| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,165,015 | T→A | 61.4% | D320V (GAT→GTT) | parC ← | DNA topoisomerase IV, subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,165,015 | 0 | T | A | 61.4% | 82.4 / 143.2 | 126 | D320V (GAT→GTT) | parC | DNA topoisomerase IV, subunit A |
| Reads supporting (aligned to +/- strand): ref base T (20/28); new base A (52/25); total (72/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.44e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.94e-02 | |||||||||||
Only 100 of 126 total aligned reads displayed.
CACCAGCCATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCAGATT > NC_000913/3164918‑3165111 | ccAGCCATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCggt > 1:1724905/1‑100 (MQ=255) aGCCATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACggtgg < 1:1012282/100‑1 (MQ=255) gCCATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCggtggt < 1:3313073/100‑1 (MQ=255) ccATTCGGAGAGGCTTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACggtggt > 1:2554935/1‑99 (MQ=255) cATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAg > 1:229858/1‑100 (MQ=255) cATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAg > 2:1498158/1‑100 (MQ=255) aTTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGc < 2:622182/100‑1 (MQ=255) aTTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCAAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGc > 2:815010/1‑100 (MQ=255) tCGGAGAGGATTTCCAGCAGGTTTTTTTTTTTTTTTTTACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTCGTAGCg > 1:2658145/1‑99 (MQ=255) cGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGAGGTAGCGaa > 1:2987264/1‑100 (MQ=255) ggAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTCAATACGATCCCCCTTTTCCCGAACGGTGGCAGCGa > 1:2285874/1‑98 (MQ=255) agagGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAGTACGATAGCTCTTTTCCAGATCGGTGGTAGCGAagag < 1:1810495/100‑1 (MQ=255) gagGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAgg > 1:3309028/1‑100 (MQ=255) gagGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAgg < 1:515951/100‑1 (MQ=255) agGATTTCNAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAgg > 2:3200044/1‑99 (MQ=255) agGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAggt < 1:2088549/100‑1 (MQ=255) ggATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACTATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAggtg < 2:2395142/100‑1 (MQ=255) ggATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGAGGTAGCGAaga > 1:90954/1‑96 (MQ=255) gATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAggtgg < 2:830327/100‑1 (MQ=255) gATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAggtgg < 1:1724155/100‑1 (MQ=255) aTTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAggtggt < 1:3144763/100‑1 (MQ=255) aTTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAggtggt > 2:394898/1‑100 (MQ=255) ttCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTtc < 1:723696/100‑1 (MQ=255) tCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTtca > 2:1759589/1‑100 (MQ=255) tCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTtca < 1:2061229/100‑1 (MQ=255) cagcagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTtcatc > 2:3322396/1‑100 (MQ=255) agcagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGGTAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTtcatca > 1:2795418/1‑100 (MQ=255) gcagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCAc < 1:34361/100‑1 (MQ=255) cagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCAcc > 1:572973/1‑100 (MQ=255) cagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCAcc < 1:1138158/100‑1 (MQ=255) cagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCAcc < 1:511675/100‑1 (MQ=255) cagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCAcc < 2:1509637/100‑1 (MQ=255) cagGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCAcc < 1:3351421/100‑1 (MQ=255) agGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCt < 1:2551021/100‑1 (MQ=255) ggTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTg > 2:1686203/1‑100 (MQ=255) ggTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGACAGCTCTCTTCCAGAACGGTGGTAGCGAAGAGGTCGTTCATCACCTg > 2:1668401/1‑100 (MQ=255) ggTTTTTCACCGACGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGATCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTg > 2:1668261/1‑100 (MQ=255) tttttCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGAt > 2:1583695/1‑100 (MQ=255) ttttCACCGCCGGACGACCATCCAGACCGCTCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTTGTAGCGAAGAGGTGGTTCATCCCCTGATc > 1:195732/1‑100 (MQ=255) tttCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATcc < 2:812909/100‑1 (MQ=255) ttCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCa < 1:575435/100‑1 (MQ=255) cACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCata > 2:105063/1‑100 (MQ=255) cACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCata > 2:1793190/1‑100 (MQ=255) cACCGCCGGACGACCATCCAGACCGATCATATTAAGGGTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCat > 1:1036245/1‑99 (MQ=255) cACCGCCGGACGACCATCCAGACCGATCATATTAAGGATAATACGAGAGCTCTTTTCCAGAACTGTGGTAGCGACGAGGTGGTTAATCACCTTATCCa > 1:1799417/1‑98 (MQ=255) aCCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCatat < 2:1756510/100‑1 (MQ=255) ccgccgGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATc > 2:3317180/1‑100 (MQ=255) ccgccgGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCAAAGAGGTGGTTCATCACCTGATCCATATc > 1:786197/1‑100 (MQ=255) gacgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCAcgcg < 1:1427377/100‑1 (MQ=255) cgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGt < 1:1312760/100‑1 (MQ=255) cgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGt > 1:1980419/1‑100 (MQ=255) cgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGt > 1:3376343/1‑100 (MQ=255) cgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGt > 2:3134016/1‑100 (MQ=255) cgacCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGt > 2:1203445/1‑100 (MQ=255) acCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTg < 1:1272497/100‑1 (MQ=255) acCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTg < 1:2125971/100‑1 (MQ=255) ccATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTgg > 1:560275/1‑100 (MQ=255) cATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGa > 1:870773/1‑100 (MQ=255) tCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAAc > 1:1307710/1‑100 (MQ=255) ccAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAAcg < 2:1519719/100‑1 (MQ=255) cAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAAcgc > 2:103159/1‑100 (MQ=255) gACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCgg < 2:2258679/100‑1 (MQ=255) gACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCgg > 1:189914/1‑100 (MQ=255) gACCGAAGAGATGAAGGTTAATACGATAGCTCTTTTCCAGAGCGCTGGTAGCGAAGAGGTGGTGCATCACCTGATCCATATCCACGCGGTTGGAACGCgg < 1:1815658/100‑1 (MQ=255) cGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGcac > 1:379316/1‑100 (MQ=255) cGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGcac < 1:1924296/100‑1 (MQ=255) tCATATTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAAt > 1:1591329/1‑100 (MQ=255) atatTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGACGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCa > 2:1998590/1‑100 (MQ=255) tatTAAGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCAc < 2:1185835/100‑1 (MQ=255) atTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCAcc < 2:3010917/100‑1 (MQ=255) ttAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCa < 2:2353873/100‑1 (MQ=255) aaGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAgg < 2:3156487/100‑1 (MQ=255) aaGGTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAgg > 2:2447338/1‑100 (MQ=255) aGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGc > 2:1191654/1‑100 (MQ=255) ggTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcg > 2:279311/1‑100 (MQ=255) gTTAATACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgg > 2:1949611/1‑100 (MQ=255) ttAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcggg < 1:1770288/100‑1 (MQ=255) tAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggt > 1:2544294/1‑100 (MQ=255) aTACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcg > 1:3142063/1‑100 (MQ=255) aTACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcg > 2:401592/1‑100 (MQ=255) tACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcgg > 1:959097/1‑100 (MQ=255) tACGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcgg > 1:959120/1‑100 (MQ=255) aCGATAGCTCTTTTCCAGAACGGTGGTAGTGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcggg < 1:697565/100‑1 (MQ=255) cGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcgggt < 2:2253239/100‑1 (MQ=255) cGATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcgggt < 2:3254068/100‑1 (MQ=255) cGACAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGcgggtcgggt < 1:2453813/100‑1 (MQ=255) gATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGtt > 1:1259298/1‑100 (MQ=255) gATAGCTCTTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGtt > 1:1740905/1‑100 (MQ=255) ctctTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACTCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTTTCGt > 2:1178283/1‑100 (MQ=255) ctctTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGt < 1:1527995/100‑1 (MQ=255) ctctTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGCTCTCGt > 1:2455303/1‑100 (MQ=255) ctctTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATACACGCGGTTGGAAAGCGGCACAATCACCAGGCGGGACGGGTTCTCGt > 1:387554/1‑100 (MQ=255) tctTTTCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTg > 2:1460363/1‑100 (MQ=255) ttttCCAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTgg > 1:1676832/1‑99 (MQ=255) tttCCAGATCGGTGGTAGCGAAGAGGTGGGTCATCACCTGATCCAGATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTc < 1:550430/100‑1 (MQ=255) ttCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCa > 2:2613807/1‑100 (MQ=255) ttCCAGATCGGTGGTAGCGAAGAGGTGGGTCAGCACCTGATCCATGTCCAGGCGGTTGGAACGTGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCa < 1:1162751/100‑1 (MQ=255) ccAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGCTTCTCGTGGTCAGa > 1:405754/1‑100 (MQ=255) cAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCAGAt < 2:512915/100‑1 (MQ=255) cAGAACGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCAGAt > 1:156111/1‑100 (MQ=255) | CACCAGCCATTCGGAGAGGATTTCCAGCAGGTTTTTCACCGCCGGACGACCATCCAGACCGATCATATTAAGGTTAATACGATAGCTCTTTTCCAGATCGGTGGTAGCGAAGAGGTGGTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCAGGCGGGTCGGGTTCTCGTGGTCAGATT > NC_000913/3164918‑3165111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |