| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3941549 = | 58 (0.390) | 15 (0.110) | 3/168 | NT | 21.5% | intergenic (‑222/‑259) | yieP/rrsC | putative transcriptional regulator/16S ribosomal RNA of rrnC operon |
| ? | NC_000913 | 4035245 = | NA (NA) | intergenic (+92/‑286) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
Only 100 of 113 total aligned reads displayed.
CGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAA > NC_000913/3941450‑3941648 | cgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtg < 1:4004261‑M1/1‑1 (MQ=255)cgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtg > 1:2725966‑M1/100‑100 (MQ=255)cgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtg > 1:1484197‑M1/100‑100 (MQ=255)cgccttcccgctacagagtcaagcatttatttttgctttctcggccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtg > 1:1723526‑M1/100‑100 (MQ=255)cgcctgcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtg > 1:1824402‑M1/100‑100 (MQ=255) gccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgagccggcggcgtgtttgccgttgttccgtgt < 2:2507962‑M1/2‑1 (MQ=255) gccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtgt > 1:1323816‑M1/99‑100 (MQ=255) gccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtgt > 2:1019507‑M1/99‑100 (MQ=255) ccttctcgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc > 2:1878329‑M1/98‑100 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc > 2:2248221‑M1/98‑100 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc > 2:1177598‑M1/98‑100 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 2:2070511‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 1:2748038‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 1:2757578‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 2:312450‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 1:1314929‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 1:2570236‑M1/3‑1 (MQ=255) ccttcccgctacagagtcaagcatttatttttgctttctctgccggagttcccaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc < 1:3669520‑M1/3‑1 (MQ=255) cttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCa > 1:1660692‑M1/97‑100 (MQ=255) cttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCa < 1:4173697‑M1/4‑1 (MQ=255) cttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCa < 2:3308614‑M1/4‑1 (MQ=255) ttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagatccccgctgacccggcggcgtgtttgccgttgttccgtGTCAg > 2:1645683‑M1/96‑100 (MQ=255) ttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagagccccggtgacccggcggcgtgtttgccgttgtgccgtGTCAg > 2:2206276‑M1/96‑100 (MQ=255) ttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTc > 2:2088572‑M1/96‑98 (MQ=255) ttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCAg < 1:2580228‑M1/5‑1 (MQ=255) ttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCAg > 1:1471221‑M1/96‑100 (MQ=255) tcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgtgtttgccgttgttccgtGTCAg < 2:881642‑M1/5‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgtGTCAGTGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGc < 1:990746‑M1/63‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGc < 1:601499‑M1/63‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGc < 1:3850334‑M1/63‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGc < 1:2698152‑M1/63‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGc < 1:2167503‑M1/63‑1 (MQ=255) ccccgctgacccggcggcgtgtttgccgttgttccgaGTCAGTGGGGTTATCCTGAGAACTCCGGCAGCGGAAGCAAAAATAAATGCgtgacttcgt < 2:4088502‑M1/60‑5 (MQ=255) cccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCg < 1:2526478‑M1/64‑1 (MQ=255) cccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCg < 1:1678975‑M1/64‑1 (MQ=255) cccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCg < 1:202953‑M1/64‑1 (MQ=255) cccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCg < 1:1290502‑M1/64‑1 (MQ=255) ccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCACAAATAAATGCTTGACTCTGTAGCgg < 1:3880875‑M1/65‑1 (MQ=255) ccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCgg < 1:1338711‑M1/65‑1 (MQ=255) ccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCgg < 1:3732191‑M1/65‑1 (MQ=255) ccgctgacccggcggcgtgtttgccgttgttccgtGTCAGCGGGGTTCTCCTGAGAAATCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCgg < 2:2928376‑M1/65‑1 (MQ=255) tGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGTGGGaaa < 1:2171897/100‑1 (MQ=11) tGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGaaa > 1:1570377/1‑100 (MQ=11) gACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAg < 1:2379699/100‑1 (MQ=31) gACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAg < 1:3312881/100‑1 (MQ=31) cacGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCg > 2:1131054/1‑100 (MQ=32) cacGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCg > 1:2381185/1‑100 (MQ=32) cacGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCg > 1:3258358/1‑100 (MQ=33) acGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGt < 1:3934116/100‑1 (MQ=32) cGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGta > 1:3067/1‑100 (MQ=32) cGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGta > 1:323570/1‑100 (MQ=33) ggAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGTGtat > 2:2626371/1‑100 (MQ=17) gAACAACGGCAAACAGGCCGCCGGGTCAGGGTTGTTCGCCTGAGAACTCAGGCAGAGAAAGCAAAAATAAATGCTTGAGGCTGTAGCGGGAAAGCGtatt < 2:389521/100‑1 (MQ=11) gAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtatt < 1:155124/100‑1 (MQ=33) aacaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAGAATAAATGCTTGACTCTGTAGCGGGAAAGCGtatta > 1:2924108/1‑100 (MQ=18) aacaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtatta < 1:3318030/100‑1 (MQ=33) aacaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtatta < 2:2759063/100‑1 (MQ=33) aacaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtatta < 2:2680083/100‑1 (MQ=32) acaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTGCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtattat < 2:3946231/100‑1 (MQ=17) acaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtattat > 1:2522748/1‑100 (MQ=33) acaacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGtattat < 1:1898854/100‑1 (MQ=33) caacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATg > 1:3316080/1‑100 (MQ=33) aacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGc < 2:513671/100‑1 (MQ=32) aacGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGc < 1:2858013/100‑1 (MQ=33) acGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGca > 1:507639/1‑100 (MQ=32) acGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGca < 1:4011855/100‑1 (MQ=33) acGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGca > 2:4160361/1‑100 (MQ=33) acGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGca < 1:3810689/100‑1 (MQ=33) acGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGca < 1:2883054/100‑1 (MQ=33) acGGCAAACACGCCGCCGGGTCAGCGAAGTTCTCCTGAGAACTGCGGCAGAGAAAGCAAAAATAAATGATTGACTCTGTAGCGGGAAAGCGTATTATGc < 2:157875/99‑1 (MQ=11) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATATATGCTTGACTCTGTAGCGGGAAAGCGTATTATGc < 2:3471563/98‑1 (MQ=17) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac > 1:1410605/1‑100 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac < 2:2527100/100‑1 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac < 2:1619587/100‑1 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac > 2:3915019/1‑100 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac > 1:803194/1‑100 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac < 1:4160395/100‑1 (MQ=33) cGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcac > 1:3361955/1‑100 (MQ=33) ggCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcaca > 2:2124831/1‑100 (MQ=33) ggCAAACACGCCGCCGGGTCAGAGGGGTTCTCCTGAGAACTTCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGcaca > 1:3924145/1‑100 (MQ=255) cAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACAcc < 1:1047139/100‑1 (MQ=33) cAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACAcc > 1:3802780/1‑100 (MQ=33) aaaCACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACAcc > 2:2320652/1‑99 (MQ=32) aaCACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACAcccc > 2:1093812/1‑100 (MQ=32) cgccgcCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCgcgc > 1:1064899/1‑100 (MQ=32) cgccgcCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCgcgc > 1:1860059/1‑100 (MQ=32) cgccgcCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCgcgc < 1:3545805/100‑1 (MQ=33) gccgccGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGcgcc > 1:2091490/1‑100 (MQ=33) ccgccgGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGcgccg < 2:1477274/100‑1 (MQ=32) ccgccgGGTCAGCGGAGATCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTACCGGTAAACCGCATTATGCACACCCCGcgcc > 2:3479753/1‑99 (MQ=11) cgccgGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGcgccgc < 1:2957070/100‑1 (MQ=32) cgccgGGTCAGCGGGGTTCTCCTGAGAACGCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCACGcgccgc < 2:1036438/100‑1 (MQ=12) gccgGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCt > 2:1751874/1‑100 (MQ=33) ccgGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTg < 1:542846/100‑1 (MQ=33) gggTCAGCGGGGTTCTCCTGAGACCTCCGGCAGAGAAATCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTgag < 2:1494333/100‑1 (MQ=16) gggTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTgag < 2:1236834/100‑1 (MQ=33) gggTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTgag < 1:2111673/100‑1 (MQ=33) gggTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTgag < 1:458160/100‑1 (MQ=33) ggTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTgaga < 1:204570/100‑1 (MQ=33) GTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGaa < 1:2314668‑M1/100‑1 (MQ=255) | CGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAA > NC_000913/3941450‑3941648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |