| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,275,682 | (A)5→4 | 100% | coding (401/1572 nt) | garD → | D‑galactarate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,275,678 | 0 | A | . | 74.4% | 324.7 / 183.5 | 160 | coding (397/1572 nt) | garD | D‑galactarate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (18/22); new base . (53/66); total (72/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 176 total aligned reads displayed.
CACACGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATACCCG > NC_000913/3275579‑3275776 | cacacGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCa > 1:1283402/1‑100 (MQ=255) cacGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaa > 1:1624049/1‑100 (MQ=255) cacGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaa > 2:279371/1‑100 (MQ=255) acGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaa < 1:3974977/100‑1 (MQ=255) cGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaac < 1:3152309/100‑2 (MQ=255) gCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaacc < 1:2699102/100‑3 (MQ=255) gCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaacc < 2:4052852/100‑3 (MQ=255) gCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaacc < 1:3406848/100‑3 (MQ=255) cTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAAcc < 1:370149/100‑1 (MQ=255) tGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaacctg < 1:1062457/100‑5 (MQ=255) tGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCaaaacctg < 1:3862275/100‑5 (MQ=255) gCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGc > 2:180925/1‑100 (MQ=255) gCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGc > 2:1164098/1‑100 (MQ=255) ccACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCt > 1:1264518/1‑100 (MQ=255) ccACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCt < 1:2521322/100‑1 (MQ=255) ccACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGCATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCt < 2:2666237/100‑1 (MQ=255) aCTGGCAACCAAAGTCCCGGAACGCTTAGCGGCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCATCGTGGGCACC‑AAAACCTGCTc < 2:641881/99‑1 (MQ=255) aCTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTc < 1:2496965/100‑1 (MQ=255) cTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCACTGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCg > 2:2962574/1‑100 (MQ=255) tGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCg < 2:632308/98‑1 (MQ=255) ggCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTa < 2:992502/100‑1 (MQ=255) gCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTAt > 1:1278888/1‑100 (MQ=255) cAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATc > 2:1312059/1‑100 (MQ=255) aaCCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATc > 1:3187494/1‑100 (MQ=255) aaCCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATca < 2:1943915/100‑1 (MQ=255) aaCCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATca < 2:3344325/100‑1 (MQ=255) aaCCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATca > 1:1575941/1‑100 (MQ=255) actaaaGTCCCTGAACCCTTACCGCCTCTGGAAGGATACACCTTTGACGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATc < 2:1979237/96‑1 (MQ=255) ctaaaGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATcac < 1:2148220/98‑1 (MQ=255) ccAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATGCACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATcac < 1:2931014/100‑1 (MQ=255) ccAAAGGCCCGGAACCCTTACCGCCACTGGAAGGATACACCTTTGAGCGCGATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATcacc < 2:1303478/100‑1 (MQ=255) cAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGTAGCGTGGGCACC‑AAAACCTGCTCGGTATcacca > 2:4121622/1‑100 (MQ=255) aaGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCaccacc < 2:1676317/100‑1 (MQ=255) aaGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCaccacc < 2:1908330/100‑1 (MQ=255) aaGTCCCGGAACCCTGACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCaccacc < 1:1864499/100‑1 (MQ=255) gTCCGGGAGCCCTTATCGCGGCTGGAAGGGGACAGGGGTGAGGGCTAGCGCAATGCCGATGGCAGCGTGGGGACC‑TAAACCTGCTCGGTATgactagc < 2:3651795/98‑5 (MQ=255) gTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAg < 2:3884305/100‑1 (MQ=255) tCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAg < 2:668607/100‑1 (MQ=255) cccGGCACGCTTACCGCCGCTATAAGGATACACCTTTGATGGCTATCGCAATGCCGATGACAGCGTCAGCACCAAAAAACTGCGCGGTATCAccacca > 2:1576393/1‑98 (MQ=255) cGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTc < 1:1212539/100‑1 (MQ=255) ggAACCCTTACGGCCGCTGGAAGGATACACCTTTGAGGGCTCTCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTcc < 2:1187721/100‑1 (MQ=255) ggAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTcc < 1:1820586/100‑1 (MQ=255) gAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTcc < 1:595587/100‑1 (MQ=255) aCCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCAc < 1:3275482/100‑1 (MQ=255) cccTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACtg > 1:1232161/1‑100 (MQ=255) ccTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACtg > 1:442699/1‑100 (MQ=255) ccTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACGACCAGCGTCCACtg > 1:1554544/1‑99 (MQ=255) ccTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACtgt > 1:346092/1‑100 (MQ=255) cTTACCCCCGCTGGAAGGATACACCTTTGAGGCCTATAGCAATGCCGGTGGCAGCGTGGGC‑CCGCAAAACTGCTCCGTATCACCACCAGCGTCCAc > 2:3667128/1‑96 (MQ=255) tACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCTCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACtgtgtg < 2:1606313/100‑1 (MQ=255) tACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AACACCTGCTCGGTATCACCACCAGCGTCCACtgtgcg > 2:3838110/1‑98 (MQ=255) tACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACtgtgtg > 2:374218/1‑100 (MQ=255) tACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACtgtgtg < 1:1212250/100‑1 (MQ=255) aCCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTgg > 2:3545707/1‑100 (MQ=255) ccgccgCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGc < 1:2636876/100‑1 (MQ=255) cgcTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAgg > 1:2017755/1‑100 (MQ=255) ggaggAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCg < 1:379804/97‑1 (MQ=255) cTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCg > 2:3516823/1‑100 (MQ=255) ggAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCgtgg > 2:4021514/1‑100 (MQ=255) aGGATGCCCCGTTGAGTGCTAGCGGCATGGCGATCGCACCTTGGGCACC‑AAAACGTGCTCGGTATCACCGCCAGGGTCCACTGTGTGGCAgg < 2:320057/92‑1 (MQ=255) aTACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGTAGGCGTGGTGGAc < 2:2582964/100‑1 (MQ=255) aTACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGAc < 1:1314067/100‑1 (MQ=255) aTACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACt > 2:3717557/1‑100 (MQ=255) acCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATgt < 2:518582/100‑1 (MQ=255) acCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATgt < 1:2903529/100‑1 (MQ=255) acCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATgt < 1:1358856/100‑1 (MQ=255) cTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACTTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATgtag < 1:2461826/100‑1 (MQ=255) gAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTaa < 1:3039392/100‑1 (MQ=255) gAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTaaa > 1:1182660/1‑100 (MQ=255) gCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAAt > 1:1038267/1‑100 (MQ=255) cTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCa > 2:3675607/1‑100 (MQ=255) cTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCa > 1:1862128/1‑100 (MQ=255) cTATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCa > 1:167034/1‑100 (MQ=255) tATCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCAt < 1:1753269/100‑1 (MQ=255) aTCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCAtt > 2:1303018/1‑100 (MQ=255) aTCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCAtt < 1:1658498/100‑1 (MQ=255) aTCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACGGTGTGGCAGGCGTGGTGGGCTATGTAGTAAAAATCAtt > 2:3095814/1‑100 (MQ=255) tCGCAATGGCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCAACTGTGTGGGAGGCGTGGTGGACTATGTAGTAAAAATCATTg < 2:1038034/100‑1 (MQ=255) tCGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTg > 1:88312/1‑100 (MQ=255) tCGCAATGCCGATGGCAGCATGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAGAATCAttc < 2:4061447/100‑2 (MQ=255) cGCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGa > 2:2787326/1‑100 (MQ=255) gCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGaa > 1:152273/1‑100 (MQ=255) gCAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGa > 1:374584/1‑99 (MQ=255) cAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTg < 2:2527571/98‑1 (MQ=255) cAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGaa < 2:2858673/100‑1 (MQ=255) cAATGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAAc > 1:860739/1‑100 (MQ=255) aaTGCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAAcg < 1:2263474/100‑1 (MQ=255) gCCGATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGa < 1:3616944/100‑1 (MQ=255) gATGGCAGCGTGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCt < 2:623364/100‑1 (MQ=255) ggCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTgn < 2:307904/100‑2 (MQ=255) tGGGCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGaaa < 1:51799/100‑1 (MQ=255) gggCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGaaa > 2:2709851/1‑100 (MQ=255) ggCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAAt > 1:1043113/1‑100 (MQ=255) ggCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATa < 2:3903725/100‑1 (MQ=255) ggCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATa > 2:1933932/1‑100 (MQ=255) ggCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATa > 1:2547530/1‑100 (MQ=255) gCACC‑AAAACCTGCTCGGTATCACTACGAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATTTAGTAAAAATCATTGAACGCGATCTGGTCCCGACAt > 2:3417741/1‑98 (MQ=255) gCACC‑AAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATAc < 2:3132009/100‑1 (MQ=255) cACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATAc < 1:927477/100‑1 (MQ=255) ccAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATAccc > 2:1376828/1‑100 (MQ=255) | CACACGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATACCCG > NC_000913/3275579‑3275776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |