| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1011918 = | NA (NA) | 8 (0.060) | 12/162 | NT | NA | intergenic (+47/‑83) | uup/pqiA | replication regulatory ABC‑F family DNA‑binding ATPase/paraquat‑inducible, SoxRS‑regulated inner membrane protein |
| ? | NC_000913 | 1011945 = | NA (NA) | noncoding (27/29 nt) | REP87 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP87 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
Only 100 of 204 total aligned reads displayed.
AGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAACATCATCA > NC_000913/1011819‑1012017 | gcgagcacaggatgtgcttcgtggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcat < 2:2954721‑M1/1‑1 (MQ=255)gcgagcacaggatatgcttcgcggcatgatgatgttcggacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcat < 2:2578639‑M1/1‑1 (MQ=255)aGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAAtt > 1:965423/1‑100 (MQ=255) gCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTg > 2:741833/1‑100 (MQ=255) gCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTg < 2:1742100/100‑1 (MQ=255) cgagcacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTg > 2:4091025‑M1/99‑100 (MQ=255) agcacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGcc < 1:3140363‑M1/4‑1 (MQ=255) agcacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGcc > 1:1620298‑M1/97‑100 (MQ=255) aaGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGcc > 1:1184570/1‑100 (MQ=255) gcacagggtgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCt < 1:2185199‑M1/5‑1 (MQ=255) gcacaggatgtgcttcgcggcatgatgatgttcgcacattggtcctccttaatgatgcgctattttacagatgactaacaaagggttggttttcaTGCCt < 2:25402‑M1/5‑1 (MQ=255) gcacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGcc > 2:436400‑M1/96‑99 (MQ=255) gcacaggaagtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagaagactaacaaagtgttggttttcaTGcc < 2:178387‑M1/4‑1 (MQ=255) cacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCtg < 1:1027069‑M1/6‑1 (MQ=255) cacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCtg > 2:794294‑M1/95‑100 (MQ=255) cacaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggtgttcaTGCCtg > 2:2456727‑M1/95‑100 (MQ=255) acaggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCtga < 1:550341‑M1/7‑1 (MQ=255) caggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCtgat > 1:3715340‑M1/93‑100 (MQ=255) caggatgtgcttcgcggcatgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCtgat < 2:4006726‑M1/8‑1 (MQ=255) cTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCtgat < 1:183018/100‑1 (MQ=255) tttGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCtgatg < 1:2074256/100‑1 (MQ=255) ttGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCtgatga < 2:3138390/100‑1 (MQ=255) ttGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCtgatga < 2:3191197/100‑1 (MQ=255) gAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAAc > 1:2207853/1‑100 (MQ=255) gAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAAc < 1:1137115/100‑1 (MQ=255) gAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGGCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAAc > 1:95026/1‑100 (MQ=255) aaCGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACt < 2:1258102/100‑1 (MQ=255) aaCGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACt < 1:2161619/100‑1 (MQ=255) aCGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTg > 2:1129581/1‑100 (MQ=255) gCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTggg < 1:4122671/100‑1 (MQ=255) aGTATCTTGAAGCGTGAAAAAATGTTTGCTTATCGCAAAATAGTCGATTTAAACAGAGTCAGCCGACAACGGTAAAATTGCCTGATGAACTGGGtt < 2:2859415/96‑1 (MQ=255) gTATATTGAAGCGTTAAAAAATGGCGGCTAAGCGCAAAAAAATCGGTTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCa < 2:3921915/100‑1 (MQ=255) tATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAg < 2:272974/100‑1 (MQ=255) tATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAg < 2:3368858/100‑1 (MQ=255) aTCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAgg < 1:2590168/100‑1 (MQ=255) aTCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAgg > 1:1969130/1‑100 (MQ=255) tattGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGc < 2:627953/98‑1 (MQ=255) tCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGGCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGc < 2:1226166/100‑1 (MQ=255) tgatgatgttcgcacattggtactccttaatgatgcgctattttacagatgactaacaaagtgttggttttcaTGCCTGATGAACTGGGTTTATCAGGCa > 1:3900405‑M1/74‑100 (MQ=255) cTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCa < 1:2028242/100‑1 (MQ=255) ttGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCAt > 2:2516363/1‑100 (MQ=255) tGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATg < 1:8403/100‑1 (MQ=255) tGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATg < 1:679391/100‑1 (MQ=255) gAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGa > 2:3681348/1‑100 (MQ=255) gAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATAAACCCAGTTCATCAGGCaatt < 2:3168969/100‑4 (MQ=37) cGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATAAACCCAGTTCATCAGGCaattttac < 1:1635194/100‑8 (MQ=25) gTTAAAAAATGGTGGTTTATCGCAAAATAGTCGATTTAAACAGAGACAACTGACGACGGTAAAATTGACTGATGAATTGTGTTTATCAGGCATGaaa > 2:213172/1‑97 (MQ=255) gTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAAcn < 2:1960931/100‑2 (MQ=255) gTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAAcc > 1:1323504/1‑100 (MQ=255) aaaaaaTGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAac < 2:2405382/100‑1 (MQ=255) aaaaaaTGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAac < 1:1728417/100‑1 (MQ=255) aaaaaaTGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAac > 1:3348705/1‑100 (MQ=255) aaaaaTGGTGGCTGGTCGCAAGATAGGCGTGTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAAc < 1:1801171/95‑1 (MQ=255) aTGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACttt < 1:875059/100‑1 (MQ=255) ggtggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGt > 1:176069/1‑100 (MQ=255) tggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGACCTGGGTTTATCAGGCATGAAAACCAACACTTTGtt < 2:387875/99‑1 (MQ=255) tggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTa < 2:3007076/100‑1 (MQ=255) ggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAg < 1:2121677/100‑1 (MQ=255) ggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAg > 1:1854694/1‑100 (MQ=255) ggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAg < 2:2376994/100‑1 (MQ=255) ggCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAg < 1:4043335/100‑1 (MQ=255) gCTGATAGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGCTGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAg < 2:2264768/99‑1 (MQ=255) cTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTc < 1:1976056/100‑1 (MQ=255) tGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCa < 2:884396/100‑1 (MQ=255) aTCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATc < 2:2772037/100‑1 (MQ=255) cGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAATTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTg < 2:659577/100‑1 (MQ=255) cGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTg > 2:1373062/1‑100 (MQ=255) cGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTg < 2:3578239/100‑1 (MQ=255) tCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAgcg < 1:2488029/100‑1 (MQ=255) tCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAgcg < 1:3775442/100‑1 (MQ=255) cGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAAATGGGTGTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAACTAgcgc < 2:3709195/100‑1 (MQ=255) gATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGca > 1:1517616/1‑100 (MQ=255) gATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGca < 1:989375/100‑1 (MQ=255) tttAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGcatc > 2:515212/1‑100 (MQ=255) ttAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGcatca < 1:3001043/100‑1 (MQ=255) tAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGcatcat > 1:1540336/1‑100 (MQ=255) aaaCAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCAtt > 1:1284419/1‑100 (MQ=255) aaCAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTa > 2:1829843/1‑100 (MQ=255) aCAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTaa < 2:322125/100‑1 (MQ=255) cAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAg > 1:44488/1‑100 (MQ=255) agagACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAgg < 2:150368/100‑1 (MQ=255) agaCAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAg < 1:2768939/100‑1 (MQ=255) gaCAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGt > 1:3204206/1‑100 (MQ=255) taacaaagtgttggttttcaTGCCTGATAAACCCAGTTCATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTa < 1:145927‑M1/80‑1 (MQ=255) aCAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTATATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTCAGGAGTa > 2:2233647/1‑100 (MQ=255) gCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCa > 1:2333270/1‑100 (MQ=255) gCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCa > 2:3775554/1‑100 (MQ=255) gCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCa > 2:1686619/1‑100 (MQ=255) cTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCaa < 2:523111/100‑1 (MQ=255) aCAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAAtgt < 1:1909782/100‑1 (MQ=255) cAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAAtgtg < 2:1576028/100‑1 (MQ=255) aaCGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGc < 1:269073/100‑1 (MQ=255) aaaTTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatc < 2:3090495/100‑1 (MQ=255) aaTTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatca < 1:2891453/100‑1 (MQ=255) aTTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatcat > 1:137430/1‑100 (MQ=255) ttGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATTATTAAGGAGTACCAATGTGCGAAcatcatc < 2:717084/100‑1 (MQ=255) aTGCCTGATAAACCCAGTTCATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTTCCAATGTGCGAAcatcatc < 2:3263417‑M1/99‑1 (MQ=255) aTGCCTGATAAACCCAGTTCATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatcatc > 2:145925‑M1/2‑100 (MQ=255) aTGCCTGATAAACCCAGTTCATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatcatc < 1:5024‑M1/99‑1 (MQ=255) TGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAAcatcatc > 1:3467156‑M1/1‑99 (MQ=255) | AGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGATCGCAAAATAGTCGATTTAAACAGAGACAGCTGACAACGGTAAAATTGCCTGATGAACTGGGTTTATCAGGCATGAAAACCAACACTTTGTTAGTCATCTGTAAAATAGCGCATCATTAAGGAGTACCAATGTGCGAACATCATCA > NC_000913/1011819‑1012017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |