| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4103470 = | NA (NA) | 10 (0.070) | 8/164 | NT | NA | coding (649/675 nt) | yiiM | 6‑N‑hydroxylaminopurine resistance protein |
| ? | NC_000913 | 4103494 = | NA (NA) | coding (673/675 nt) | yiiM | 6‑N‑hydroxylaminopurine resistance protein | |||||
CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4103575‑4103470‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑aaaaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCA > NC_000913/4103494‑4103591 CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCG > 1:1293755/1‑100CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCG < 1:1506803/100‑1CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCG > 2:1105809/1‑100CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCG < 1:2274523/100‑1 TTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG > 2:1751948/1‑100 TACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AA > 1:2616265/1‑100 ACGCCGCGTCCGGCATTTGAGAAGGCTGCCTGATGCGGCGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG < 2:739518/97‑1 CGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA > 1:4009304/1‑100 CGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA < 1:3239253/100‑1 CGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA > 1:1598749/1‑100 CGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA > 1:1517994/1‑100 GGGGGTTATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGG > 1:649117/1‑100 GGGGTTATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGA > 1:447432/1‑100 GGTTATTTTCCCCACAACCGGCGGGAAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGAT > 2:704930/1‑100 GGTTATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATG > 2:1282985/1‑100 GGTTATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGAAGCTATAAGCGTCGCATCAGGCATGCTGCACAACTGCaaga > 2:3589687/1‑94 GTTATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGC > 1:1442582/1‑100 ATTTTCCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGC > 1:2273498/1‑100 TCCCCACAACCGGCGGGAAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTA > 2:2171897/1‑100 CCCCACAACCGGCGGG‑AAAATAACCCCCGGAGTGCAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAA > 2:761708/1‑100 CAACCGGCGGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAAGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCT > 2:2350013/1‑100 GGG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGC > 1:1236069/1‑100 GG‑AAGATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCC < 1:3941108/100‑1 GG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCC < 2:1013531/100‑1 GG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCC < 1:1543834/100‑1 GG‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCC < 1:3326567/100‑1 GG‑AAAATAA‑CCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCT > 1:586353/1‑100 G‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCT > 1:3720564/1‑100 G‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCT < 1:3666982/100‑1 G‑AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCT > 1:296360/1‑100 AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCGAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTG < 2:3512460/100‑1 AAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTG < 2:242128/100‑1 AATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAATCGCCTTATCCTGCCTGCA < 1:3843720/100‑1 AATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCA < 2:3397695/100‑1 CGTTTACGCCGCATCCGGCATTTGAGCAGGATGCCTGATGCGACGCTGATAGCGTCTTATCAGGCCTACACTCCGGGGGTTATTTTCCCCACAACCGGCGGG‑AAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4103575‑4103470‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑aaaaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCA > NC_000913/4103494‑4103591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |