTCGCCGTACACACCAATAGTTTGCGTcgc > 1:1392009/1‑100 (MQ=255) gggAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTcgcg > 2:233511/1‑100 (MQ=255) gggAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTcgcg < 2:1970198/100‑1 (MQ=255) ggAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGa > 2:2431014/1‑100 (MQ=255) ggAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGa > 2:464679/1‑100 (MQ=255) ggAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGCTGGGTGTGCAAACCAATAGTTTGCGTcgcg > 1:94476/1‑99 (MQ=255) gaACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATcc < 2:1814424/100‑1 (MQ=255) gaACAGCCCTCATCCATTGAAACCACCATACCCCCGGCTTTTAAAGCCCCAGCATTAGCCGCCAGTTGAGTGTGCAAACCAATAGTTTGCGTCGCGATcc < 1:1171426/100‑1 (MQ=255) ccGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCcaca < 2:2003170/100‑1 (MQ=255) | ATGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACA > NC_000913/2172979‑2173174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |