| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 575,915 | T→A | 16.9% | pseudogene (911/1040 nt) | nmpC ← | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 575,915 | 0 | T | A | 16.9% | 320.0 / 45.2 | 130 | pseudogene (911/1040 nt) | nmpC | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Reads supporting (aligned to +/- strand): ref base T (52/54); new base A (9/13); total (61/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 134 total aligned reads displayed.
ATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACGA > NC_000913/575816‑576014 | tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATcc < 1:236526/100‑1 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAAcc < 1:2392896/100‑1 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAAcc < 2:2971971/100‑1 (MQ=255) tGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCtt > 2:1442349/1‑100 (MQ=255) gTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTa > 1:1860559/1‑100 (MQ=255) tAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTAc < 2:2906128/100‑1 (MQ=255) tAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTAc < 2:2072795/100‑1 (MQ=255) aaTCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTAcc < 2:2893172/100‑1 (MQ=255) aTCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTAct > 1:3152392/1‑98 (MQ=255) aTCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCt > 1:6261/1‑100 (MQ=255) cAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTACACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCttt > 1:2080708/1‑100 (MQ=255) aaCGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTa < 2:2534773/100‑1 (MQ=255) aaCGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTa < 2:326780/100‑1 (MQ=255) aaCGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTa > 2:941041/1‑100 (MQ=255) gAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGAt > 1:1210301/1‑100 (MQ=255) gTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGc > 2:595602/1‑99 (MQ=255) gTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCa > 1:673197/1‑100 (MQ=255) tAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAg < 2:1264523/100‑1 (MQ=255) tAGACATATTTTTGTTGAAGTAATACGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAg < 1:2641336/100‑1 (MQ=255) aCATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTa > 2:2045203/1‑100 (MQ=255) cATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTaa < 2:1285454/100‑1 (MQ=255) atatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAg < 2:506688/100‑1 (MQ=255) tatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGc > 2:2158271/1‑100 (MQ=255) tatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGc > 2:2953214/1‑100 (MQ=255) atTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCa > 1:1014340/1‑100 (MQ=255) tttttGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCaa > 2:1478660/1‑100 (MQ=255) tgttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacgga > 1:970535/1‑100 (MQ=255) tgttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacgga > 1:1362128/1‑100 (MQ=255) gttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCACGTAAGCAacggac > 1:2889886/1‑100 (MQ=255) gttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACCCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggac > 1:809381/1‑100 (MQ=255) gatgAAGTAATAGATTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggac > 2:2301312/3‑100 (MQ=255) tgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggacgg > 1:864362/1‑100 (MQ=255) gAAGTAATAGGTTGCACCTACATCACCATATTTGACTAAGACCTGATCGCCCCATACTCCAAGATACTTACATATAGATTGCAGGTAAGCAAcggacgga > 1:2256712/1‑100 (MQ=255) gAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCGTACCTTTAGATTGCAGGTAAGCAAcggacgga < 2:2588289/100‑1 (MQ=255) aaGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCAGACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACggacggac < 1:1680491/100‑1 (MQ=255) gTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGc < 1:1529075/100‑1 (MQ=255) tAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCa < 1:3210499/100‑1 (MQ=255) aaTAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAg > 1:1730052/1‑100 (MQ=255) aTAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGa > 1:1835069/1‑100 (MQ=255) aGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGAcc < 1:1475271/100‑1 (MQ=255) ggTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCg > 1:447463/1‑100 (MQ=255) ggTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCg > 2:2535825/1‑100 (MQ=255) gTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGa > 1:2400138/1‑100 (MQ=255) aCCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCg < 2:441508/100‑1 (MQ=255) ccTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGa < 1:1539542/100‑1 (MQ=255) ccTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGa > 2:2974053/1‑100 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc < 2:3039789/100‑1 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAGCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc < 1:2760722/100‑1 (MQ=255) aCATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACt < 1:2995626/100‑1 (MQ=255) aCATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACt < 2:3389290/100‑1 (MQ=255) aCATCAACATAGTTGACTAAGTCCTGATCGCCCCATAGGACTTGACCCTTCCCTCTAGATTGCAGCTAAGCAACGGACGGACGCAGACCGAAAGCGAACt < 1:631967/100‑1 (MQ=25) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 1:1047917/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 2:1731235/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 2:2614033/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 2:681600/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg < 2:925356/100‑1 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 1:2039917/1‑100 (MQ=255) tCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGat > 1:3285542/1‑100 (MQ=255) cAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCCGACCGAAATCGAACTGata > 1:677139/1‑100 (MQ=255) aCATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATAtt > 1:1313066/1‑100 (MQ=255) cATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATtg < 2:79705/100‑1 (MQ=255) tatTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATtgtg < 1:2929815/100‑1 (MQ=255) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc > 2:1242183/1‑100 (MQ=255) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc < 1:1304061/100‑1 (MQ=255) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc < 1:1583168/100‑1 (MQ=255) tttGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCa < 1:1927066/100‑1 (MQ=255) ttGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCaa > 2:2867044/1‑100 (MQ=255) tGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAAc < 2:3326148/100‑1 (MQ=255) aCTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAg > 2:171792/1‑100 (MQ=255) tAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCt < 1:239907/100‑1 (MQ=255) aGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTc < 1:2494998/100‑1 (MQ=255) gTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCg > 2:711804/1‑100 (MQ=255) gTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCg > 1:2590610/1‑100 (MQ=255) tCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGa < 1:2740253/100‑1 (MQ=255) ncTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGAAAGCAACTGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGc > 1:2798486/2‑94 (MQ=37) ccTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGaa > 1:404179/1‑100 (MQ=255) cTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAg < 2:2244880/100‑1 (MQ=255) gATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGtt > 2:3106707/1‑100 (MQ=255) tCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGtttt < 1:538928/100‑1 (MQ=255) ctccccATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTg < 2:1903478/98‑1 (MQ=255) cGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTg < 1:1442343/100‑1 (MQ=255) gCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTgg > 1:2096803/1‑100 (MQ=255) ccccATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTggg > 2:2131958/1‑100 (MQ=255) ccccATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTggg < 1:3389015/100‑1 (MQ=255) cccATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGc > 2:1950884/1‑100 (MQ=255) ccATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCt < 2:173917/100‑1 (MQ=255) ccATACTCCAAGATCCTTACCTCTAGATTGCAGGTAAGCAACGGACTGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTgg < 1:2047448/97‑1 (MQ=255) cATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGGTATTGTGCAACAGCTTCGAAGTTTTGGGCtt < 1:2470765/100‑1 (MQ=255) cATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTgg < 1:164973/96‑1 (MQ=255) aCTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttat > 2:103141/1‑100 (MQ=255) aCTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGAAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttat < 2:2339843/100‑1 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt > 2:2848690/1‑100 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt < 1:3035318/100‑1 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt < 2:1362134/100‑1 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttat < 2:1992574/99‑1 (MQ=255) tCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatta < 2:3044012/100‑1 (MQ=255) ccAAGAACCTTACCTTTAATTTGCAGGTAAGCAACGGACGGCCGCAGATCGAAATTGAACTGATATTGTGCAACAGCTTCGGAGTTTTGGGCTttattan < 1:1475955/100‑2 (MQ=255) cAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGc < 1:1892491/100‑1 (MQ=255) aaGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCa > 1:2119211/1‑100 (MQ=255) aGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCaa > 1:3037616/1‑100 (MQ=255) | ATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACGA > NC_000913/575816‑576014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |