| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,782,883 | G→A | 25.3% | intergenic (‑157/+182) | ypjA ← / ← pinH | adhesin‑like autotransporter/pseudogene, invertase resolvase family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,782,883 | 0 | G | A | 25.3% | 284.8 / 99.9 | 160 | intergenic (‑157/+182) | ypjA/pinH | adhesin‑like autotransporter/pseudogene, invertase resolvase family |
| Reads supporting (aligned to +/- strand): ref base G (69/49); new base A (20/20); total (91/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.77e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
TGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTC > NC_000913/2782784‑2782981 | aaCATCAGCCCACAGGCACCAGACCAGGTGATTCATCCTGAAGCGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatgatg < 1:1282869/100‑1 (MQ=255) aCATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAAtgatga < 1:736472/100‑1 (MQ=255) aCATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAAtaatga > 1:1694419/1‑100 (MQ=255) aCATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAAtaatga < 2:3298414/100‑1 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGTCAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat > 1:740159/1‑100 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat > 2:313622/1‑100 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat < 2:1012823/100‑1 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat > 1:2550529/1‑100 (MQ=40) tCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGatat > 2:2895158/1‑100 (MQ=255) gCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTcc > 2:571617/1‑100 (MQ=255) ccACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGc > 2:1209832/1‑100 (MQ=255) cacaGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa < 2:1042117/100‑1 (MQ=255) cacaGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa > 1:364352/1‑100 (MQ=255) cacaGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa > 1:3303477/1‑100 (MQ=255) aGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATaa < 2:1195939/100‑1 (MQ=255) ggCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATAAAAGACATCATGATGAAATTATGATATTCCGCATAAg > 1:3101235/1‑100 (MQ=255) cACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGaa > 2:1987950/1‑100 (MQ=255) ccagaccggGGCATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGCTGAAATAATGATATTCCGCATAAGa > 1:1780017/1‑97 (MQ=14) ccagaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATg > 2:2689784/1‑100 (MQ=255) agaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAg < 1:1921760/100‑1 (MQ=255) ggggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCCAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCAtt > 1:2969609/1‑99 (MQ=255) ggggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAttt > 2:2069696/1‑100 (MQ=255) ggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAttttt > 1:2628280/1‑100 (MQ=255) ggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAttttt < 2:142034/100‑1 (MQ=255) ggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGAATAAGAATGAGGCAttt > 2:623649/1‑98 (MQ=255) gATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAtttttt < 2:1070300/100‑1 (MQ=255) tCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTaan < 2:1601061/100‑2 (MQ=255) tCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTaaa < 1:2601530/100‑1 (MQ=255) cATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc < 2:778692/100‑1 (MQ=255) cATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc > 1:2786037/1‑100 (MQ=255) cATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc < 2:3074661/100‑1 (MQ=255) ccTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa > 2:147253/1‑100 (MQ=255) cTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAg < 2:1631139/100‑1 (MQ=255) cTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAg < 2:2142683/100‑1 (MQ=255) tGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa > 1:3005270/1‑98 (MQ=255) gAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTg > 2:568024/1‑100 (MQ=255) gaCAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTg < 2:2601460/100‑1 (MQ=255) gaCAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTg > 2:493980/1‑100 (MQ=255) cAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGaa > 2:2936792/1‑100 (MQ=255) cAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGaa > 2:2461639/1‑100 (MQ=255) gcgcAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAg > 1:2100138/1‑99 (MQ=255) cgtaaGTGTATTGTTTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAgtg < 2:661230/97‑1 (MQ=255) cgcAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGaacgg > 1:1023303/1‑97 (MQ=255) cgcAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAgtg < 1:124259/100‑1 (MQ=255) gcAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAgtgt < 1:2938065/100‑1 (MQ=255) cAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGtgtg > 1:1267043/1‑100 (MQ=255) aaGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTgg < 2:2262760/100‑1 (MQ=255) aaGGGTATTGTGTTCACCGCTCATCAAAGACATCAGGATGAAAGGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTgg > 2:2700702/1‑100 (MQ=255) aGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGt < 1:493978/100‑1 (MQ=255) aGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGt < 1:90963/100‑1 (MQ=255) tgtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTg < 1:1633679/100‑1 (MQ=255) tgtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGGATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTg < 1:1413323/100‑1 (MQ=255) tgtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTg < 2:1664274/100‑1 (MQ=255) gtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTgg > 1:2243029/1‑100 (MQ=255) tATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTg < 1:1003289/98‑1 (MQ=255) tATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGa < 2:3183794/100‑1 (MQ=255) tATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGa < 2:2330972/100‑1 (MQ=255) aTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGAt > 2:3126775/1‑100 (MQ=255) aTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGAt > 2:549523/1‑100 (MQ=255) ttGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGGATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATa < 1:1987066/100‑1 (MQ=255) tgtgTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaa > 2:2587000/1‑100 (MQ=255) ntgtTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaa > 2:3138236/2‑100 (MQ=255) gtgtTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaa > 2:3270016/1‑100 (MQ=255) gtgtTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTTTTTTTTTTTTGCTGAAGTGTGGTTGGATaaa > 1:2435902/1‑100 (MQ=14) gtgtTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaa > 1:738701/1‑100 (MQ=255) gtTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTGATACGCAGTGCGCTGAAGTGTGGTTGGATaaaaa > 1:1775221/1‑100 (MQ=255) tCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCTCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAg < 2:3248071/100‑1 (MQ=255) tCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAg < 2:717497/100‑1 (MQ=255) tCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAg < 2:947960/100‑1 (MQ=255) ncACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAATTTCTTTGCGCTGAAGTGTGGTTGGATAAAAAAg > 1:2673244/2‑100 (MQ=17) cACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGt > 2:319354/1‑100 (MQ=255) aCCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTc < 2:3322830/100‑1 (MQ=255) aCCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTc < 1:387676/100‑1 (MQ=255) ccGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCa > 1:430661/1‑100 (MQ=255) cGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCaa > 2:3384167/1‑100 (MQ=255) cGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCaa > 1:973132/1‑100 (MQ=255) cGCTCATCAAAGACATCATGATGAAATGAAGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCaa < 1:1336289/100‑1 (MQ=255) tcatcaAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATcc < 1:292385/100‑1 (MQ=255) catcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 1:1461494/1‑100 (MQ=255) catcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 1:1518128/1‑100 (MQ=255) tcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACTCATTCCGCTGAAGTGCGGTTCGATAAAAAAGTCAATCCaat > 1:665975/1‑98 (MQ=17) tcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCAtt > 2:709294/1‑100 (MQ=255) caAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATCAAAAAGTCAATCGATTc > 2:1513106/1‑100 (MQ=255) caAAGACATCATGATGAAATGAGGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGATGAAGTGTGGTTGGATAAAAAAGTCAATCCATTc > 1:1512786/1‑100 (MQ=255) caAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTc > 2:190788/1‑100 (MQ=255) aGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAgg < 2:431691/100‑1 (MQ=255) aGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAgg < 2:408604/100‑1 (MQ=255) gACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGa > 2:1318239/1‑100 (MQ=255) gACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGa < 1:2736180/100‑1 (MQ=255) catcatGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAAGCCATTCAGGaaa < 2:2037754/100‑1 (MQ=255) catcatGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATATAAAAGTCAATCCATTCAGGaaa > 2:1667233/1‑100 (MQ=255) catcatGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGaaa < 1:214486/100‑1 (MQ=255) atcatGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAAt > 1:800144/1‑100 (MQ=255) atgatgAAATGATGATATTCCGCATAAGAATGAGGCATTTCTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACg > 2:2752432/1‑100 (MQ=255) atgatgAAATAATGATATTCCGCATAAGAATGATGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGGTAAAAAAGTCAATCCATTCAGGAAATACg > 1:2042296/1‑100 (MQ=255) gatgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACggg < 1:2321739/100‑1 (MQ=255) atgaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCATTCCATTCAGGAAATACGGGc < 1:2062715/100‑1 (MQ=255) tgaAATGATGATATTGCGCATAAGAATGAGGCATTTTTTAAAAGCAGTGCGCTGAGGGGAGAGTGGATAAAAAAGTCAATCAATTCAGGAAATaag > 1:3039231/1‑94 (MQ=21) tgaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCg < 1:3190269/100‑1 (MQ=255) gaAATGATGATATTCCGCATAAGAATGAGGCATGTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGt > 1:2036700/1‑100 (MQ=255) | TGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTC > NC_000913/2782784‑2782981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |