| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1636407 | 86 (0.570) | 20 (0.160) | 9/146 | NT | 19.2% | intergenic (‑40/‑349) | nohQ/ynfO | pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage |
| ? | NC_000913 | = 1636432 | 98 (0.800) | intergenic (‑65/‑324) | nohQ/ynfO | pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage | |||||
Only 100 of 172 total aligned reads displayed.
CTGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGCC > NC_000913/1636308‑1636506 | cTGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAG < 1:1510189‑M1/100‑1 (MQ=255)cTGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACGTCCATGGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAG < 2:147727‑M1/100‑1 (MQ=255) gAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACagag > 1:580872/1‑100 (MQ=255) tGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGcc > 1:934679/1‑100 (MQ=255) ggTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTGCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGcc < 2:4010325/99‑1 (MQ=25) tACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCaa > 1:2696323/1‑100 (MQ=255) aCGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCaaa > 2:1031918/1‑100 (MQ=255) gATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCCTTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGc < 1:2911944/100‑1 (MQ=255) gATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGATAAAGGAAACGACAGAGGCCCAAAAGc < 1:2537162/100‑1 (MQ=255) gATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGc > 1:540626/1‑100 (MQ=255) aCTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCg < 1:1657468/100‑1 (MQ=255) cTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCCCAGCCACAAACAGAGACAGGAAACAACACAGGCCCAAAAGCTCGt > 1:1804215/1‑100 (MQ=14) cTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCg > 2:2053860/1‑99 (MQ=255) aCCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCa < 1:3357795/100‑1 (MQ=255) aCCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCa < 1:2241846/100‑1 (MQ=255) ccGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAg > 1:1151504/1‑100 (MQ=255) gAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcc < 1:1447428‑M1/100‑25 (MQ=255) aaaTGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctc < 2:1455943‑M1/100‑27 (MQ=255) aaaTGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACc > 1:2961141‑M2/1‑99 (MQ=255) tGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgt > 1:4042553‑M2/1‑96 (MQ=255) cagccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgt < 1:3306836‑M1/100‑33 (MQ=255) gccagcTGCTTTTTGTTGACTTTCATTGTTAATTCCACGGCTAAAAACCGAGATAGGAATCAACAGAGTCGTAAAAACTCGTTTTTAGCGCCTGTc > 2:1897734/1‑96 (MQ=9) gccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgttt < 1:4084660‑M1/100‑35 (MQ=255) gccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgttt < 2:996032‑M1/100‑35 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttc < 2:737236‑M1/100‑36 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAATAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcc < 1:3995956‑M1/100‑37 (MQ=255) agcTGCTTTTTTTTGAGTTCCATTGTTCATTATAAGGCAAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcc < 2:1426470‑M1/99‑37 (MQ=255) gctgctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctt > 2:3070486‑M2/1‑87 (MQ=255) ctgctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttccttt < 2:1785273‑M1/100‑40 (MQ=255) tgctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttc > 1:633715‑M2/1‑85 (MQ=255) gctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttct < 1:2280086‑M2/100‑17 (MQ=255) gctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttct < 1:672108‑M2/100‑17 (MQ=255) ctTTTTGTTGACTTCCATTGGTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgcggaaaacgagcttttgggcctctgtcgttt < 2:4091694‑M1/92‑35 (MQ=255) ctTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcctttctc < 1:1234238‑M1/100‑43 (MQ=255) ctTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcctttctc < 1:2191927‑M1/100‑43 (MQ=255) tttttGTTGACTTCCATTGTTCAATAAACGGAAAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCctttctt < 2:1096827/99‑1 (MQ=14) tttGTTGACTTCCAGTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttaggcctctgtcgtttcctttctctgt < 2:377434‑M1/100‑46 (MQ=255) tgttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAg > 1:206537/1‑100 (MQ=255) gttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgg > 1:2211348/1‑100 (MQ=255) gttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgg > 1:2246820/1‑100 (MQ=255) ttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgttttt < 2:531123‑M1/100‑50 (MQ=255) ttgACTCCCATTGTTCATTCCCCGGCCCATAACAAACACAGGAAACGACCGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTCTCCTTTCTTTTCAgg < 2:1802740/99‑1 (MQ=17) gACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAggggg < 1:3780801/100‑1 (MQ=255) cTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTa > 1:1743021/1‑100 (MQ=255) tCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTAtt > 2:74125/1‑100 (MQ=255) aTTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTta < 1:511472/100‑1 (MQ=255) tGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaa < 2:2785530/100‑1 (MQ=255) tGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCATTTCTTTTCAGGGGGTATTTtaaa > 1:2676929/1‑100 (MQ=255) gTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaat < 2:580868/100‑1 (MQ=255) aTTCCACGGCCAAAAACAGATAAAGGAAACGACAGAGGCCCAAAAGCTCGATGTCAGCACCTGTCTTTTCCTTTCTTTTCAGTGGGTATTTTAAATaaaa > 2:835518/1‑100 (MQ=14) ccACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACa > 2:4004083/1‑100 (MQ=255) cACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatgg < 1:1222920‑M2/100‑45 (MQ=255) cACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACAt < 1:1031922/100‑1 (MQ=255) acaaacAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAAc < 2:2164582/92‑1 (MQ=255) aCGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACAtt < 2:3484854/100‑1 (MQ=255) cGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAGGCTCGTTTTCAGCAGCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTa < 2:827291/100‑1 (MQ=255) cGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTa > 1:936362/1‑100 (MQ=255) cGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTa > 1:3073544/1‑100 (MQ=255) cGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTCTCTTTTCAGGGGGTATTTTAAATAAAAACATTa < 2:2494771/100‑1 (MQ=255) gCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagt < 1:1467515‑M2/100‑49 (MQ=255) gCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAg < 1:846638/100‑1 (MQ=255) cAAAAACAGAGAAAGGAAACGACAGATTCTCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGTGTATTTTAAATAAAAACATTAAGtt < 2:2634345/100‑1 (MQ=14) cAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGtt > 2:621902/1‑100 (MQ=255) aaaaCAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTac > 1:2186495/1‑100 (MQ=255) aaaaCAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTac > 2:1696149/1‑100 (MQ=255) agagAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTAcgacga > 2:623921/1‑100 (MQ=255) agaAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagc > 1:3850000‑M1/1‑16 (MQ=255) agaAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaag > 1:1346953/1‑100 (MQ=255) gaAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagca > 1:3645359‑M1/1‑15 (MQ=255) gaAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaaga > 1:1019064/1‑100 (MQ=255) gaAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaaga < 1:3315993/100‑1 (MQ=255) gaAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaaga < 2:3385420/100‑1 (MQ=255) gaAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaaga < 1:2966584/100‑1 (MQ=255) aaaGGAAACGACAGgtgctgaaaacgaggttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcag < 2:155750‑M1/100‑87 (MQ=255) aaaGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaagaa < 1:4170416/100‑1 (MQ=255) aaGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttttctgtggaatgaacaatggaagtcaacaaaaagcagc > 2:623631‑M1/1‑13 (MQ=255) aaGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagc < 2:280881‑M1/100‑88 (MQ=255) aaGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagc > 2:3070486‑M1/1‑13 (MQ=255) aaGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagc > 2:3354878‑M1/1‑13 (MQ=255) aaGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaagaag < 2:540622/100‑1 (MQ=255) ggACACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtccacaaaaagcagctg > 2:2417929‑M1/1‑11 (MQ=255) ggAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctg > 1:2764483‑M1/1‑11 (MQ=255) ggAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctg < 2:81613‑M2/100‑65 (MQ=255) ggAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctatttttggccgtggaatgaacaatggaagtcaacaaaaagcagctg < 1:3995956‑M2/100‑65 (MQ=255) ggAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCATTTAAGGGGGTATTTTAAATAAAAACATTAAGTTACAACgaagaagaa > 2:2689564/1‑100 (MQ=255) ggAAACGACAGAGGCCAAAAAGCTCGCTTTCAGCACctgtcgtttcctttctctgtttttgtccgtggaatgtgcaatggaagtcaacaaaaagcagctg < 1:3997820‑M2/100‑65 (MQ=255) gacaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACATGTCGTTTACTTACTTTTCCGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAAc < 2:1804205/97‑1 (MQ=14) gAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctgg > 2:934675‑M1/1‑10 (MQ=255) gAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAAc < 1:2981837/100‑1 (MQ=255) gAAACGACAGAGGCCAAAAAGCTCGCTTTCAGCACctgtcgtttcctttctctgtttttgtccgtggaatgtgcaatggaagtcaacaaaaagcagctgg < 1:2984120‑M2/100‑66 (MQ=255) aaaCGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggc < 1:1908523‑M1/100‑92 (MQ=255) aaaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACg < 2:4114130/100‑1 (MQ=40) aaaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACg < 2:672104/100‑1 (MQ=255) aaaCGACAGAGGCCAAAAAGCTCGCTTTCAGCACctgtcgtttcctttctctgtttttgtccgtggaatgtgcaatggaagtcaacaaaaagcagctggc < 1:768458‑M2/100‑67 (MQ=255) aaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACgg > 1:3906383/1‑100 (MQ=255) aCGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctg < 2:3875283‑M1/100‑94 (MQ=255) aCAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAAt > 1:79396/1‑100 (MQ=255) cAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctgacat < 1:3315725‑M1/100‑98 (MQ=255) gagGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGcc > 1:3669383/1‑100 (MQ=255) gagGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGcc > 2:1286932/1‑100 (MQ=255) | CTGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGCC > NC_000913/1636308‑1636506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |