New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)51 (0.360) 18/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 125 total aligned reads displayed.

ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225923‑226097
                                                                           |                                                                                                   
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                             <  1:2980156/100‑1 (MQ=11)
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                             <  1:3895219/100‑1 (MQ=11)
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                             <  2:2002104/100‑1 (MQ=11)
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                             <  2:3272275/100‑1 (MQ=11)
aTAAGTTAATGAGGCGAGCCGGGAGAACTGAACGCTCTAATTTCCCCGGGGAAAAGAAAGCAACCGAGATCCCCCCATTAGCGGCGAGCGAACGGggagg                                                                             <  2:456156/100‑1 (MQ=11)
  aGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag                                                                           <  2:428074/100‑1 (MQ=32)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCGCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGAGAGCGAACGGGgaggag                                                                           >  2:560325/1‑99 (MQ=12)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:13201/1‑100 (MQ=33)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:1492827/1‑100 (MQ=33)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          <  1:522962/100‑1 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         <  1:1620914/100‑1 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         <  2:2883971/100‑1 (MQ=32)
     ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                        <  1:361297/100‑1 (MQ=32)
     ccgatctggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                        <  1:880846/93‑1 (MQ=255)
      tAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCa                                                                       >  1:2243283/1‑100 (MQ=33)
       aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCag                                                                      <  1:453167/100‑1 (MQ=33)
       aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCa                                                                       <  2:625030/99‑1 (MQ=32)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                   >  2:3868192/1‑100 (MQ=33)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                   <  1:135439/100‑1 (MQ=33)
           aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                  >  1:106866/1‑100 (MQ=32)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagatcgg                                                                 >  2:880841/1‑96 (MQ=17)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                 >  1:3049637/1‑100 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                >  1:1918479/1‑100 (MQ=33)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcccg                                                                >  2:3588943/1‑96 (MQ=17)
                aaCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                             <  2:3084527/100‑1 (MQ=33)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGAAGAGGGGAGCGAACGGGGAAGAGACCGGAGCCCGAAt                                                             >  2:2843740/1‑99 (MQ=11)
                  ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCa                                                           >  1:1923538/1‑100 (MQ=32)
                   cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                          <  1:2797294/100‑1 (MQ=33)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                         >  2:1255543/1‑100 (MQ=32)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                          >  2:1627171/1‑99 (MQ=32)
                     ggggAACTGAAACATCTAAGTACCGCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        <  2:1657972/100‑1 (MQ=18)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        >  2:277146/1‑100 (MQ=33)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        <  1:1855491/100‑1 (MQ=32)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGCAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        <  1:1482892/100‑1 (MQ=18)
                       ggAACTGAAACATCTAAGTCCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  1:2553990/100‑1 (MQ=18)
                        gAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgt                                                     >  1:2475348/1‑100 (MQ=33)
                         aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    >  1:2112879/1‑100 (MQ=33)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAGATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:2850412/1‑100 (MQ=18)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:3111001/1‑100 (MQ=32)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    >  2:1609682/1‑98 (MQ=32)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCAAGAGCCTGAATCAgtgtgtgtg                                                  >  1:4156273/1‑100 (MQ=17)
                            tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                 <  2:3551915/100‑1 (MQ=33)
                             tgaacaacTAAGTACCTGGAGGAAAAGAAATCAACTGAAATTCCCGCCGTAGTTGCGAGCAAACGGTAAGGAGCCCAGACGCTGAATCAgtttgggtg                                                  >  2:1802944/3‑98 (MQ=2)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGGTCGGGGAGGAGCCCAGAGCCTGAATGAgggtgaggg                                                  >  2:266504/1‑94 (MQ=11)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCTGAATCAGTGTGTGTGtt                                                >  2:2131260/1‑100 (MQ=17)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                 >  2:2657520/1‑99 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                <  2:2076007/100‑1 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                >  1:3945179/1‑100 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                <  2:566960/100‑1 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                <  1:3868221/100‑1 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGAGGCGAGAGAACGGGGAGGAGCCCAGAGCCTGAATCAgta                                                        >  2:3983593/1‑91 (MQ=9)
                              aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTa                                               >  1:57519/1‑100 (MQ=33)
                                aCATCTAAGTACCCCGAGGAAAAGAAATCAAGCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                              <  2:3431438/99‑1 (MQ=17)
                                 cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                            <  2:4071435/100‑1 (MQ=33)
                                  aTCTCAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGTGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTTGTgg                                           <  2:2521363/100‑1 (MQ=255)
                                  aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTgg                                           <  2:2243269/100‑1 (MQ=33)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                          >  1:2164404/1‑100 (MQ=32)
                                    cTAAGTACCCCGAGGAAAGGAAAGCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGGCCAGAGCTTGAATCAGTGGGTGGGTGAGTGGaa                                         >  2:1649080/1‑100 (MQ=11)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        <  2:3896876/100‑1 (MQ=32)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGCGTGTGTGTTAGTGGAAGCg                                      <  1:3133055/100‑1 (MQ=18)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCg                                      <  1:1650528/100‑1 (MQ=18)
                                        gTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGt                                     >  1:2196636/1‑100 (MQ=33)
                                          aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                   >  1:3389280/1‑100 (MQ=33)
                                          aCCCCGAGGAAAAGAAATCAACCGAGATACCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                   <  2:4107324/100‑1 (MQ=17)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                  <  1:4098045/100‑1 (MQ=33)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                  >  1:231729/1‑100 (MQ=32)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                  <  1:1255549/100‑1 (MQ=33)
                                             ccGAGGACAAGAAATCAACCGAGATTCCCCCAGTCGCGGCGGGCGGACGTGGAGGTGCCCAGAGCCTGAATGAGAGTGTGTGTTAGTGGAAGCCTc                                    >  2:1182740/1‑96 (MQ=11)
                                             ccGAGGAAAAGAAATCAACCGAGATTGCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                >  1:2532182/1‑100 (MQ=18)
                                              cGAGGAAAAGAAATCAACCGAGATTCCGCCAGGAGCGGCGAGCGAACGGGGAGGAGCCCTGAGCCTGAATCAGTGTGTGTGTTATTGGAAGCGTCTgg                                 <  2:2576206/98‑1 (MQ=11)
                                              cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaa                               >  1:1929879/1‑100 (MQ=33)
                                               gAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGAGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaan                              <  2:2581298/100‑2 (MQ=17)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                            <  1:3763151/100‑1 (MQ=33)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:1117711/1‑100 (MQ=32)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:3457126/1‑100 (MQ=33)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:1659790/1‑100 (MQ=33)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                         <  1:4002136/100‑1 (MQ=33)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                       >  2:120319/1‑100 (MQ=33)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                       <  2:1812225/100‑1 (MQ=33)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                       <  1:2405895/100‑1 (MQ=33)
                                                       gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGTcgcgcg                      <  1:2652615/100‑1 (MQ=18)
                                                       gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                      >  2:1831737/1‑100 (MQ=32)
                                                       gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                      <  1:3290180/100‑1 (MQ=33)
                                                         aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCACAGCCTGAGTCAGTGTGTGCGTTAGTGGAAGCGACTGGAAAGGCGCGCGa                     >  2:3960401/1‑99 (MQ=11)
                                                          aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                   <  2:2208842/100‑1 (MQ=33)
                                                            cAACCGATTTTCCCCCAGTAGCGGCTGCTGAACGTGGAGGAGCCCAGAGCCATTATCAGTGTGTTGCATAGTAGAAGCGTCTCGATTGCCGCGCGa                     >  2:1193509/1‑96 (MQ=2)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGGTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                >  2:1783263/1‑100 (MQ=17)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              <  2:3098217/100‑1 (MQ=33)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              >  1:2494744/1‑100 (MQ=33)
                                                                cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt             <  1:781412/100‑1 (MQ=32)
                                                                cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt             <  1:3772092/100‑1 (MQ=33)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg            <  1:2383731/100‑1 (MQ=33)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg            <  1:937744/100‑1 (MQ=33)
                                                                  agaCTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCGGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg            <  1:1626537/99‑1 (MQ=12)
                                                                     ttCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg        <  1:1051990/100‑1 (MQ=32)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc     >  1:922817/1‑100 (MQ=33)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc     >  1:5559/1‑100 (MQ=33)
                                                                         cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc    >  2:1943319/1‑100 (MQ=33)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGGCAGCCCCg   <  2:2620029/100‑1 (MQ=18)
                                                                           cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGt  <  2:3509464/100‑1 (MQ=33)
                                                                           |                                                                                                   
ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225923‑226097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.