BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3281702 =	NA (NA)	8 (0.060)	6/164	NT	NA	noncoding (1/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3281734 =	NA (NA)	8 (0.060)	6/164	NT	NA	noncoding (33/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 201 total aligned reads displayed.

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

ccTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAcc                                                                                                     <  2:958829/100‑1 (MQ=255)

aggaagcaaaagggattgctggatgcggcgcaaacgctttatccggccttgcggtcaccaactgtagGTCGGATGCGACGCTAACGCGTCTTATCCGAcc                                                                                                     >  1:187421‑M1/68‑100 (MQ=255)

   ttATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTAc                                                                                                  <  1:2836786/100‑1 (MQ=255)

    tATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACa                                                                                                 <  1:3349214/100‑1 (MQ=255)

    tATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACa                                                                                                 <  1:3012397/100‑1 (MQ=255)

    tATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACa                                                                                                 >  1:2866259/1‑100 (MQ=255)

    tATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACa                                                                                                 >  1:2576184/1‑100 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             >  1:3485695/1‑100 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             >  1:1931524/1‑100 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATATGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             >  1:2935963/1‑100 (MQ=255)

         ggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTgg                                                                                            <  1:1625452/100‑1 (MQ=255)

         ggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTGTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTgg                                                                                            <  2:2064324/100‑1 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGGTTTGTGGAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          <  2:1238461/100‑1 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          >  1:1330793/1‑100 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCCCTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          >  1:1528723/1‑100 (MQ=255)

            cTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGt                                                                                           >  2:1273147/1‑98 (MQ=255)

             ttCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        >  2:386178/1‑100 (MQ=255)

              tCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAcc                                                                                       >  2:3748217/1‑100 (MQ=255)

              tCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGCGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAcc                                                                                       <  2:876576/100‑1 (MQ=255)

               cACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCg                                                                                      <  1:1036594/100‑1 (MQ=255)

                 gctggatgcggcgcaaacgctttatccggccttgcggtcaccaactgtagGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        >  1:2569241‑M1/51‑96 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCa                                                                                    >  1:4015489/1‑100 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCa                                                                                    >  1:556808/1‑100 (MQ=255)

                 cTTCCCCCGTAAGGCCTTTCTGTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAcc                                                                                       <  2:2866397/97‑1 (MQ=255)

                     ccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGc                                                                                <  1:2029639/100‑1 (MQ=255)

                     ccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGc                                                                                >  2:931869/1‑100 (MQ=255)

                        cGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCgg                                                                             >  2:3152853/1‑100 (MQ=255)

                         gTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGa                                                                            <  1:3026714/100‑1 (MQ=255)

                          tAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGAt                                                                           <  2:380585/100‑1 (MQ=255)

                            aGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGATCTACAGTTGGTGACCGCAAGGCCGGATaa                                                                         <  2:848636/100‑1 (MQ=255)

                             ggCCTTTCTTTTTTTTTTTTTTTTATCTGTGCAGCGGTGTCGGATACGACTCTAACGCGTCTTATCCGACCTACAGTTTGTGACCGCAAGGCCGGAt                                                                           >  2:4160039/1‑97 (MQ=37)

                              gCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAg                                                                       <  1:682599/100‑1 (MQ=255)

                                ctttctttTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCg                                                                     <  1:3211714/100‑1 (MQ=255)

                                ctttctttTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCg                                                                     <  1:1256505/100‑1 (MQ=255)

                                   tctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGttt                                                                  >  2:2152093/1‑100 (MQ=255)

                                   tctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGttt                                                                  <  2:2178316/100‑1 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  1:3617107/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  2:2644843/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  2:1925240/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 <  1:477881/100‑1 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 <  2:344871/100‑1 (MQ=255)

                                      ttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTgcg                                                               >  1:3937047/1‑100 (MQ=255)

                                        ttctttcGTTTTGATCTGTGCAGCGGTGTCGGATGTGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgcc                                                             >  2:1631185/1‑100 (MQ=255)

                                         tctttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgccg                                                            <  2:531677/100‑1 (MQ=255)

                                           tttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCa                                                          <  1:4063860/100‑1 (MQ=255)

                                            ttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCAt                                                         >  1:504997/1‑100 (MQ=255)

                                              cGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATcc                                                       >  2:1693150/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  2:4109000/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  2:308925/1‑100 (MQ=255)

                                                 tttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGc                                                    >  2:3680239/1‑100 (MQ=255)

                                                 tttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGc                                                    <  1:2444109/100‑1 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGGGCCGCATCCAGCAAt                                                 >  1:4108799/1‑100 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCaa                                                  >  2:2980890/1‑99 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAAt                                                 >  1:109942/1‑100 (MQ=255)

                                                    gATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAAt                                                 >  1:959406/1‑100 (MQ=255)

                                                      tCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATcc                                               <  1:3995423/100‑1 (MQ=255)

                                                       cTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATccc                                              >  1:885994/1‑100 (MQ=255)

                                                         gtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtt                                            <  1:1203715/100‑1 (MQ=255)

                                                         gtgCAGCGGTGTCGGATGCGACGCTAACGAGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCacgttttctg                                             >  1:914631/1‑90 (MQ=38)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  1:1656856/1‑100 (MQ=255)

                                                             aGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGc                                        <  2:3937017/100‑1 (MQ=255)

                                                                ggTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCGCTTTTGCTTc                                     >  1:2554815/1‑100 (MQ=255)

                                                                 gtgtCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTcc                                    <  2:4001556/100‑1 (MQ=255)

                                                                  tgtCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCt                                   <  1:3123097/100‑1 (MQ=255)

                                                                  ggtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGAAAGGCCGGATAACGCGTTCGAGCCGCATCCAGCAATACCTTTTGCATcc                                    >  2:1856647‑M2/34‑99 (MQ=255)

                                                                   gtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  1:58153‑M2/33‑100 (MQ=255)

                                                                   atctGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  2:478468‑M1/5‑100 (MQ=255)

                                                                    TCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCttt                                 >  2:3327964‑M1/1‑100 (MQ=255)

                                                                     CGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTa                                >  2:1181616‑M1/1‑100 (MQ=255)

                                                                      GGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAt                               <  2:1231444‑M1/100‑1 (MQ=255)

                                                                       gataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCAAGCAATCCCTTTTGCTTCCTTTAtc                              >  1:3242726‑M2/29‑100 (MQ=255)

                                                                        ATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCt                             <  1:1773625‑M1/100‑1 (MQ=255)

                                                                         TGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCtt                            <  2:1134992‑M1/100‑1 (MQ=255)

                                                                         TGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCtt                            <  1:1671871‑M1/100‑1 (MQ=255)

                                                                          gCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttt                           <  1:2249797/100‑1 (MQ=255)

                                                                           cGACGCTAACGCGTCTTATCCGCCCTACAGTTGGTGACCGCCAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCACTCCCTTTTGCTTCCTTTAtctttt                          >  2:258097/1‑100 (MQ=255)

                                                                           cGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtctttt                          >  1:1555660/1‑100 (MQ=255)

                                                                           cGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTGCCTTTAtctttt                          >  1:1905465/1‑100 (MQ=255)

                                                                             aCGCTAACGCGTCTTATCCGGCCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttct                        >  2:2542918/1‑100 (MQ=255)

                                                                             aCGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttct                        <  1:1992163/100‑1 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCACTCCCTTTTGCATCCTTTAtcttttctt                       >  2:3108178/1‑100 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       <  2:3631664/100‑1 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       >  1:2542719/1‑100 (MQ=255)

                                                                               gCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttcttt                      >  1:3176524/1‑100 (MQ=255)

                                                                                 tAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTCCCTTTAtcttttcttt                      >  1:2693327/1‑98 (MQ=255)

                                                                                  aaCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTtttctttcca                   >  2:2729433/1‑98 (MQ=255)

                                                                                   aCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAAc                  <  1:3680266/100‑1 (MQ=255)

                                                                                   aCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAAc                  <  2:2776778/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACg                 <  1:1951541/100‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGAt               >  2:1654866/1‑100 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  2:3813810/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATACCCTTTGCTTCCTTTATCTTTTCTTTCAACGATca             >  2:1831100/1‑100 (MQ=255)

                                                                                         cTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCACCCTTTATCTTTTCTTTCAACCATca             >  2:3426615/1‑99 (MQ=255)

                                                                                            atccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTACCTTTATCTTTTCTTTCAACGATCACaaa         >  2:3355468‑M2/8‑100 (MQ=255)

                                                                                               cgacCTACAGTTGGTTACCGCAAGGCCTTATAAAGCGTTTGCGCCGCATCCAGCAATCCCTCTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAAttt      <  2:2408078‑M2/96‑1 (MQ=255)

                                                                                                gacCTACAGTTGGTGACCGCAAGGCCGGATAATGCTTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTTTTTCAACGATCACAAATTTc     <  2:1357016‑M2/97‑1 (MQ=255)

                                                                                                 acCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCg    >  2:3878637‑M2/3‑100 (MQ=255)

                                                                                                  cCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGt   >  2:234557‑M2/2‑100 (MQ=255)

                                                                                                  cCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTATTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGt   >  2:584846‑M2/2‑100 (MQ=255)

                                                                                                   cTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGtt  >  1:997344/1‑100 (MQ=255)

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.