BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	36,231	T→C	100%	intergenic (‑69/+40)	caiD ← / ← caiC	carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	36,231	0	T	C	100.0%	485.4 / ‑6.7	141	intergenic (‑69/+40)	caiD/caiC	carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (64/76); minor base A (1/0); total (65/76)

Only 100 of 142 total aligned reads displayed.

TTGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTC  >  NC_000913/36134‑36326

ttGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAgcgt                                                                                               <  2:3049661/100‑1 (MQ=255)

  gCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGa                                                                                             >  2:1571716/1‑100 (MQ=255)

  gCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGa                                                                                             >  1:2535017/1‑100 (MQ=255)

   cGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACGACAACATCACTGCAAAAAATGCATATTGTTTTAGAGCGTGat                                                                                            >  1:2684832/1‑100 (MQ=255)

   cGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACAACAAAATCCCTGCAAAAAATTCATATTGTTTTAGAGCGTGa                                                                                             >  1:2685305/1‑99 (MQ=255)

   cGGGTAAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAAAAAAAAAAAAAAAAATGCATATTGTTTTAGAGCGTGat                                                                                            <  1:967869/100‑1 (MQ=255)

    gggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGTTTTTTAAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGat                                                                                            <  1:1545769/99‑1 (MQ=255)

    gggTCAGATGTAATGATTCACTCATGCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACAAAAAAAAAAAAAATGCATATTGTTTTAGAGCGTGat                                                                                            <  1:345492/99‑1 (MQ=255)

     ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta                                                                                          <  2:2932318/100‑1 (MQ=255)

        cAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATTCATATTGTTTTAGAGCGTGattat                                                                                         >  1:2516383/1‑98 (MQ=255)

         aGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAg                                                                                      >  1:2989550/1‑100 (MQ=255)

           aTGTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACAACAACATCCCTGCAAAAAATTCATATTGTTTTAGAGCGTGATTATTAGCt                                                                                    >  1:33461/1‑100 (MQ=255)

           aTGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCt                                                                                    <  2:2197304/100‑1 (MQ=255)

            tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                   >  2:1362063/1‑100 (MQ=255)

            tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                   >  2:2602426/1‑100 (MQ=255)

            tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                   >  2:3078727/1‑100 (MQ=255)

            tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                   >  2:838609/1‑100 (MQ=255)

            tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGAAAACATCCCTGCAAAAAATGCATCTTGTTTTAGAGCGTGATTATTAg                                                                                      >  1:1501534/1‑97 (MQ=255)

             gTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTATCTg                                                                                   >  1:232270/1‑99 (MQ=255)

              tAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGc                                                                                 >  2:1306507/1‑100 (MQ=255)

               aaTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCTGGGACGACAAAAAAAAAAAAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCa                                                                                <  1:2420962/100‑1 (MQ=255)

                aTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGTACGACAACATCCTTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCa                                                                                <  1:2771576/99‑1 (MQ=255)

                aTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGCGACGACAACATCCCTGCAAAAAATGCATCTTGTTTTAGAGCGTGACTATTAGCTGGCAg                                                                               >  1:1111429/1‑100 (MQ=255)

                  gATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAAAATACATGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAggg                                                                             <  1:2408244/100‑1 (MQ=255)

                   aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt                                                                            <  2:3344599/100‑1 (MQ=255)

                     tCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTGGCTGGCAGGGTAg                                                                          <  2:2049589/100‑1 (MQ=255)

                     tCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt                                                                            <  1:2054034/98‑1 (MQ=255)

                      cACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGt                                                                         <  2:321633/100‑1 (MQ=255)

                        cTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTc                                                                       <  2:2957066/100‑1 (MQ=255)

                          cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTccc                                                                     <  2:1580972/100‑1 (MQ=255)

                          cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTccc                                                                     <  2:2785772/100‑1 (MQ=255)

                           aTTCCTTTTCTCCATTTTTTTTTTTTTTTTTACGACAACATGCCTGCAAAAAATGCATATTGTTTTAGAGCGTGACTGTTAGCTGTCAGGGTATTTcctt                                                                    >  1:2909526/1‑98 (MQ=255)

                           aTTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCct                                                                    >  2:1200294/1‑100 (MQ=255)

                             tCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgc                                                                  <  2:1469073/100‑1 (MQ=255)

                               cTTTTCTCCATTTTTGCTTTTTCAGTGACGTCAACATCCCTGCAAAAAGTGCATATTGTTTTAGCGCGTGATTATTAGCTGGCAGGGTGGTTCCctgc                                                                  >  1:2779950/1‑98 (MQ=255)

                                 tttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGtt                                                              <  2:2534920/100‑1 (MQ=255)

                                   tctcCATTTTTTTTTTTTTTTTTACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGttt                                                             >  1:114818/1‑99 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGATAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            <  1:69411/100‑1 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            <  2:2833820/100‑1 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            <  1:1752644/100‑1 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            <  2:2377096/100‑1 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            <  2:3284772/100‑1 (MQ=255)

                                   tctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTc                                                            >  2:2025165/1‑100 (MQ=255)

                                    ctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCa                                                           >  1:2294783/1‑100 (MQ=255)

                                    ctcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCa                                                           <  2:114818/100‑1 (MQ=255)

                                     tcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTTATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCat                                                          <  1:1665857/100‑1 (MQ=255)

                                     tcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCat                                                          <  2:1022045/100‑1 (MQ=255)

                                      ccATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatt                                                         <  2:649399/100‑1 (MQ=255)

                                      ccATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAATTCCCTGCTGTTTCatt                                                         <  2:1505706/100‑1 (MQ=255)

                                       cATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCattt                                                        <  2:2938645/100‑1 (MQ=255)

                                        aTTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCattta                                                       <  1:3146108/100‑1 (MQ=255)

                                        aTTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCattta                                                       <  2:1736363/100‑1 (MQ=255)

                                        aTTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCattta                                                       >  2:3374713/1‑100 (MQ=255)

                                          ttttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttatt                                                     <  2:2392289/100‑1 (MQ=255)

                                           tttGCTTTTTCAGGGACGACAACATCCCTTCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttattt                                                    <  2:1568223/100‑1 (MQ=255)

                                             tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa                                                  <  2:2999462/100‑1 (MQ=255)

                                             tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGATGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa                                                  >  1:3294858/1‑100 (MQ=255)

                                             tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATCAGCTGGCAGGGTAGTTCCCTGCTGATTCATTTATTTCa                                                  <  1:2086530/100‑1 (MQ=255)

                                              gCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAg                                                 <  2:1397208/100‑1 (MQ=255)

                                              gCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAg                                                 <  2:1469905/100‑1 (MQ=255)

                                              gCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAg                                                 >  2:200954/1‑100 (MQ=255)

                                              gCTTTTTCAGGGACGACAACATACCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAg                                                 >  1:773689/1‑100 (MQ=255)

                                                tttttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAt                                               <  2:1639139/100‑1 (MQ=255)

                                                 ttttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAtt                                              >  1:3332169/1‑100 (MQ=255)

                                                  tttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttc                                             >  2:32977/1‑100 (MQ=255)

                                                   ttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttct                                            >  1:2167385/1‑100 (MQ=255)

                                                    tCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctn                                           <  1:784754/100‑2 (MQ=255)

                                                      aGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttc                                         >  1:2237131/1‑100 (MQ=255)

                                                      aGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttc                                         <  2:4022/100‑1 (MQ=255)

                                                       gggCCGACACCATACCTGCAAAAAATGCATCTTGTTTTAGAGCGTGATTCTTAGCTGGCAGGAGAGATCCCTGCTGTTTCCTTCATTTCCCAttcttgct                                        >  1:1287684/1‑100 (MQ=255)

                                                       gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct                                        >  1:747790/1‑100 (MQ=255)

                                                       gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct                                        >  2:2197199/1‑100 (MQ=255)

                                                       gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct                                        >  1:2809521/1‑100 (MQ=255)

                                                       gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct                                        <  2:2898880/100‑1 (MQ=255)

                                                       gggACGACAACATCCCTGCAAAAAATGCATATTGGTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct                                        >  2:824942/1‑100 (MQ=255)

                                                        ggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTa                                       <  2:212914/100‑1 (MQ=255)

                                                            gacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAatta                                   <  2:3197049/100‑1 (MQ=255)

                                                             ttgtcgtCCCTGAAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAattat                                  >  1:409402/7‑100 (MQ=255)

                                                             acaacaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAattat                                  <  2:1004006/100‑1 (MQ=255)

                                                             acaacaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGCTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAatt                                    >  2:2667060/1‑98 (MQ=255)

                                                                 cttCCCTGCAAAAATTGCCTATTGCTTTAGAGAGGGAGTATTAGATGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTTTTTCTGATTAtttt                               >  1:2064413/3‑99 (MQ=255)

                                                                 caTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTc                              >  1:3316633/1‑100 (MQ=255)

                                                                    cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTcccc                           <  2:609653/100‑1 (MQ=255)

                                                                    cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTcccc                           >  1:1179585/1‑100 (MQ=255)

                                                                     ccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCg                          >  1:1934195/1‑100 (MQ=255)

                                                                       tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGTTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAg                        <  1:2988004/100‑1 (MQ=255)

                                                                        gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc                       <  2:2709099/100‑1 (MQ=255)

                                                                        gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc                       <  2:2641876/100‑1 (MQ=255)

                                                                         aaaaaaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAg                        <  1:1890206/97‑1 (MQ=255)

                                                                                tGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGt               >  2:2128786/1‑100 (MQ=255)

                                                                                tGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGt               >  2:1734864/1‑100 (MQ=255)

                                                                                tGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGt               <  1:535598/100‑1 (MQ=255)

                                                                                   atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTGTTTTCCCCGAGCAATTACGTGGc            <  1:1723560/100‑1 (MQ=255)

                                                                                   atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc            <  2:2989576/100‑1 (MQ=255)

                                                                                   atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc            <  2:1749101/100‑1 (MQ=255)

                                                                                      tttttttAGACCGTGATTATTTGCTGACAGGGTACTTCCCTGCTGTTTCATTTATTTCAAATTCTTTCTAATTATTTTCCCCTAGCAATTACGTgg             <  1:2590432/93‑1 (MQ=255)

                                                                                        gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc       >  1:2415861/1‑100 (MQ=255)

                                                                                        gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc       >  1:3061085/1‑100 (MQ=255)

                                                                                        gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc       <  1:898619/100‑1 (MQ=255)

                                                                                        gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCCTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc       <  1:1811741/100‑1 (MQ=255)

TTGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTC  >  NC_000913/36134‑36326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`