| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,034,751 | Δ1 bp | 77.8% | coding (1498/1794 nt) | hyaB → | hydrogenase 1, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,034,750 | 0 | C | . | 77.8% | 337.9 / 137.9 | 135 | coding (1497/1794 nt) | hyaB | hydrogenase 1, large subunit |
| Reads supporting (aligned to +/- strand): ref base C (15/15); new base . (46/59); total (61/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
GCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACC > NC_000913/1034651‑1034849 | cAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAACCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGcg > 2:2666570/1‑99 (MQ=255) aGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTCCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGCGTGcg > 2:768731/1‑98 (MQ=255) gTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGcgtg < 2:3302438/100‑4 (MQ=255) gTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTACACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGcgtg < 2:3335808/100‑4 (MQ=255) tATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACGTGCAACCTGGCCGACAGAGTGcgtgg < 1:2537390/100‑5 (MQ=255) tATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCAATGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGcgtgg < 1:1712263/100‑5 (MQ=255) aTTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCgtgg < 2:1326767/100‑1 (MQ=255) aTTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑Cgtggt < 2:193940/100‑1 (MQ=255) aTTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑Cgtggt > 2:623344/1‑100 (MQ=255) tcttcGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGgtgt > 1:88965/1‑100 (MQ=255) tcttcGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTc < 1:3672509/100‑1 (MQ=255) cGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGttt > 2:897596/1‑100 (MQ=255) gACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGAAACCTGGCCGACAGAGTG‑CGTGGTGTCGGtt > 2:3213393/1‑99 (MQ=255) cAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTa < 1:976686/100‑1 (MQ=255) aaGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTa < 1:1762486/100‑1 (MQ=255) aaGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTa < 2:1531176/99‑1 (MQ=255) aaGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTAc < 2:2869801/100‑1 (MQ=255) aGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTAcc < 2:3732930/100‑1 (MQ=255) aGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTAcc < 1:855345/100‑1 (MQ=255) gCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGACAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTAcc < 1:1053827/99‑1 (MQ=255) gCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTAcc < 1:4006159/100‑1 (MQ=255) gCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCg > 1:2874263/1‑100 (MQ=255) cTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGa < 1:4082770/100‑1 (MQ=255) cTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGa < 2:264578/100‑1 (MQ=255) gatgaCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGaa > 1:826410/1‑100 (MQ=255) gatgaCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAg > 2:2619835/1‑100 (MQ=255) aCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTGTTACCGAAGcgcc > 2:2988694/1‑100 (MQ=255) ccAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGcgcc > 2:3575165/1‑100 (MQ=255) ccAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGcgcc > 1:1109069/1‑100 (MQ=255) ccAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGcgccg < 1:696440/100‑1 (MQ=255) ccAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGcgccg > 1:1575266/1‑100 (MQ=255) cAACGTGAGAAACGGCAATCTCGCCTCTGCTTCCACGGCAAACTGGGAACCTGCAACCTGGCCGCCAGAGTGCCGTGGTGGCGGTCTTACCGATGcgcc > 2:3383489/1‑99 (MQ=255) cAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGcgccgc > 2:2888431/1‑100 (MQ=255) cAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGcgccgc > 2:2936241/1‑100 (MQ=255) aaCCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCcgcg > 1:2187407/1‑100 (MQ=255) aCCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCcgcg < 2:1662193/100‑1 (MQ=255) aCCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCcgcgc > 2:1938964/1‑100 (MQ=255) ccTGAAAAACGGCAATCTCGGCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCcgcgcg > 2:2549514/1‑100 (MQ=255) tGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCggg > 2:3090395/1‑100 (MQ=255) tGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGCGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCgg > 1:3057167/1‑100 (MQ=255) gAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGCCAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCgggg > 2:838387/1‑100 (MQ=255) gAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGATTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCgggg < 1:2936258/100‑1 (MQ=255) gAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCgggg < 1:3780936/100‑1 (MQ=255) aaaaCGGCAATCTCGCCACTGCTTCCCCGGAAAAATGGGAACCTGCAACCTGGCCGCCAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCCCGCGGGGCg > 2:1598983/1‑100 (MQ=255) aaaaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGc > 1:1520911/1‑100 (MQ=255) aaaCGGCAATTTCGCCACTGCTTCCACGGAAAAATGGGATCCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCg < 2:3445008/99‑1 (MQ=255) aaaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCg > 1:533379/1‑100 (MQ=255) aaaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGt < 2:3740261/100‑1 (MQ=255) aaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGtt < 2:28458/100‑1 (MQ=255) aCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTa < 1:146450/100‑1 (MQ=255) aCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTa < 1:1202426/100‑1 (MQ=255) cGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAg > 1:3957217/1‑100 (MQ=255) cGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAg < 2:167366/100‑1 (MQ=255) cGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGCTTTACCGAAGCGCCGCGCGGGGCGTTAg > 1:3666078/1‑100 (MQ=255) gCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGc < 1:1060404/100‑1 (MQ=255) gCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGc < 1:3500246/100‑1 (MQ=255) cAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGcc > 1:2263209/1‑100 (MQ=255) cGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTggg < 2:431520/100‑1 (MQ=255) cGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTggg > 1:3780492/1‑100 (MQ=255) cGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTggg < 1:3412427/100‑1 (MQ=255) tGCTTCGCCGGAAAAATGGGCACCTGCAGCCGGGCCGGCAGGGTGCCGTGGTGTCGGTTTTACCGAAGCGGCGCGCGGGGCGTTGTGCCACTTGgtcgcc < 2:2480752/100‑1 (MQ=255) gCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACCGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCa > 2:807574/1‑100 (MQ=255) tCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTcg > 1:2379351/1‑100 (MQ=255) tCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTcg < 1:3590291/100‑1 (MQ=255) ccACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTcg < 1:3828397/100‑1 (MQ=255) cACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTcgcg < 1:2776798/100‑1 (MQ=255) cACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTcgcg < 1:2776855/100‑1 (MQ=255) cGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTGGGCCACTGGGCCGCCATTCGCGAt > 1:3382193/1‑100 (MQ=255) cGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGAt < 2:1052570/100‑1 (MQ=255) ggAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATg > 1:4115143/1‑100 (MQ=255) gAAAAATGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATgg < 1:404240/100‑1 (MQ=255) aaaaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATgg < 2:1732508/100‑1 (MQ=255) aTGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGa < 2:2327045/100‑1 (MQ=255) aTGGGAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGa > 1:2521422/1‑100 (MQ=255) ggAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTg < 2:1757435/100‑1 (MQ=255) ggAACCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTg < 2:2800401/100‑1 (MQ=255) aCCTGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGAtc < 1:1397363/100‑1 (MQ=255) ccTGCAACCTGGCCGCCAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGAtc < 1:2279099/99‑1 (MQ=255) ccTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGAtc < 1:1971180/100‑1 (MQ=255) tGCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATctct < 1:4117588/100‑1 (MQ=255) gCAACCTGGCCGACAGAGTGCCGTTGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATctct < 2:1434220/100‑1 (MQ=255) gCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTa > 2:2103284/1‑100 (MQ=255) gCAACCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTa < 2:3911030/100‑1 (MQ=255) catccTTGCCGCCAGAGTGCCGTGGCGTCGGCTTCACGCAGACGCCGCGCGGGACGTTAGTACACCGGGTTGCCAGTCGCGATGGCAAGATTGAtc < 2:1480422/93‑1 (MQ=255) aaCCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTAc > 2:3545913/1‑99 (MQ=255) aCCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTAcc > 1:3840975/1‑100 (MQ=255) aCCTGGCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCa > 1:498954/1‑100 (MQ=255) gCCGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCg < 2:2434246/100‑1 (MQ=255) ccGACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgt > 1:1867792/1‑100 (MQ=255) gACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtgg < 1:3222738/100‑1 (MQ=255) gACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtgg < 2:1243688/100‑1 (MQ=255) gACAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtgg < 1:2371143/100‑1 (MQ=255) cAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtggtg > 2:2691158/1‑100 (MQ=255) cAGAGTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtggtg < 2:2327084/100‑1 (MQ=255) gagTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGc > 1:1524997/1‑100 (MQ=255) gagTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgcgg > 2:1703191/1‑96 (MQ=255) gagTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGcc > 2:209317/1‑100 (MQ=255) gagTG‑CGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGcc < 2:2720544/100‑1 (MQ=255) ccGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCCCTGGGCCGCCATTCGCGATGGCAAGCTTGATCTCTACCAGTGCGTGGTGCCGacc > 2:1067562/1‑100 (MQ=255) ccGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCAGacc > 2:1704013/1‑100 (MQ=255) | GCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACC > NC_000913/1034651‑1034849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |