| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 265,418 | A→G | 55.9% | R42R (CGT→CGC) | ykfF ← | CP4‑6 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 265,418 | 0 | A | G | 55.9% | 62.6 / 150.7 | 132 | R42R (CGT→CGC) | ykfF | CP4‑6 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (32/26); new base G (42/31); total (75/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCC > NC_000913/265320‑265516 | tCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCAc < 2:2345811/100‑1 (MQ=255) cTGTACGGATGCCTGATGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGACTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATcgcg < 1:1976784/100‑1 (MQ=255) tGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGa > 1:211317/1‑100 (MQ=255) gTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGaa > 2:2408734/1‑100 (MQ=255) gTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGaa > 1:141699/1‑100 (MQ=255) cGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAacca > 2:1392275/1‑100 (MQ=255) ccTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGAc > 2:3306993/1‑100 (MQ=255) ccTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGAc < 2:3096214/100‑1 (MQ=255) cTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACg > 2:3119091/1‑100 (MQ=255) cTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACg > 1:3164275/1‑100 (MQ=255) cTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACg > 1:2658929/1‑100 (MQ=255) gAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGGCCATCCGGCCTTCAGTATCACGAACCACCAGACGGa > 1:203849/1‑100 (MQ=255) gAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGa > 2:800572/1‑100 (MQ=255) aGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGaa > 2:2473099/1‑100 (MQ=255) ggTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAg > 2:2712324/1‑100 (MQ=255) gTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGt > 2:784624/1‑100 (MQ=255) gTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGt < 1:800569/100‑1 (MQ=255) tGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTg > 2:265425/1‑100 (MQ=255) tGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTg < 1:799996/100‑1 (MQ=255) gCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGa < 2:1740105/100‑1 (MQ=255) gCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGa > 2:3327802/1‑100 (MQ=255) cGGATATAGCGGTTCAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCGGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGAc < 1:3242812/100‑1 (MQ=255) cGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGAc < 1:2566796/100‑1 (MQ=255) cGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGAc < 2:2881373/100‑1 (MQ=255) gATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTg < 2:2770720/100‑1 (MQ=255) ttccgatcttAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGcc < 1:2217227/92‑1 (MQ=255) tataGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGc > 2:2644545/1‑99 (MQ=255) ataGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGccc < 2:2084735/100‑1 (MQ=255) taGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCt > 2:2985127/1‑100 (MQ=255) gCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTgg > 2:3027405/1‑100 (MQ=255) gCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTgg < 1:1453161/100‑1 (MQ=255) gTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGgtcg > 1:2125927/1‑100 (MQ=255) gTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGgtcg > 2:1529704/1‑100 (MQ=255) gTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGgtcg < 1:2507157/100‑1 (MQ=255) tAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGccagatcggaa > 2:2217242/1‑91 (MQ=255) aggACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCt > 2:2301180/3‑100 (MQ=255) aaGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACGATCCGGCCTTCAGTATCGCGAACCAGCAGACGGAGGGGACTGCCCTGgtcgt > 1:625159/1‑98 (MQ=21) gACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTc < 2:2931813/100‑1 (MQ=255) gACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTc > 2:125387/1‑100 (MQ=255) aCCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCg < 2:3023773/100‑1 (MQ=255) aCCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCg > 2:530831/1‑100 (MQ=255) ccTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGa > 1:1124338/1‑100 (MQ=255) ccTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGa > 1:75207/1‑100 (MQ=255) ccTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGa < 1:3326416/100‑1 (MQ=255) cTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAg < 2:518390/100‑1 (MQ=255) cTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAg < 2:63901/100‑1 (MQ=255) cTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAg < 1:1741520/100‑1 (MQ=255) ttCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAgt > 1:15282/1‑100 (MQ=255) tCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAgtg < 1:3192662/100‑1 (MQ=255) cACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAgtgt < 1:1480978/100‑1 (MQ=255) ggCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCCCCAGACGGCAGTGACTGCCCTGGTCGTCTTCGAGTGTGata > 1:1588711/1‑100 (MQ=255) ggCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGata > 1:389832/1‑100 (MQ=255) ggCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGata < 2:1398624/100‑1 (MQ=255) ggCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGGCTTCGAGTGTGat > 1:1605153/1‑99 (MQ=255) gacATCCGGCTCATAGTTCCATGCCCGCCCGACCATCCGGCCTTCAGTATCACGAACCACCATCCGGAAGTGTGTGCCCTGGTCGTCTTCGAGtgtg > 1:1167928/3‑97 (MQ=25) gCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGatat > 1:1872450/1‑100 (MQ=255) ccGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGc > 1:914527/1‑99 (MQ=255) cGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTg < 2:1704836/100‑1 (MQ=255) cGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTg > 2:1344108/1‑100 (MQ=255) gCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGt < 2:1311982/99‑1 (MQ=255) cTCAAAGTCCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGCAGTGCCTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTa > 1:1094624/1‑99 (MQ=37) cAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGt > 1:349659/1‑100 (MQ=255) aaGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTgg < 1:120507/100‑1 (MQ=255) aGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGt < 2:455574/100‑1 (MQ=255) aGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCGTCGAGTGTGATATTGCTGTACGTgg > 1:112479/1‑99 (MQ=255) gTTCCATGCCCGTCAGACCAGCCGGCCTTCAGTATCGCGAACCACCAGTCGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTgg < 2:1670103/98‑1 (MQ=37) tCCATGCCCGCCAGACCAGCCGGCCTTCAGGATCGCGAACCACGAGGCGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAg < 1:1165683/99‑1 (MQ=37) ccATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTg > 2:1234350/1‑100 (MQ=255) ccATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTg < 1:2314499/100‑1 (MQ=255) cATGCCCGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACGGCCCTGGTCGTCTTCGAGTGTGCTATTGCTGTACGTGGTAGTg > 1:870946/1‑99 (MQ=255) cATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGa > 2:2132792/1‑100 (MQ=255) aaTGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGa > 2:212866/2‑100 (MQ=255) cccGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgc > 2:2617461/1‑100 (MQ=255) cGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgctt > 1:2508867/1‑100 (MQ=255) cGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgctt > 2:3266828/1‑100 (MQ=255) cGCCAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgct > 2:3149974/1‑99 (MQ=255) gCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttg > 2:2561749/1‑100 (MQ=255) ccAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttgc < 2:2939134/100‑1 (MQ=255) cAGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttgcg < 2:2222379/100‑1 (MQ=255) aGACCATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGCTAGTGACcgcttgcgc < 2:2369577/100‑1 (MQ=255) gACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttgcgct < 1:2737041/100‑1 (MQ=255) ccATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttgcgcttg < 2:3206028/100‑1 (MQ=255) ccATCCGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACcgcttgcgcttg < 2:2486287/100‑1 (MQ=255) cATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGt > 1:3140222/1‑100 (MQ=255) aTCCGGCCTTCAGTATCTCGCACCACCGGGCTGATTTGACTACCCTTTTCGTCTTCCAGTGTGCTATTGCTGTTCTTCGTACTGACcccttcagc > 1:374822/1‑91 (MQ=255) ccGGCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGtctc > 1:852106/1‑100 (MQ=255) ggCCTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCg < 1:885809/100‑1 (MQ=255) ccTTCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCggg > 2:1577581/1‑100 (MQ=255) ccTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCggg < 1:730179/100‑1 (MQ=255) cTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGt < 2:1523481/100‑1 (MQ=255) tCAGTATCGCGATCCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCggg < 1:2750005/97‑1 (MQ=255) tCAGTATCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGa > 2:428657/1‑100 (MQ=255) tCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGa < 2:1897095/100‑1 (MQ=255) aTCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGc > 1:543616/1‑100 (MQ=255) aTCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGc > 1:310227/1‑100 (MQ=255) aTCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGc > 2:2715580/1‑100 (MQ=255) aTCGCGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGc > 2:2650983/1‑100 (MQ=255) cACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGccc < 1:530828/100‑1 (MQ=255) cACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGccc > 2:1923573/1‑100 (MQ=255) cACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTACTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGccc > 2:35069/1‑100 (MQ=255) | TCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCATGCCCGCCAGACCATCCGGCCTTCAGTATCACGAACCACCAGACGGAAGTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCC > NC_000913/265320‑265516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |