| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 190,553 | Δ14 bp | coding (680‑693/726 nt) | rpsB → | 30S ribosomal subunit protein S2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 190552 | 1 (0.020) | 70 (1.100) | 55/196 | 0.1 | 98.6% | coding (679/726 nt) | rpsB | 30S ribosomal subunit protein S2 |
| ? | NC_000913 | 190567 = | 1 (0.020) | coding (694/726 nt) | rpsB | 30S ribosomal subunit protein S2 | |||||
ACGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190454‑190651 | aCGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCc < 2:335374‑M1/100‑2 (MQ=255) cGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCca < 1:948337‑M1/100‑3 (MQ=255) gtTCACTCCGTTATCCTGGCTAACGACCCGGCGCTCGTTACTGTGA‑CCATGTTCCTGGGACCTGTTGCTGCAACCGTACGTGAAGGCCGTtctccaggcg < 2:258740/100‑7 (MQ=255) ccgatctcgttatCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcg < 1:34435‑M1/93‑7 (MQ=255) gACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaa > 1:1001300‑M1/1‑91 (MQ=255) aCTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaag < 1:493392‑M1/100‑11 (MQ=255) aCTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaag < 2:637262‑M1/100‑11 (MQ=255) cTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaag > 1:879364‑M1/1‑90 (MQ=255) cTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaaga > 2:370120‑M1/1‑89 (MQ=255) cGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcgagatcgga > 2:34435‑M1/1‑86 (MQ=255) gTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagc > 1:160433‑M1/1‑85 (MQ=255) ttATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagct < 1:27945‑M1/100‑17 (MQ=255) aTCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttc > 2:488893‑M1/1‑82 (MQ=255) tCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcg > 1:809641‑M1/1‑81 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgt > 1:76035‑M1/1‑80 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgt > 1:543589‑M1/1‑80 (MQ=255) ccGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgta < 1:795269‑M1/100‑22 (MQ=255) cGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtag < 1:278797‑M1/100‑23 (MQ=255) ggTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaa < 1:946011‑M1/100‑25 (MQ=255) cgacgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 2:783539‑M1/1‑71 (MQ=255) cgacgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 2:423092‑M1/1‑71 (MQ=255) cgacgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 1:699505‑M1/1‑71 (MQ=255) acgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagt > 2:338460‑M1/1‑69 (MQ=255) cgacgCAATCCGTGCTGTGA‑CCCTGTGCCTGGGCGCTGGTGTTGCAACCGTACGTGAAGGCCGGTCTCcaggcggaagaaagcttcgtagaagctgagt < 2:698281‑M1/99‑32 (MQ=255) cgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagta < 2:509181‑M1/100‑33 (MQ=255) cgacgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagt < 1:550128‑M1/99‑32 (MQ=255) acgCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaa > 2:502641‑M1/1‑66 (MQ=255) gCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataa > 2:1201010‑M1/1‑64 (MQ=255) cAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataag > 2:1377365‑M1/1‑63 (MQ=255) aaTCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataagg < 2:1312474‑M1/100‑39 (MQ=255) aTCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggc > 2:195763‑M1/1‑61 (MQ=255) tCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggct < 1:1155432‑M1/100‑41 (MQ=255) ccGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt > 2:1431770‑M1/1‑59 (MQ=255) ccGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt < 1:265438‑M1/100‑42 (MQ=255) ccGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt > 2:703493‑M1/1‑59 (MQ=255) cGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg > 1:436580‑M1/1‑58 (MQ=255) cGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg < 2:1418434‑M1/100‑43 (MQ=255) gCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgata < 1:1390345‑M1/100‑46 (MQ=255) gCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgata < 2:1432330‑M1/100‑46 (MQ=255) gCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGAGAAGGCCGTTCTCcaggcgaaagaaagcttcgtagaagctgagtaataaggcttgata > 2:860171‑M1/1‑55 (MQ=255) cTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataa < 2:1525755‑M1/100‑47 (MQ=255) gA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcc < 2:809636‑M1/100‑51 (MQ=255) cccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccc < 1:1377373‑M1/100‑53 (MQ=255) cccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccc < 1:421973‑M1/100‑53 (MQ=255) gTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactccccgaaa > 2:651863‑M1/1‑44 (MQ=255) gTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaa > 2:891536‑M1/1‑44 (MQ=255) tACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaa > 1:691476‑M1/1‑43 (MQ=255) ccTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaata > 2:1473305‑M1/1‑41 (MQ=255) tGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagt > 2:37399‑M1/1‑39 (MQ=255) gggCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagtt > 1:238490‑M1/1‑38 (MQ=255) gcgcTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcg < 1:696611‑M1/100‑65 (MQ=255) cgcTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcga < 1:370120‑M1/100‑66 (MQ=255) cTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagt < 1:1289773‑M1/100‑68 (MQ=255) ttGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgc < 2:1513439‑M1/100‑71 (MQ=255) ttGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgc < 2:1096883‑M1/100‑71 (MQ=255) tgctgcAACCGTACGGGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgca < 2:307677‑M1/100‑72 (MQ=255) gctgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcag > 1:639377‑M1/1‑28 (MQ=255) tgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagtacgagttgcagaa < 1:1035564‑M1/100‑75 (MQ=255) cGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcgg > 1:1425301‑M1/1‑20 (MQ=255) gTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagc > 2:386831‑M1/1‑15 (MQ=255) tGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagct > 1:1580621‑M1/1‑14 (MQ=255) gAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctc > 2:198689‑M1/1‑13 (MQ=255) aaGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcg < 2:644123‑M1/100‑89 (MQ=255) aGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcga > 2:1262019‑M1/1‑11 (MQ=255) ccGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaa > 2:409917‑M1/1‑8 (MQ=255) ccGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaa < 1:326869‑M1/100‑93 (MQ=255) ccGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataacccccccaaagtagttcgagttgcagaaaggaggcaagctcgagaa > 2:1470408‑M1/1‑8 (MQ=255) gTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaatt > 1:818982‑M1/1‑6 (MQ=255) gTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAggcgg < 1:1147102/100‑1 (MQ=255) ctccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattccc < 1:488894‑M1/100‑98 (MQ=255) tccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccg < 1:651865‑M1/100‑99 (MQ=255) tccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccg < 2:216790‑M1/100‑99 (MQ=255) ccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccgg > 2:215046‑M1/1‑1 (MQ=255) | ACGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGA‑CCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190454‑190651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |