| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4508581 = | 4 (0.030) | 20 (0.140) | 11/166 | NT | 78.9% | noncoding (99/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 4508599 = | 7 (0.050) | noncoding (81/1221 nt) | IS30 | repeat region | |||||
CGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAG > NC_000913/4508482‑4508680 | tatattaaaaaaagcaactgtagattccattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc < 1:3170619‑M1/1‑1 (MQ=255)tatattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc > 2:2295808‑M1/100‑100 (MQ=255)tatattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc > 1:3313250‑M1/100‑100 (MQ=255)tatattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc < 1:168407‑M1/1‑1 (MQ=255)tatattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc < 1:1495791‑M1/1‑1 (MQ=255) tattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcag < 1:4151535‑M1/3‑1 (MQ=255) tattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcag < 1:1755485‑M1/3‑1 (MQ=255) tattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcag < 2:4111504‑M1/3‑1 (MQ=255) tattaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcag < 1:1570698‑M1/3‑1 (MQ=255) attaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCaga < 1:1664903‑M1/4‑1 (MQ=255) attaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCaga < 2:591998‑M1/4‑1 (MQ=255) attaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCaga < 1:1252608‑M1/4‑1 (MQ=255) ttaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgactgagacgaacatttacagc < 2:4002152‑M1/1‑1 (MQ=255) ttaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCagag > 1:3863685‑M1/96‑100 (MQ=255) ctaaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCagag > 1:948061‑M1/96‑100 (MQ=255) taaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagactaacatttacagCAGAgg > 2:355352‑M1/95‑100 (MQ=255) taaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAgg < 2:3781578‑M1/6‑1 (MQ=255) taaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAgg < 1:104389‑M1/6‑1 (MQ=255) taaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAgg < 2:864895‑M1/6‑1 (MQ=255) aaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagagag < 2:948057‑M1/7‑3 (MQ=255) aaaaaaagcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAgg < 1:1435221‑M1/6‑1 (MQ=255) aggctactgtagattcaattggtcaacgcaacagtgatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCttttt > 2:834667‑M1/89‑100 (MQ=255) gcaactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTcc > 1:2842114‑M1/87‑100 (MQ=255) caactgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagagatcggaagag < 1:598090‑M1/15‑11 (MQ=255) ctgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctg > 1:498588‑M1/83‑100 (MQ=255) tgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTGTCCTctgc > 2:2300555‑M1/82‑100 (MQ=255) gtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgct > 2:2384196‑M1/81‑100 (MQ=255) tagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 2:1362838‑M1/80‑100 (MQ=255) tagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 2:2264485‑M1/80‑100 (MQ=255) tagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 1:608714‑M1/80‑100 (MQ=255) tagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 1:1496839‑M1/80‑100 (MQ=255) tagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 1:2209594‑M1/80‑100 (MQ=255) tacatttgattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 2:1810868‑M1/80‑100 (MQ=255) agattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTctgctg > 2:465999‑M1/79‑99 (MQ=255) agattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGt > 2:1601193‑M1/79‑100 (MQ=255) agattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGt > 1:1698930‑M1/79‑100 (MQ=255) agattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGt > 2:312819‑M1/79‑100 (MQ=255) tcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGTAAAt > 1:1189697‑M1/75‑100 (MQ=255) attggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGTAAATGtt > 1:1133993‑M1/72‑100 (MQ=255) ttggtcaacgcaacggttatgtgaaaacattggggtgcttaggttttttgaatgagacgaacatttacagCAGAGGCTTTTGCCTCTGCTGTaaa > 2:3927684‑M1/71‑95 (MQ=255) gtgccGGGTTTTGAACCCAGGATATTTGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTTAAAAACAGTGGCTTTTTCCTCTGCTTTAAATGtt > 2:2700461/4‑99 (MQ=1) tcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGTAAATGTTCGtct > 1:2432143‑M1/67‑100 (MQ=255) ggtttctaCCGAGCATATTCGCAATTTCACTGAAGCGTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTCCTGTAAACGt > 2:2198568/8‑91 (MQ=1) acgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagCAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCAt > 1:483822‑M1/64‑100 (MQ=255) cttaaGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGttt < 1:1466343/95‑1 (MQ=1) agccgcttCCGTTCTTCCTTAGTTCAAGAACAGAGGCTTTTTCCGCTGCTGTAAATGTTTGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTcaca < 2:3742866/93‑1 (MQ=1) aaaagCAGAGGCTATTTCCTCTGCTGTAAATGTTCGTCTCATTCAAATAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATc > 2:3594932‑M1/6‑100 (MQ=255) CAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAACCCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACa > 2:1576890‑M1/1‑99 (MQ=255) CAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGCCCAATTGAATCTACAg < 2:1686894‑M1/100‑1 (MQ=255) CAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAg < 2:2465606‑M1/100‑1 (MQ=255) CAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAg > 1:1479233‑M1/1‑100 (MQ=255) CAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAg > 2:1755592‑M1/1‑100 (MQ=255) | CGCCAGTATCCCTTAACATAGTGAAGATCGTTCCGGGTTTTGAACCCAGGATATTCGCTATTTCACTGAAGCCTGTTCCGTTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAG > NC_000913/4508482‑4508680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |