| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,470,558 | G→A | 55.9% | pseudogene (42/3497 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,470,558 | 0 | G | A | 55.9% | 34.2 / 126.3 | 104 | pseudogene (42/3497 nt) | ydbA | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base G (20/26); new base A (32/26); total (52/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGG > NC_000913/1470462‑1470656 | aaaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTaaaa > 2:1416597/1‑100 (MQ=255)aaaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTaaaa > 2:1434195/1‑100 (MQ=255) aaaCACCGAAAGAGATAATTGAAAGGGGTATTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGaaaa < 1:1528385/100‑1 (MQ=255) cacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATac < 1:1106110/100‑1 (MQ=255) acCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATaca < 1:1557338/100‑1 (MQ=255) acCGAAAGAGATAAGTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATaca < 2:2571505/100‑1 (MQ=255) ccGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa > 1:2510149/1‑100 (MQ=255) cGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaac < 2:1302940/100‑1 (MQ=255) gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaaca > 2:1053889/1‑100 (MQ=255) aaaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAg > 1:256207/1‑100 (MQ=255) aaGAGATAATTGAAAGGGGTGTTGCAGTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAgg < 1:2052275/100‑1 (MQ=255) gaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGtata > 1:333710/1‑100 (MQ=255) aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATaa < 2:831074/100‑1 (MQ=255) aTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATa > 1:1050101/1‑100 (MQ=255) ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTTTTTTTTTTTCTGGTAAAAATACAACAGGTATAAATAg > 1:119795/1‑100 (MQ=37) ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAg > 2:2084766/1‑100 (MQ=255) gAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAg < 2:1935267/98‑1 (MQ=255) gAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTg > 2:1722044/1‑100 (MQ=255) gAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTAACTGGTAAAAATACAACTGGTATAAATAGTg < 2:2279196/100‑1 (MQ=255) aaaGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTgg < 1:2265075/100‑1 (MQ=255) aGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCa < 2:1676683/100‑1 (MQ=255) aGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCa < 2:950206/100‑1 (MQ=255) gggTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACg > 1:1576417/1‑100 (MQ=255) ggTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGa > 1:3120246/1‑100 (MQ=255) tgtTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGAtc < 1:1416591/100‑1 (MQ=255) gtTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGAtc < 1:1072945/99‑1 (MQ=255) gtTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGAtc > 2:3079255/1‑99 (MQ=255) gtTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGAtct > 1:1158816/1‑100 (MQ=255) gtTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGAtct > 1:2339836/1‑100 (MQ=255) acATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGt > 2:68504/2‑100 (MQ=255) cATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGtt > 1:804013/1‑100 (MQ=255) cATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGtt < 1:2129336/100‑1 (MQ=255) cATTGACAAATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGt < 1:907620/99‑1 (MQ=255) aTTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGtta > 1:373900/1‑100 (MQ=255) aTTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGtta > 2:1108273/1‑100 (MQ=255) ttGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGttat > 1:2537361/1‑100 (MQ=255) ttGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGttat < 2:1158820/100‑1 (MQ=255) tGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGttatt < 2:2096257/100‑1 (MQ=255) gACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGttatta < 1:2636872/100‑1 (MQ=255) gACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGttatta > 1:1723615/1‑100 (MQ=255) cAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACa > 2:3251431/1‑100 (MQ=255) cAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACa < 1:450729/100‑1 (MQ=255) cAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACa > 1:1059815/1‑100 (MQ=255) gATTGAAGCTAGACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACCGGTATAAATAGTGGCACGATCTCGTTATTACaaa > 1:1775339/1‑100 (MQ=255) aTTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACaaaa > 1:900473/1‑100 (MQ=255) aTTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACaaaa > 2:235380/1‑100 (MQ=255) ttGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAAt < 1:726576/100‑1 (MQ=255) tGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATg > 1:1102753/1‑100 (MQ=255) tCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTaa < 1:1938919/100‑1 (MQ=255) tACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAg < 2:1870977/100‑1 (MQ=255) tACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTaaa > 1:2351143/1‑99 (MQ=255) acacTGTTGAACATCAGAATTTAGTCTTTGCTTTTGTTACTGGCAAACATACAACTGGTATAAATGGTGGCATGATCTCTTTATTAAAACCTGGTacata > 1:3074063/1‑96 (MQ=255) agtagtGAAATTCAGAATTTAGGTTTCTCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCATGATCTCGTTATTACAAAATGGTaaa < 1:3258932/91‑1 (MQ=255) acTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATc > 1:1796033/1‑100 (MQ=255) tGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCg < 2:1520420/100‑1 (MQ=255) tGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCg < 1:2240120/100‑1 (MQ=255) gTTGAAATTCAGAATTTAGGTTTTTTTTTTTTTTTTTGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCgg > 1:1563892/1‑100 (MQ=255) gTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAAGAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCgg < 2:1323395/100‑1 (MQ=255) ttGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGc < 1:2816473/100‑1 (MQ=255) tGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCa > 1:354094/1‑100 (MQ=255) gAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACGAAATGGTAAAGATCCGGCAc < 1:306170/100‑1 (MQ=255) gAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCAc > 2:1167146/1‑100 (MQ=255) gAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCAc < 1:1619652/100‑1 (MQ=255) aaaTTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCa < 1:2457695/98‑1 (MQ=255) aaTTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCg < 2:2510168/100‑1 (MQ=255) ttCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGtc > 2:2846435/1‑100 (MQ=255) ttCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGtc > 1:619373/1‑100 (MQ=255) ttCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGtc > 1:2949498/1‑100 (MQ=255) tCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGtct > 1:2199193/1‑100 (MQ=255) aGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTcc > 2:1871902/1‑100 (MQ=255) aGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTcc > 2:1871940/1‑100 (MQ=255) aGAATTTAGGTTTTGCTTGTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTcc < 2:3230159/100‑1 (MQ=255) tttAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCAtt > 2:1204674/1‑100 (MQ=255) ttAGGTTTTGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTg > 2:162465/1‑100 (MQ=255) tgaGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTg < 2:1825026/98‑1 (MQ=255) tcggTTTTGCTTTTGGTCATGGTAAAAATACAACAGGTATAATGAGTGGCACTATCTCGTTATAACAAGGTGGTAAAGATCCGGCACCGTCTCCCATTGt < 1:2794019/98‑1 (MQ=255) ttttGCTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTa < 2:342675/100‑1 (MQ=255) ttGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACt < 1:3079229/100‑1 (MQ=255) tGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTg < 2:1425332/100‑1 (MQ=255) gCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGGTCCGGCACCGTCTCCCATTGTTTTACTgg < 2:2839240/100‑1 (MQ=255) gCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTgg < 2:2839936/100‑1 (MQ=255) cTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGc < 2:2259104/100‑1 (MQ=255) cTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGc > 1:3226646/1‑100 (MQ=255) cTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGc < 1:90603/100‑1 (MQ=255) cTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGc < 2:1856251/100‑1 (MQ=255) cTTTTGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGc > 2:1680760/1‑100 (MQ=255) ttttGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGct < 2:3150076/100‑1 (MQ=255) ttGTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGctac < 1:1049456/100‑1 (MQ=255) gTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGctacta < 2:1745176/100‑1 (MQ=255) gTTACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGctacta > 2:96553/1‑100 (MQ=255) ttACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTaa < 1:2962087/100‑1 (MQ=255) tACTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTCAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAAc > 1:1042392/1‑100 (MQ=255) cTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACgg > 1:2117380/1‑100 (MQ=255) cTGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACgg > 1:1389104/1‑100 (MQ=255) tGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACgga < 1:2879021/100‑1 (MQ=255) tGGTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACgga < 2:732559/100‑1 (MQ=255) ggTAAAAATATAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCAGCACCGTCTCCCATTGTTTTACTGGCTACAAAc > 1:1290138/1‑96 (MQ=255) ggTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACggag > 2:1971324/1‑100 (MQ=255) ggTAAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACggag > 2:3319782/1‑100 (MQ=255) tGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACggaggg < 1:887765/100‑1 (MQ=255) | AAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGG > NC_000913/1470462‑1470656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |