| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,568,688 | C→A | 20.3% | intergenic (‑169/‑310) | mdtM ← / → yjiP | multidrug efflux system protein/pseudogene, transposase_31 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,568,688 | 0 | C | A | 20.3% | 373.5 / 85.1 | 164 | intergenic (‑169/‑310) | mdtM/yjiP | multidrug efflux system protein/pseudogene, transposase_31 family protein |
| Reads supporting (aligned to +/- strand): ref base C (63/66); new base A (19/14); total (83/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.04e-01 | |||||||||||
Only 100 of 166 total aligned reads displayed.
AGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAAT > NC_000913/4568589‑4568787 | ggCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCg > 2:2039433/1‑100 (MQ=255) gCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCgg > 2:1679856/1‑100 (MQ=255) cAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTACTCAACCACACTGCCTGTGAACACACAGACAGAGAGATACTTTCTGACTTCggg < 1:64666/100‑1 (MQ=255) aGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAgg > 1:2564277/1‑98 (MQ=255) ggTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCgg > 1:2583884/1‑97 (MQ=255) gagaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa > 1:2015015/1‑100 (MQ=255) gagaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa > 1:178505/1‑100 (MQ=255) aaGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATg < 1:1261715/100‑1 (MQ=255) aaGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATg > 2:441478/1‑100 (MQ=255) aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGt > 2:1233045/1‑100 (MQ=255) aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGt > 1:593007/1‑100 (MQ=255) aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGt > 1:350344/1‑100 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGta < 2:2909176/100‑1 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGta < 2:336984/100‑1 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGta > 1:548059/1‑100 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGta > 2:3088105/1‑100 (MQ=255) cAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATaa > 2:400511/1‑100 (MQ=255) gagaCTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAt < 2:813696/100‑1 (MQ=255) gaCTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTa < 2:2988819/100‑1 (MQ=255) cTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACa > 2:2544065/1‑100 (MQ=255) cTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACa > 2:3306092/1‑100 (MQ=255) cTGCAAATGTACTGAATGTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAc > 1:2394540/1‑99 (MQ=255) tGCAAATGTACTGAATTTCATGTAATCGACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACaa < 1:1923594/100‑1 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAAt < 1:36909/100‑1 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAAt > 1:1654286/1‑100 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAAt > 2:1896650/1‑100 (MQ=255) aaaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATa < 2:1584775/100‑1 (MQ=255) aaaTGTACTGAATTTCATGGAATCAACCACACTTCCTGTTAACACACAGACAGAGAAATACTTTCTGACTGCGGGTCAGAATGTATAACGATTACAAATa < 1:141227/100‑1 (MQ=255) aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAg > 1:2788411/1‑100 (MQ=255) aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAg < 2:2167129/100‑1 (MQ=255) aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAg < 2:2216558/100‑1 (MQ=255) aTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGt < 1:657030/100‑1 (MQ=255) tGTACTGAATTACATGTAATCACCCACACTGCCTGTAAACACACAAACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATACtc < 2:747561/100‑1 (MQ=255) gTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGAGTCAGAATGTATAACGATTACAAATAGtca > 1:539702/1‑100 (MQ=255) cTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGtcatca < 1:2887982/100‑1 (MQ=255) tGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAg < 1:2792791/100‑1 (MQ=255) tGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAg < 1:868383/100‑1 (MQ=255) gAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGc > 2:581550/1‑100 (MQ=255) aaTTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGca < 1:1523627/100‑1 (MQ=255) tCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACAtt < 1:2465001/100‑1 (MQ=255) tCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACAtt > 2:2705905/1‑100 (MQ=255) aTGTAATCAACCACACTGCCTGTGAACACACAGACAAAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTac > 2:2392695/1‑100 (MQ=255) tAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACAcc < 2:2942483/100‑1 (MQ=255) cAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCtt > 2:1003662/1‑100 (MQ=255) cAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGCCAGAATGTATAAACATTACAAATAGTAATCAGCACATTaca > 1:326954/1‑94 (MQ=255) aaCCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTg < 1:784064/100‑1 (MQ=255) aaCCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTg < 1:146271/100‑1 (MQ=255) aaCCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTg < 2:2803104/100‑1 (MQ=255) aCCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGa > 1:198892/1‑100 (MQ=255) cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAt > 2:2273019/1‑100 (MQ=255) cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAt < 2:1574950/100‑1 (MQ=255) cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAt < 1:104780/100‑1 (MQ=255) acacTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAACTAGTCATCAGCACATTACACCTCTTGAAtt < 1:1975167/100‑1 (MQ=255) acacTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAtt < 1:2518358/100‑1 (MQ=255) cacTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTg < 1:2744931/100‑1 (MQ=255) cTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGAt > 1:3229478/1‑100 (MQ=255) tGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATg < 1:2239124/100‑1 (MQ=255) gCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATgg > 1:465252/1‑100 (MQ=255) gCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATgg < 2:143196/100‑1 (MQ=255) gCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATgg > 2:1522764/1‑100 (MQ=255) ccTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATggg < 2:601443/100‑1 (MQ=255) ccTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATggg > 2:1268325/1‑100 (MQ=255) gtgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTg > 1:2947600/1‑100 (MQ=255) gtgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTg < 2:863828/100‑1 (MQ=255) gtgAACACACAGACAGAGAAATACTTTCTGACTTCGGGACAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTg > 1:1891288/1‑100 (MQ=255) tgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGc < 1:1793241/100‑1 (MQ=255) tgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGc > 1:13596/1‑100 (MQ=255) tgAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGc < 1:3305149/100‑1 (MQ=255) gAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCa < 2:2788434/100‑1 (MQ=255) aaCACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCAt < 1:1325043/100‑1 (MQ=255) cacaGACAGAGAAGTACTTTCTGCCTTAGGGTCAGAATGTATAACGATTCCAAATAGTCATCAGCACATTACACCTCTTGAATTGCTGGGTTACATCGa > 1:2096039/1‑99 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaa > 2:1872799/1‑100 (MQ=255) agacagaGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAat < 1:3335727/100‑1 (MQ=255) gacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata < 1:1159769/100‑1 (MQ=255) gacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata > 1:1955895/1‑100 (MQ=255) gacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata < 1:914437/100‑1 (MQ=255) gacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata < 1:1691004/100‑1 (MQ=255) cagaGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata > 2:2593302/1‑100 (MQ=255) gagaAATACTTTCTGACTTCGGGTCAGAATGTGTAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATaca > 2:3212889/1‑100 (MQ=255) gagaAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATaca > 2:2430793/1‑100 (MQ=255) gaAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACAcc > 1:2210834/1‑100 (MQ=255) aTACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTa < 2:1551306/100‑1 (MQ=255) aCTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAg < 2:256198/100‑1 (MQ=255) tttCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtg < 2:1469061/100‑1 (MQ=255) tttCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtg < 1:939088/100‑1 (MQ=255) ttgttGACTTGGGATCATAATGTATAACGATTACAAATATTCATCAGCACATTACACCTTGTGAATTGATGGGTTGCATAGCAATTATACACCTTAAgtg < 1:2081629/96‑1 (MQ=255) ttCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtgt < 1:572477/100‑1 (MQ=255) ttCTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtgt > 1:1592183/1‑100 (MQ=255) cTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTaa > 1:970903/1‑100 (MQ=255) cTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTaa > 2:1205534/1‑100 (MQ=255) cTGACTTAGGGTCAGAATGTATAACTATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTa < 1:1364852/99‑1 (MQ=255) cTGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTaa < 1:373800/100‑1 (MQ=255) tGACTTCGGGTCAGAATGTATAACGATTACAAATATTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 2:623762/100‑1 (MQ=255) tGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt > 1:54098/1‑100 (MQ=255) tGACTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 1:2966685/100‑1 (MQ=255) gACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAtt > 2:2877321/1‑100 (MQ=255) aCTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAtt > 1:1508448/1‑99 (MQ=255) cTTAGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAATTGTAATTaa > 1:3242167/1‑100 (MQ=255) tCGGGTCAGAATGTATAACGATTACAAATAGTCGTCAGCACATTACACCTCTTTAATTGATGTGTTGCATAGAAAATATACACCTTAAGTGTAATTaaaa < 1:3125387/100‑1 (MQ=255) cGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAAt > 1:1233373/1‑100 (MQ=255) | AGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAAT > NC_000913/4568589‑4568787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |