| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,563,518:1 | (A)5→6 | 100% | intergenic (+401/‑74) | yffP → / → yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,563,513 | 1 | . | A | 95.6% | 460.1 / 12.5 | 137 | intergenic (+396/‑79) | yffP/yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (4/2); new base A (60/71); total (64/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑AAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATC > NC_000913/2563414‑2563606 | gTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aa > 1:505741/1‑100 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aaa > 1:3562276/1‑100 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aa > 2:3805127/1‑99 (MQ=255) tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aaaaaatg < 2:1301792/100‑4 (MQ=255) tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aaaaaatg < 2:2951522/100‑4 (MQ=255) ttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aaaaaatga < 1:1667874/100‑5 (MQ=255) ttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑aaaaaatga < 2:3659401/100‑5 (MQ=255) gtgATGCAGATCGCTTTTTCCCTTAAGGCATGTTAGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑G‑aaaaaatgaa > 2:4148883/1‑94 (MQ=255) gATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAGGATGGGAG‑G‑TAAAAAATG‑AAACg > 1:1442280/1‑100 (MQ=255) aTGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCACTCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAA‑G‑TAAAAAATG‑AAACgg < 1:2704332/100‑1 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGt > 2:2848710/1‑100 (MQ=255) aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTggg > 2:1519683/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGa > 1:2388873/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGa < 2:592250/100‑1 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCACCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTg > 2:2228233/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAATAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTg > 1:1647367/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTg > 1:2647826/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTg > 1:3716214/1‑100 (MQ=255) tCCCTTCAAGCATTCTTGTTTAAGTCAGTCAAAGAAAGGCAATTCTCAACAACAAAATAAAGATGAGAA‑G‑TAAAAAAGG‑AAACTGTGGGAAGTGGCttt < 2:1099864/99‑1 (MQ=255) cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTAc < 1:2283137/100‑1 (MQ=255) ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACt < 2:3070227/100‑1 (MQ=255) ccTTCAGACATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACt < 1:1677116/100‑1 (MQ=255) cTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTg > 1:1028556/1‑100 (MQ=255) ttCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTgg < 2:9515/100‑1 (MQ=255) tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGt < 1:634127/100‑1 (MQ=255) ggcattttttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑GAA‑AAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGa > 2:802427/6‑100 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGAt > 1:478782/1‑100 (MQ=255) gCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATg < 1:633634/100‑1 (MQ=255) cATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATgg < 2:1780109/100‑1 (MQ=255) aTTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGt < 2:301939/100‑1 (MQ=255) tttttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTa > 1:3471238/1‑100 (MQ=255) tGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGt > 2:500821/1‑100 (MQ=255) tttAATTCAATTAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACTGTGGGAAGTGGCTTTACTGGTGATGGTAATGttn < 2:1762753/100‑2 (MQ=255) tttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg < 1:2345014/100‑1 (MQ=255) tttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg < 1:472228/100‑1 (MQ=255) ttATTTCGATCAACGGAAGGCAGTTCTCAAAAACAAAATAAAGATGGGAGAG‑A‑AAAAATG‑AAACTGAGGGGAGTGAGTTTAAGGGAGATGGAAATggt > 2:3815457/1‑96 (MQ=255) ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 1:4001554/100‑1 (MQ=255) cttccgatctcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 1:2615949/91‑1 (MQ=255) tAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt < 1:3028329/100‑1 (MQ=255) aaTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt > 2:2721990/1‑100 (MQ=255) aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑GAA‑AAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt > 2:1443597/1‑99 (MQ=255) aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt > 1:3658891/1‑100 (MQ=255) aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt > 2:3412146/1‑100 (MQ=255) aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGAAGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt > 2:3393697/1‑100 (MQ=255) ttCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg < 1:4099108/100‑1 (MQ=255) ttCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg > 1:2905777/1‑100 (MQ=255) tcaatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 1:1990661/100‑1 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 1:310056/1‑100 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:3318578/100‑1 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:2772811/100‑1 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 1:2054760/100‑1 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 2:1719144/1‑100 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:1197454/100‑1 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 1:4060974/1‑100 (MQ=255) tcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATC‑AAACGGTGGGAAGTGGCTTTAGTGGTGATGGTAATGTTGGTTTGCTGt > 2:522713/1‑99 (MQ=255) caaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAt > 2:2754975/1‑100 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAACTACAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt < 2:760718/100‑1 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt < 2:2024052/100‑1 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTAATGGTGATGGTAATGTTGGTTTGCTGTAtt > 1:972738/1‑100 (MQ=255) cGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGa > 2:1942084/1‑100 (MQ=255) aaaGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAc < 1:1674243/100‑1 (MQ=255) aaaGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAc > 1:2628796/1‑100 (MQ=255) aGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtg < 1:3287984/100‑1 (MQ=255) ggCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgt < 2:2322397/100‑1 (MQ=255) gCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg > 1:1017925/1‑100 (MQ=255) gCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg > 1:219260/1‑100 (MQ=255) gCAGTGCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg < 1:1591065/100‑1 (MQ=255) aGTTCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg < 2:260250/98‑1 (MQ=255) ttCCCAACAACAAGATAAAGATGGGAG‑G‑T‑AAAAAAGTAAACGGTGGGAAGTGGCTTTACTGGTGATGGGAATGTTGGTTTGCTGTATTGAACTGTGAagg < 2:3474031/100‑1 (MQ=255) ttCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagg < 1:2918101/100‑1 (MQ=255) ttCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagg < 1:515498/100‑1 (MQ=255) tCCCAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagga > 2:2355807/1‑100 (MQ=255) cccAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag > 1:2133424/1‑100 (MQ=255) cccAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag < 2:3117438/100‑1 (MQ=255) ccAACAACAAAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggagg < 2:2135176/100‑1 (MQ=255) caacaacaaAATAAAGATGTGAG‑G‑TAAAAAATG‑AAACTGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGaa < 2:4048239/94‑1 (MQ=255) caacaacaaAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAggagga > 1:3413770/1‑100 (MQ=255) caacaaAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGc > 1:1630219/1‑100 (MQ=255) acaaAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa < 1:1443606/100‑1 (MQ=255) naaaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCAt > 2:2348725/2‑100 (MQ=255) caaAATAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCAt < 1:2444875/100‑1 (MQ=255) aaaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATg > 2:3275075/1‑100 (MQ=255) aaaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATg < 1:2966091/100‑1 (MQ=255) aaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGa > 2:3397273/1‑100 (MQ=255) aaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGa > 2:2467385/1‑100 (MQ=255) aaaTAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGACTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGa > 2:1681581/1‑100 (MQ=255) tAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc > 2:502392/1‑100 (MQ=255) tAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc < 1:4080215/100‑1 (MQ=255) tAAAGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc < 1:3350663/100‑1 (MQ=255) tAAAGATGGAAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACACCATGAAAc < 2:2287343/100‑1 (MQ=255) aaaGATGTGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACt < 2:2585351/100‑1 (MQ=255) aaaGATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACt < 2:3693477/100‑1 (MQ=255) gATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtttt > 2:3183970/1‑100 (MQ=255) gATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtttt < 1:3766905/100‑1 (MQ=255) gATGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACGGTGAAGGAGGACGCCATGAAACtttt > 2:877255/1‑100 (MQ=255) aTGGGAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGACGGTAAAGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTa > 2:925086/1‑100 (MQ=255) gggAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAAt < 2:2788690/100‑1 (MQ=255) gggAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAAt < 2:861118/100‑1 (MQ=255) ggAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATc > 2:236735/1‑100 (MQ=255) ggAG‑G‑TAAAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATc < 1:2985972/100‑1 (MQ=255) | AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAG‑G‑T‑AAAAATG‑AAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATC > NC_000913/2563414‑2563606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |