| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,101,510 | (A)8→7 | 100% | pseudogene (235/349 nt) | wbbL ← | pseudogene, lipopolysaccharide biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,101,503 | 0 | A | . | 72.9% | 236.8 / 158.5 | 129 | pseudogene (242/349 nt) | wbbL | pseudogene, lipopolysaccharide biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base A (14/21); new base . (44/50); total (58/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
GAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACA > NC_000913/2101404‑2101598 | gAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGa > 2:1429573/1‑100 (MQ=255) aaaaaCTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaa > 2:277749/1‑100 (MQ=255) aaacCTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaa < 1:2266085/100‑1 (MQ=255) aaaaCTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaa > 1:4066707/1‑100 (MQ=255) aaaCTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaa < 1:1674082/100‑1 (MQ=255) aaCTGATGAAATTCGATCAAAGTTGCGATTTGATTAAATACGTTTTCTGGCTAAATATCTTAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaa < 1:1476175/99‑1 (MQ=255) aCTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaa < 1:3947319/100‑1 (MQ=255) cTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaa < 1:2721257/100‑1 (MQ=255) cTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaa < 2:1658079/100‑1 (MQ=255) atgaAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaactt > 1:3779938/1‑97 (MQ=255) atgaAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACt > 1:3227680/1‑100 (MQ=255) tgaAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaacttc > 2:127658/1‑96 (MQ=255) tgaAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaacttc < 1:2631954/100‑5 (MQ=255) tgaAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGaaaaaaacttc > 1:2106916/1‑96 (MQ=255) ttCGATCAAAGTTGCTATTTGATAAGAGACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGAtt < 2:1833008/99‑1 (MQ=255) ttCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGAtt < 1:3982445/100‑1 (MQ=255) gATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AACAAAACTTCGATTGTCa > 2:2438152/1‑100 (MQ=255) gATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCa > 1:2534581/1‑100 (MQ=255) aTCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCat < 1:1737710/100‑1 (MQ=255) aTCAAAGTTGCGATGTGATAAAATACGTTTTCTGGCTAAATATATAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCat < 2:3621454/100‑1 (MQ=255) cAAAGTTGCAATTTGACAAAATACGTGTGCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCatga < 2:2468132/100‑1 (MQ=255) aaGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCatgatg < 2:3566188/100‑1 (MQ=255) aGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCAtgatga < 2:4015111/100‑1 (MQ=255) gTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAg < 2:3061239/100‑1 (MQ=255) gTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAg < 1:664637/100‑1 (MQ=255) tGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCa < 1:1266031/100‑1 (MQ=255) gCGATTTGATAAAATACGTTTTCTGGCTAAATATTTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATTATGAGCa < 2:2190631/100‑1 (MQ=255) cGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCAt > 1:606254/1‑100 (MQ=255) cGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATa > 1:3724559/1‑100 (MQ=255) tttGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAAt < 1:2644178/100‑1 (MQ=255) tGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTa > 1:486028/1‑100 (MQ=255) tGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTa < 1:2118812/100‑1 (MQ=255) tGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTa > 1:637966/1‑100 (MQ=255) gATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTAt > 1:2717983/1‑100 (MQ=255) aTAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTTTCATGATGAGCATAATGTATc > 2:3488539/1‑100 (MQ=255) aTAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATc > 1:446892/1‑100 (MQ=255) tAAAATACGTTTTCTGTCTAAATATCTAAAAGCACTTTTTAAGTGACATCTGCAGGCTTTTG‑ACAAAAACTTCGATTGTCATGCTGAGCATAATGTATCg < 2:2428505/100‑1 (MQ=255) tAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATc > 1:325532/1‑100 (MQ=255) agaacaCGTTTTCTAGCTAAATATCTAATAGTACTTTTTAAGTGCCATCTGGAGGCTTTTG‑AAAAAATCTTCGATGGTCATGATGAGCATAATGTATCGc < 2:2239881/95‑1 (MQ=255) aaaaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATc > 2:841621/1‑99 (MQ=255) aaaaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGc < 2:857711/100‑1 (MQ=255) aaaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGc < 2:2719470/100‑1 (MQ=255) aaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCAt > 1:3530401/1‑100 (MQ=255) aaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCAt > 2:3307688/1‑100 (MQ=255) aaTACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCCTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCAt > 2:1107187/1‑100 (MQ=255) tACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGa < 2:3778819/100‑1 (MQ=255) cGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGaaa > 2:1969109/1‑100 (MQ=255) cGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGaaa < 1:934804/100‑1 (MQ=255) gTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGaaaa > 1:813481/1‑100 (MQ=255) ttttCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAg > 1:1028485/1‑100 (MQ=255) ttttCTGAGTAAATATTTAAGAGTACTTTTTAAATGCCATCTGAAGGCTTTTG‑AATTTATCTTCATTTTTCATCATGAGCCTAGCTTATCGCATGaaa < 2:2571555/98‑1 (MQ=255) ttCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCg < 1:979023/100‑1 (MQ=255) cTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCggg < 1:3481714/100‑1 (MQ=255) tGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAACCTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGa < 2:3374064/100‑1 (MQ=255) tGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGa < 2:205518/100‑1 (MQ=255) ggCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGaa > 2:531888/1‑100 (MQ=255) gCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAAc > 2:1156129/1‑100 (MQ=255) gCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAAc > 1:3579865/1‑100 (MQ=255) gCTAAATATCTAAAAGTACTTTTGAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCggg < 2:3408015/97‑1 (MQ=255) cTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAAc < 1:1429756/100‑1 (MQ=255) cTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACa < 1:1969119/100‑1 (MQ=255) cTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACa < 1:2836911/100‑1 (MQ=255) tAAATATCTAAGAGTACTTTTTAAGTGCCAGCGTAAGGGTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAAc < 2:3532373/98‑1 (MQ=255) tatCTAAAAGTATTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATg < 2:3190713/100‑1 (MQ=255) tatCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAAt < 1:527273/100‑1 (MQ=255) atCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGa > 2:1419868/1‑100 (MQ=255) atCTAAAAGTACTTTTTAAGTGCCATCTGAAGGATAATAAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATg < 2:2471030/100‑1 (MQ=255) cTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGaa > 1:2212571/1‑100 (MQ=255) tAAAAGTACTTTTTTAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGt < 2:2843190/100‑1 (MQ=255) tAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGt > 2:2904290/1‑100 (MQ=255) tAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGt > 1:909668/1‑100 (MQ=255) tAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGt > 2:1084370/1‑100 (MQ=255) aaaaGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTc < 1:1091824/100‑1 (MQ=255) aaGTACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTg < 1:797120/100‑1 (MQ=255) aaGTACTTTTTAAGTGCCATCTGAAGGCCTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTg < 1:1107192/100‑1 (MQ=255) gTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGa > 1:1564961/1‑100 (MQ=255) tACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGac < 1:2909355/100‑1 (MQ=255) tACTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGaca < 2:446889/100‑1 (MQ=255) cTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcc > 1:2515268/1‑100 (MQ=255) cTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcc > 2:3639508/1‑100 (MQ=255) cTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcc > 1:1906389/1‑100 (MQ=255) cTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcc > 1:562806/1‑100 (MQ=255) cTTTTTAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcc > 1:3129720/1‑100 (MQ=255) ttttAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAcca > 2:3324199/1‑100 (MQ=255) ttttAAGTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAccag > 1:2075905/1‑100 (MQ=255) ttttAAGTGCCATCGGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGaca < 2:3251113/96‑1 (MQ=255) aGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACAccagccag > 2:3217227/1‑100 (MQ=255) gTGCCATCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGc < 2:3007791/100‑1 (MQ=255) gctaTCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCCTAATGTATCGCATGAAAAGCGGAAACATAATGAAGTCTGACACCAGCCAGGCTa > 2:495446/4‑100 (MQ=255) cATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTaa > 1:1286766/1‑100 (MQ=255) tCTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGcc < 1:3612145/100‑1 (MQ=255) tCTGAAGACTATAAAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTa < 2:3733827/97‑1 (MQ=255) cTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGcc < 1:3995106/100‑1 (MQ=255) cTGAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCt > 2:2153431/1‑100 (MQ=255) gAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCa < 1:4037876/100‑1 (MQ=255) gAAGGCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCa < 2:4066676/100‑1 (MQ=255) ggCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGc > 2:402511/1‑100 (MQ=255) ggCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGc > 1:3849696/1‑100 (MQ=255) ggCTTTTG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGc > 2:1258052/1‑100 (MQ=255) ttttG‑AAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGcaca > 2:3994830/1‑100 (MQ=255) | GAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACA > NC_000913/2101404‑2101598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |