| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,950,467 | G→T | 16.0% | intergenic (+47/‑40) | ilvL → / → ilvX | ilvG operon leader peptide/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,950,467 | 0 | G | T | 16.0% | 311.0 / 34.5 | 114 | intergenic (+47/‑40) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (42/53); new base T (13/6); total (55/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.75e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTA > NC_000913/3950368‑3950560 | tggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCggg‑g > 2:805353/1‑100 (MQ=255)tggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCggg‑g > 2:2329496/1‑100 (MQ=255) ggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCggg‑g > 1:1695301/1‑99 (MQ=255) gtaattattATCCCACAGTGCGGGGCTGCACTTGGCCGAGAAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCggg‑g < 1:2292972/95‑1 (MQ=255) tgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑ttt > 2:2968020/1‑100 (MQ=255) gATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTCACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑tttt > 2:1405556/1‑100 (MQ=255) gATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑tttt < 2:662167/100‑1 (MQ=255) ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTACGGG‑G‑Ctttt > 2:2482748/1‑99 (MQ=255) tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑Ttttttt < 2:595587/100‑1 (MQ=255) tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑‑G‑G‑Gtttttttt < 2:1148548/100‑1 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑Ttttttttt < 1:805350/100‑1 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GG‑G‑GTTTTTTTTg < 2:2460014/100‑1 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTg < 1:2409390/100‑1 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAGCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑Ttttttttt > 1:1703706/1‑99 (MQ=255) ataccACGGTGCGGGGCTGCACTTGGACGAGGAACGGCTTAGAGATCAAGGCTTAACTAACTAAGCCCCCCGCGCAGAAAGGTCCGCG‑G‑TTTTTTCTTGa < 1:1474803/97‑1 (MQ=255) atCCCACCGTGCGGGGCTGCACTTAGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGa < 1:300763/100‑1 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGAc > 2:3012426/1‑100 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGAc > 1:2359614/1‑100 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGAc > 2:371941/1‑100 (MQ=255) cccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGAcc < 2:1433289/100‑1 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCt > 2:3005472/1‑100 (MQ=255) cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCtt > 1:1082756/1‑100 (MQ=255) cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCtt < 1:1674943/100‑1 (MQ=255) aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTa > 2:1392076/1‑100 (MQ=255) tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTaaaaa < 2:2134888/100‑1 (MQ=255) gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAAc < 2:1626563/100‑1 (MQ=255) gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATa > 2:491403/1‑100 (MQ=255) gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATaa > 1:1740829/1‑99 (MQ=255) gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑GTTTTTTTTGACCTTAAAAACATAAc < 1:1596425/100‑1 (MQ=255) cTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAAcc > 2:502529/1‑100 (MQ=255) tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑GTTTTTTTTGACCTTAAAAACATAACCg > 1:942250/1‑100 (MQ=255) gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCga > 2:2514956/1‑100 (MQ=255) aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACGAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCgagg < 2:2123023/100‑1 (MQ=255) cTTGGACGAGGAAAGGCGTAGAGATCAAGCCTTAACGAACGAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCgagn < 2:845411/99‑2 (MQ=255) ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCgaggag < 2:3082426/100‑1 (MQ=255) ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCgaggag < 1:143565/100‑1 (MQ=255) tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGc < 2:2709603/100‑1 (MQ=255) tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGc < 2:2049622/100‑1 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGATGAGCa > 1:358113/1‑100 (MQ=255) gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg > 2:895938/1‑100 (MQ=255) gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg > 2:355102/1‑100 (MQ=255) gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg > 2:1613200/1‑100 (MQ=255) aggAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa < 2:335584/98‑1 (MQ=255) aCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa < 2:888713/100‑1 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt > 2:2845314/1‑100 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt < 2:2911954/100‑1 (MQ=255) ggaaGGCTTCGAGAGCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg < 2:133016/98‑1 (MQ=255) gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg < 2:1766529/100‑1 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACTATGAAt > 1:182996/1‑99 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa > 1:1699905/1‑98 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa < 1:1127551/100‑1 (MQ=255) gCTGAGAGATCATGCCTTAACGAACTAGGACCCCCGCACCGAATGGGCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa < 1:2958836/99‑1 (MQ=255) cgtAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:262345/98‑1 (MQ=255) cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:2450674/100‑1 (MQ=255) ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa < 2:833518/100‑1 (MQ=255) ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAAACGAGGAGCAGACAATGAATAAc > 1:800963/1‑99 (MQ=255) agagATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 1:1178778/1‑99 (MQ=255) agaTCAAGCCTTAACGAACTAAGGCCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcac < 2:3168544/100‑1 (MQ=255) gaTCAAGACTTAACGAACTAAGACCCACGCACCGAAAGGTCCGAA‑G‑TTGTCTTTTGACCTTAAAAACATAACCGAGTAGTAGACAATGAATAACAGctta < 1:3171591/100‑4 (MQ=255) cttCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca < 2:2620721/98‑1 (MQ=255) tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaag > 1:2620701/1‑99 (MQ=255) cAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 2:1997280/1‑100 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACCGCACAAAATTc > 2:710079/1‑100 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 2:3246307/1‑100 (MQ=255) gCCTTAACGAACCAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc < 2:21107/100‑1 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 1:1933490/1‑99 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt > 2:3282265/1‑100 (MQ=255) cTTAACGACCGAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt < 2:1634627/99‑1 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt > 2:1708513/1‑100 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TCTTTTTTTGACCTTAAAAACTTAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:1841094/100‑1 (MQ=255) gaaactaactAAGCCCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 2:2644862/98‑1 (MQ=255) tAACGATCTAAGACCCCCGAACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:727755/99‑1 (MQ=255) aCGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc > 2:2181933/1‑100 (MQ=255) aCGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:1118156/100‑1 (MQ=255) tgAATTAAGGCCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:764308/98‑1 (MQ=255) cGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct > 2:2184030/1‑100 (MQ=255) cGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGATCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct > 1:1912429/1‑100 (MQ=255) gAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc > 2:316607/1‑100 (MQ=255) aaCTTAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:1117059/97‑1 (MQ=255) aCTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 2:1550764/1‑100 (MQ=255) aCTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 2:1869651/1‑100 (MQ=255) aCTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa > 1:2898225/1‑100 (MQ=255) cTAAGACCCCCGCACCGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTaaa > 1:1470076/1‑99 (MQ=255) cTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg < 1:39200/100‑1 (MQ=255) tgtgttccccGTACCGACAGGTCCGGGTT‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct < 1:2040269/90‑1 (MQ=255) tAAGACCCCCGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa > 2:2595936/1‑100 (MQ=255) gaaGACCCCCCCCCCAAAGGGTCGGGG‑G‑TTTTTTTTTGACATCAAAAACATAACCAAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa < 2:3199617/99‑1 (MQ=255) cccccGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg < 1:1110126/100‑1 (MQ=255) ccccGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 2:919527/100‑1 (MQ=255) cccGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTTTTTTTTTTTACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg > 1:2720088/1‑99 (MQ=255) cccGCACCGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa < 1:2398436/100‑1 (MQ=255) cccGCACCGAAAGGTCC‑GG‑G‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg > 1:338768/1‑97 (MQ=255) ccGAAAGGTCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa > 2:890204/1‑100 (MQ=255) ccGAAAGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa < 2:2528656/100‑1 (MQ=255) gAATGGTCCGGG‑G‑TGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCa < 1:1866541/89‑1 (MQ=255) aaGGTCCGGG‑GTTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaact < 1:2229990/100‑1 (MQ=255) aaGGTCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaacta < 2:1912442/100‑1 (MQ=255) aaGGGCCGGG‑T‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa < 1:1449860/96‑1 (MQ=255) gTCCGGG‑G‑TTTTTTTTTTTTTTTTATAACATAAACACGGCGCACACCATGGATAACAGCACAAAATTCGTGTTCTCACGCTTCCGGACGGGGaactagct > 1:501453/1‑100 (MQ=255) tCCGGG‑G‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACCGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAactaacta > 2:1974507/1‑100 (MQ=255) | TGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGG‑G‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTA > NC_000913/3950368‑3950560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |