| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,805,475 | T→C | 35.0% | N159S (AAT→AGT) | waaP ← | kinase that phosphorylates core heptose of lipopolysaccharide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,805,475 | 0 | T | C | 35.0% | 145.5 / 159.6 | 163 | N159S (AAT→AGT) | waaP | kinase that phosphorylates core heptose of lipopolysaccharide |
| Reads supporting (aligned to +/- strand): ref base T (45/61); new base C (31/26); total (76/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
Only 100 of 166 total aligned reads displayed.
TGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCAATCGGCA > NC_000913/3805376‑3805573 | gtgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt > 1:471759/1‑100 (MQ=255) gtgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt < 1:3140325/100‑1 (MQ=255) gCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTa > 1:510853/1‑100 (MQ=255) gCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTa > 2:149768/1‑100 (MQ=255) ccGATGCAGATCGATAACTAAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATc < 1:961256/100‑1 (MQ=255) cGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc < 1:2521635/100‑1 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCGAGTAAAGGGCAAATGAAGCAAAAAGTCGCAAATGTAACAGTCGCGGTGATTTATccc > 1:778567/1‑100 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATccc < 2:2591719/100‑1 (MQ=255) aTGCAGATCGATAACTGAAATTTTTAATTCGTCTTCCCGGCCAGTAAATGGCAAATGAAACAAAATGTGGCAAATGTAACAGTCGAGGTGATTTATCGCt > 1:2884280/1‑100 (MQ=255) aTGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCt < 2:2713511/100‑1 (MQ=255) gCAGATCGATAACTGAAATTTTTAATTCATTTTCCCGGCCAGTAAATGGAAAAAAAAACAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc < 1:1951918/100‑1 (MQ=255) cAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCa < 1:1427181/100‑1 (MQ=255) cAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCa < 2:759036/100‑1 (MQ=255) cAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCa > 1:2668978/1‑100 (MQ=255) aTCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTa < 2:2667195/100‑1 (MQ=255) cGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATg < 1:723200/100‑1 (MQ=255) cGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATg > 2:1103077/1‑100 (MQ=255) cGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATg > 2:3284337/1‑100 (MQ=255) gATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGc > 1:1259558/1‑100 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGGGGCAAATGTAAAAGTCGCGGTGATTTATCCCTGCAGTATGCa > 2:1266504/1‑99 (MQ=255) aCTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATAGCAAATGAAACAAAAAGTGGCACGTGTAACAGGCGCGGGGATTTATacc > 1:2328133/1‑86 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCAtttt > 2:452836/1‑100 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCAtttt > 1:713125/1‑100 (MQ=255) tGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTa < 1:452834/100‑1 (MQ=255) gAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTAc < 1:1201598/100‑1 (MQ=255) aaaTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACg < 2:2342543/100‑1 (MQ=255) aaTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATTAAGCAAAAATTGGCAAATGTAACAGTCGAGGTGATGTATCCCTGCAGTATGTATTTTAc > 1:2496940/1‑98 (MQ=255) aaTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTa < 2:1300663/97‑1 (MQ=255) tttttAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCAc < 1:2071842/100‑1 (MQ=255) tttttAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCAc < 2:2402905/100‑1 (MQ=255) tttttAATTCATCTTCCCAGCCAGTAAATGGTAAATGAATTTAAAAGTGGCAAACGTAGCAGTCGCGGTGATTTATCCCTGCAGTATGCGTTTTACGc < 1:1837987/98‑1 (MQ=255) ttttAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCAcc > 1:1405713/1‑100 (MQ=255) ttttAATTCATCTGCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCAcc > 2:2301974/1‑100 (MQ=255) aTTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGt > 1:1597571/1‑100 (MQ=255) aTTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGt > 2:333172/1‑100 (MQ=255) ttCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGtt > 2:103551/1‑100 (MQ=255) tCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTg < 2:576709/100‑1 (MQ=255) cATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGc < 2:3371505/100‑1 (MQ=255) cATCTTCCCGGACAGTAAATGACAAATGAAGCAAAAAGTGGCAAATGTAAAAGTCGCGATGACTTATCACTGAAGTATGAATTTTACGCAAGATGGTTGc > 1:3075552/1‑100 (MQ=255) aTCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCt < 2:212343/100‑1 (MQ=255) aTCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCt < 1:1558962/100‑1 (MQ=255) aTCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCt < 1:2426689/100‑1 (MQ=255) tCTTCCCGGACAGTACATGGGAAATTAATCTAATAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTTTACATTTAACGCACCATAGtt < 1:748967/96‑1 (MQ=255) cTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTac < 2:678525/100‑1 (MQ=255) ttCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTaca < 2:858942/100‑1 (MQ=255) ttCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTaca < 2:539642/100‑1 (MQ=255) cccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACg > 2:2157645/1‑100 (MQ=255) ccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGt > 2:1157873/1‑100 (MQ=255) ccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGt > 2:615034/1‑100 (MQ=255) ggCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGc > 1:237368/1‑100 (MQ=255) gCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg < 2:2464844/100‑1 (MQ=255) gCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg < 2:1498470/100‑1 (MQ=255) cAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt > 2:1968428/1‑100 (MQ=255) aGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATc > 1:520781/1‑100 (MQ=255) gTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCa < 2:3358890/100‑1 (MQ=255) gTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCa < 2:480171/100‑1 (MQ=255) tAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCGACACGTGCGATCAg < 1:550083/100‑1 (MQ=255) aagtaggaaaGGAAGCAGAGGGTGGCAAATGTAACAGTCGCGGTGGTTGATCCGTGCAATCTGGAGTTGACGGATCATGGTTGCTACACGTGCGATCAgg < 1:133780/93‑2 (MQ=255) aaTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGcn < 2:2386215/100‑2 (MQ=255) aaTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCa < 2:14598/100‑1 (MQ=255) aTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCAGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTAAACGTGCGATCAGCAt < 1:2077102/100‑1 (MQ=255) tGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATa > 2:2866914/1‑100 (MQ=255) ggCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGAATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATAc > 2:2211071/1‑100 (MQ=255) gCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACg < 2:850448/100‑1 (MQ=255) cAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc < 2:3113386/100‑1 (MQ=255) aaaTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCt < 2:1873141/100‑1 (MQ=255) aTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 1:677004/100‑1 (MQ=255) aTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 1:1063740/100‑1 (MQ=255) tGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTaa > 1:1599483/1‑100 (MQ=255) gCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACg > 1:3320844/1‑100 (MQ=255) gCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACg > 1:1902881/1‑100 (MQ=255) aaaaaGTGGCGAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta < 1:2954132/100‑1 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta > 1:1105128/1‑100 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta < 2:2182437/100‑1 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta > 2:1578454/1‑100 (MQ=255) aaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGtata < 2:3166191/100‑1 (MQ=255) gTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCa < 2:2657514/100‑1 (MQ=255) ggCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAgg > 2:2832988/1‑100 (MQ=255) ggCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAgg < 2:903889/100‑1 (MQ=255) gacAAATGTAACAATCGCGGTGACTTATCCCAGCAGTATGCAGTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAgg > 2:2285365/3‑100 (MQ=255) gCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGc < 1:2994935/100‑1 (MQ=255) cAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCg > 1:2625788/1‑100 (MQ=255) cAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCg < 2:1599490/100‑1 (MQ=255) cAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCAGAGTTGCTACACGTGCGATCATCATGCGCTTAACACGTATATCAgg > 1:325751/1‑98 (MQ=255) aaaTGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCgg < 1:2140851/100‑1 (MQ=255) aaaTGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCgg > 2:2140866/1‑100 (MQ=255) aaTGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg < 2:2625808/100‑1 (MQ=255) aaTGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg < 2:2908582/100‑1 (MQ=255) aaTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg < 1:2699141/100‑1 (MQ=255) aaTGTAACAGTCGCAGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg < 1:2910697/100‑1 (MQ=255) tGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGtt < 2:1550269/100‑1 (MQ=255) aCAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACt < 1:817341/100‑1 (MQ=255) cAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTg > 2:1213986/1‑100 (MQ=255) cAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTg > 1:3203549/1‑100 (MQ=255) gTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGcc > 1:2780702/1‑100 (MQ=255) gTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGcc > 2:1338025/1‑100 (MQ=255) gcgGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCaa > 2:3388452/1‑100 (MQ=255) gcgGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCaa > 2:3237985/1‑100 (MQ=255) gTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCAATCg > 2:2537850/1‑100 (MQ=255) aTTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCAATCGGca < 1:1968415/100‑1 (MQ=255) | TGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCAATCGGCA > NC_000913/3805376‑3805573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |