| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,665,195:1 | (T)7→8 | 100% | intergenic (+75/‑120) | dmsD → / → clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,665,188 | 1 | . | T | 96.5% | 282.4 / 2.8 | 86 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base T (45/38); total (48/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TTCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATG > NC_000913/1665089‑1665281 | ttCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACg > 2:1640294/1‑100 (MQ=255) ccTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATAGTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑t < 2:2981599/100‑1 (MQ=255) tGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑ttt > 1:1436848/1‑100 (MQ=255) gTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt > 1:647786/1‑100 (MQ=255) tCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑t < 1:1818905/100‑1 (MQ=255) cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tt < 1:3780900/100‑1 (MQ=255) cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tt < 2:2197828/100‑1 (MQ=255) gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttt < 2:3163881/100‑2 (MQ=255) gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttt < 1:2156622/100‑2 (MQ=255) cgGTTAAACCTCTGTTTCGATAGTATCTCCTTAATATTGCTGGATGGTGACTATTTCGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑t < 2:2847550/97‑1 (MQ=255) cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCACTCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttta < 2:2232766/100‑3 (MQ=255) cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttta > 1:4072289/1‑98 (MQ=255) cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttt < 2:111324/99‑2 (MQ=255) ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tttat > 1:2418946/1‑97 (MQ=255) ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tttat > 2:631598/1‑97 (MQ=255) gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tttatc < 1:908597/100‑5 (MQ=255) ttAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑tttatct < 1:3296467/100‑6 (MQ=255) tgaaCCGCGGTTGCGATAGGATCACCGTAATATTGCAGGATGGTGGCGATTACGCGCAATCCGACAATAATAGGTTACAGTGTCACG‑‑t‑tttt‑ttta < 2:2416198/94‑3 (MQ=255) aaaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATctct > 1:2192332/1‑100 (MQ=255) aaaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATctct > 1:576153/1‑100 (MQ=255) aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCtt > 1:843338/1‑100 (MQ=255) aCCGCTGTTTCGATAGGATCACCGTAATATTGACGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTa > 2:3979293/1‑100 (MQ=255) cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTAGGCGCATTCCGGAAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTaaa < 2:1137422/100‑1 (MQ=255) cTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAgc < 1:3389051/100‑1 (MQ=255) tGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGAGTCACG‑‑TATTTT‑TTATCTCTTAAAgta > 2:2405381/1‑98 (MQ=255) ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAgcacgc > 2:3216258/1‑100 (MQ=255) tCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTTTCTCTTAAAgc > 2:3372023/1‑95 (MQ=255) cGATAGGATCACCGTAATTTTGCCGGATGTTGACGATTACTCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAgcacgcac < 1:3597128/100‑1 (MQ=255) cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAgcacgcac < 2:1976929/100‑1 (MQ=255) cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTT‑TTATCTCTTAAAGCACGCACt > 2:3800176/1‑100 (MQ=255) gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAgcacgcac < 2:3476900/99‑1 (MQ=255) gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACt > 1:421438/1‑100 (MQ=255) ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCtt > 2:1731558/1‑100 (MQ=255) ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCtt > 2:2693030/1‑100 (MQ=255) ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCtt > 1:4129188/1‑100 (MQ=255) aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCtttt < 2:3784114/100‑1 (MQ=255) tCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTg < 1:2912863/100‑1 (MQ=255) cACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCtgtggc < 2:3287143/100‑6 (MQ=255) aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg > 2:2815507/1‑100 (MQ=255) ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCgg < 1:2302489/100‑1 (MQ=255) ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCgg > 1:2474607/1‑100 (MQ=255) ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:388009/99‑1 (MQ=255) cGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTT‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCgg < 1:3492732/100‑1 (MQ=255) gTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCt > 1:377278/1‑100 (MQ=255) gTAATATTGCCGGAGGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGc < 2:4041797/99‑1 (MQ=255) gTAAGATTGCCGGATGGTGACGATTACGTGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGc < 2:3697821/99‑1 (MQ=255) tAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTg < 1:3982713/100‑1 (MQ=255) tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 1:984488/100‑1 (MQ=255) atTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCct > 1:3543182/1‑100 (MQ=255) atTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCct > 1:979731/1‑100 (MQ=255) ttGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctc < 1:1283124/100‑1 (MQ=255) tGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctct > 1:2697948/1‑100 (MQ=255) gCCGGATGGTGACGATTATGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt > 1:2274065/1‑100 (MQ=255) gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATTTTTTAAAGTACACACTGCTTTTGCGGCTg > 2:1340214/1‑93 (MQ=255) gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt > 1:1399954/1‑100 (MQ=255) gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTTGTTATCTCTTAAAGCAAGCACTGCTTTTGCGGATGGCCTCtt > 1:102028/1‑100 (MQ=255) cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtttt > 2:3585667/1‑100 (MQ=255) cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtttt > 1:3319313/1‑100 (MQ=255) ggATGGTGACGATTATGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 1:4110684/100‑1 (MQ=255) gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc > 2:4167818/1‑100 (MQ=255) gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 2:2091885/100‑1 (MQ=255) aTGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGcc < 1:3352200/100‑1 (MQ=255) gTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCa > 1:646229/1‑100 (MQ=255) tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTTTTTTTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 2:1623775/1‑100 (MQ=255) aCGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaaa < 1:3449054/100‑1 (MQ=255) cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 1:928523/1‑100 (MQ=255) cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt < 1:2613952/100‑1 (MQ=255) cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 1:1306382/1‑100 (MQ=255) gATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt < 2:2958680/99‑1 (MQ=255) aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATTTCTTAATTCACGCACTGCTTTTGCGGCTGGCCCCTTTTGCCGCAACATCGTc > 1:623479/1‑99 (MQ=255) cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc < 2:866492/100‑1 (MQ=255) gcgcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGcc > 2:374407/1‑100 (MQ=255) cgcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCcccc > 2:3346254/1‑100 (MQ=255) gcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCg < 2:3467885/100‑1 (MQ=255) cAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGCCTGGCTTCTTTTGCCGCAAACTAGTCGccc > 2:4039305/1‑98 (MQ=255) tCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt > 1:3585095/1‑100 (MQ=255) ccGGCAATAATAGGTTACAGTGTCACGTTT‑TTTT‑TTTTTTTTTAAAGCACGCACTGCTTTTGCGGCTTTCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt > 2:2630655/1‑100 (MQ=255) ggCAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa < 2:844097/100‑1 (MQ=255) cAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt < 2:699683/100‑1 (MQ=255) cAATAATAGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt > 1:2713628/1‑100 (MQ=255) ataataGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc < 2:2896487/100‑1 (MQ=255) taataGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 1:548183/100‑1 (MQ=255) aataGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc < 1:3150305/100‑1 (MQ=255) ataGGTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 2:2754179/98‑1 (MQ=255) ggTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCCTTGCCCAttt > 2:2306923/1‑100 (MQ=255) ggTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAttt > 2:4137417/1‑100 (MQ=255) gTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 1:3129367/100‑1 (MQ=255) gTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 1:3633257/1‑100 (MQ=255) gTTACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 1:601611/1‑100 (MQ=255) tACAGTGTCACGT‑T‑TTTT‑TTTTTTTTTTAAGCACGCACTGCTTTTACGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg > 2:1853264/1‑100 (MQ=255) tACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg > 2:1992338/1‑100 (MQ=255) tACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 1:1731568/100‑1 (MQ=255) tACAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 1:218660/100‑1 (MQ=255) aCAGTGTCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc < 1:2451544/100‑1 (MQ=255) gtgtCGCGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTc < 1:1823928/99‑1 (MQ=255) gtgtCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCt < 1:3446905/98‑1 (MQ=255) gtgtCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa > 1:2388273/1‑100 (MQ=255) gtCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:925374/100‑1 (MQ=255) tCACGT‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:1620435/99‑1 (MQ=255) tCACGT‑T‑TTTT‑TTATCTCTTAAAGCACCCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCCAACTAGTCGCCCGTCTTTCCTTGCCCCTTTCtccccctg > 2:3650322/1‑92 (MQ=255) | TTCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATG > NC_000913/1665089‑1665281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |