New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4148478NA (NA)13 (0.090) 9/164 NT NA noncoding (49/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4148511 NA (NA)noncoding (82/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 256 total aligned reads displayed.

CATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTACCAATC  >  NC_000913/4148412‑4148610
                                                                                                   |                                                                                                   
    gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                                                                 <  1:2975900/100‑1 (MQ=255)
      ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg                                                                                               >  1:3762936/1‑100 (MQ=255)
          gTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGcc                                                                                           >  2:3984475/1‑100 (MQ=255)
             gTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTgg                                                                                        >  2:1219343/1‑100 (MQ=255)
               aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                                                                      <  2:2644319/100‑1 (MQ=255)
                ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACAGCCGCGATATGTAGGCCGGCTAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                                                     >  1:4028550/1‑100 (MQ=255)
                 tGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                                                    >  1:752170/1‑100 (MQ=255)
                  gCCGGATGTGGCGTAAACGCCTTATCCAGCCTCCCCCCGCACTCCCTACGCCGGGAAAGACCCGTCATGCGTCGCATCCGGCAAAtcg                                                                                               >  2:7808/1‑86 (MQ=16)
                   ccGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATa                                                                                  >  1:2038043/1‑100 (MQ=255)
                    cGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATaa                                                                                 >  2:3549751/1‑100 (MQ=255)
                      gATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAAtt                                                                               >  1:2585230/1‑100 (MQ=255)
                       aggtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTa                                                                              >  2:615287/3‑100 (MQ=255)
                        tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                                                             <  2:715560/100‑1 (MQ=255)
                          tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                                                           <  1:207633/100‑1 (MQ=255)
                           ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                                                          >  1:3517815/1‑100 (MQ=255)
                              gTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTa                                                                       <  2:4076196/100‑1 (MQ=255)
                               tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                                                                      <  1:234937/100‑1 (MQ=255)
                                aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                                                                     <  2:3769130/100‑1 (MQ=255)
                                 aaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGACTAccc                                                                    >  1:1852168/1‑100 (MQ=255)
                                  aCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                                                   >  1:2422429/1‑100 (MQ=255)
                                  aCGCCTTATCCAGCCTACCGCCGCGATCTGTAAGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                                                   >  2:3187303/1‑100 (MQ=255)
                                    gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                                                 <  1:2719029/100‑1 (MQ=255)
                                     ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                                                                <  1:1571004/100‑1 (MQ=255)
                                         aTCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATc                                                            >  2:3699030/1‑100 (MQ=255)
                                          tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                                                           <  2:1513806/100‑1 (MQ=255)
                                          tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                                                           <  2:2467449/100‑1 (MQ=255)
                                          tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                                                           <  1:100413/100‑1 (MQ=255)
                                           ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                                                          >  2:243831/1‑100 (MQ=255)
                                           ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                                                          >  1:2517751/1‑100 (MQ=255)
                                              gCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt                                                       >  1:633785/1‑100 (MQ=255)
                                                cTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAg                                                     >  1:3343560/1‑100 (MQ=255)
                                                 tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                                                    >  2:2080007/1‑100 (MQ=255)
                                                 tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                                                    <  1:3221137/100‑1 (MQ=255)
                                                  aCCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAggg                                                   >  1:2270102/1‑100 (MQ=255)
                                                   ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                                                  <  1:2535821/100‑1 (MQ=255)
                                                    cgccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCa                                                 >  2:3457649/1‑100 (MQ=255)
                                                     gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg                                                <  1:1306713/100‑1 (MQ=255)
                                                     gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg                                                >  2:1802844/1‑100 (MQ=255)
                                                          gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt                                           >  1:2991433/1‑100 (MQ=255)
                                                            tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg                                         <  2:3517563/100‑1 (MQ=255)
                                                            tCTGTAGGCCGGATAAGACACGTCAAGCGTCGCATCCGGCACATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg                                         >  2:2874936/1‑100 (MQ=255)
                                                             cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGTAAATAGAGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCGTAGGGCAGTGTGTCGt                                        >  2:3104979/1‑100 (MQ=255)
                                                             cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt                                        <  1:833368/100‑1 (MQ=255)
                                                             cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt                                        >  1:649761/1‑100 (MQ=255)
                                                              tGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTa                                       <  1:2299462/100‑1 (MQ=255)
                                                               gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgc                                      <  1:3429502‑M2/100‑64 (MQ=255)
                                                               gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgc                                      <  1:2131998‑M2/100‑64 (MQ=255)
                                                                tAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgca                                     <  1:3583476‑M2/100‑65 (MQ=255)
                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaa                                    <  1:3183343‑M2/100‑66 (MQ=255)
                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc                                    >  2:1349535/1‑100 (MQ=255)
                                                                  tgCCGGATGCGACGCTTGACGCGTCTTATCCGGCAAATAGCGCCTGGCTGATAGTTACTGATTACCCACCTGATCGCCATAGAGCAGTGTGTCGTAATc                                    >  2:3650690/2‑99 (MQ=21)
                                                                  ggCCGGATAAGACGCGTCAAGCGTCGCATCTGGGctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacatctgccgcaat                                   <  2:2747487‑M2/100‑67 (MQ=255)
                                                                  ggCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc                                    >  2:570220/1‑99 (MQ=255)
                                                                   tccGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGa                                  <  2:53795/99‑1 (MQ=255)
                                                                   gCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatg                                  <  1:531728‑M2/100‑68 (MQ=255)
                                                                   gCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAATGTGTCGTAATCGa                                  <  2:215555/100‑1 (MQ=255)
                                                                     cGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATc                                >  1:1379269/1‑100 (MQ=255)
                                                                      ggATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgttt                               <  2:1044798‑M2/100‑71 (MQ=255)
                                                                      ggATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCa                               <  1:947818/100‑1 (MQ=255)
                                                                      ggATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCa                               <  1:1948771/100‑1 (MQ=255)
                                                                       gATAAGCCGCGTCAAGCGTCGAAACCGCAAAATAGCGCCTGGCTGAGAATTAGGGATTCCCCGCCTGATCGCCATAGGGCAGTGTGTCGTAATTGATCat                              <  2:1590238/100‑2 (MQ=255)
                                                                         tAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTg                            <  2:1438329/100‑1 (MQ=255)
                                                                         tAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTg                            <  1:1896206/100‑1 (MQ=255)
                                                                          aaGACGCGACAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGc                           <  2:1180663/100‑1 (MQ=255)
                                                                           aGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGCTCAGTGCg                          >  1:3476017/1‑100 (MQ=255)
                                                                           aGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCg                          <  1:1363723/100‑1 (MQ=255)
                                                                           aGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCg                          <  2:1828731/100‑1 (MQ=255)
                                                                           aGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCg                          <  1:2165480/100‑1 (MQ=255)
                                                                            gACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTCCCCACCTGATCGCCATAGGGCGGTGTGTCGTAATCGATCAGTGCGt                         >  1:1815433/1‑100 (MQ=255)
                                                                            gACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGt                         >  1:3267401/1‑100 (MQ=255)
                                                                                cgTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgtttacatcgaact                     <  1:1176151‑M2/100‑81 (MQ=255)
                                                                                cgTCAAGCGTCGCATCCGGCAAAAAGCGCCGGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGACAGTGTGTCGTAATAGATCAGTCCGttt                       >  2:3239574/1‑98 (MQ=255)
                                                                                 gTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTc                    <  1:3995448/100‑1 (MQ=255)
                                                                                 gTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTc                    >  1:448101/1‑100 (MQ=255)
                                                                                 gTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTc                    <  1:2791052/100‑1 (MQ=255)
                                                                                  tCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCt                   <  1:3953330/100‑1 (MQ=255)
                                                                                   cAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCtt                  >  2:427039/1‑100 (MQ=255)
                                                                                   cAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCtt                  >  1:4053840/1‑100 (MQ=255)
                                                                                    aaGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTta                 <  1:3909828/100‑1 (MQ=255)
                                                                                      gCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTtata               >  1:1701831/1‑100 (MQ=255)
                                                                                        gTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACg             <  1:498286/100‑1 (MQ=255)
                                                                                         tCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACgg            <  2:2529516/100‑1 (MQ=255)
                                                                                          cGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACggg           >  1:546753/1‑100 (MQ=255)
                                                                                           gCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACggg           >  1:724114/1‑99 (MQ=255)
                                                                                           gCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGt          >  2:2903477/1‑100 (MQ=255)
                                                                                           gCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGt          <  2:685525/100‑1 (MQ=255)
                                                                                            cATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGtt         <  1:1984070/100‑1 (MQ=255)
                                                                                             aTCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgtttacatcgaactcccctcaggccac        <  2:2254830‑M2/100‑94 (MQ=255)
                                                                                             aTCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacagccgtcaatacaactgccgcaatgtttacatcgaactcccctcaggccac        >  2:1435878‑M2/1‑7 (MQ=255)
                                                                                             aTCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTa        <  2:3762908/100‑1 (MQ=255)
                                                                                             aTCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTa        >  1:1240760/1‑100 (MQ=255)
                                                                                              tCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgtttacatcgaactcccctcaggccaca       <  2:266993‑M2/100‑95 (MQ=255)
                                                                                              tCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTAc       <  1:1519347/100‑1 (MQ=255)
                                                                                              tCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTAAACGGGTTAc       <  2:888948/100‑1 (MQ=255)
                                                                                               ccGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTAcc      >  1:3849365/1‑100 (MQ=255)
                                                                                               ccGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTAcc      >  1:3686202/1‑100 (MQ=255)
                                                                                                 ggCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgtttacatcgaactcccctcaggccacactt    >  2:3332074‑M2/1‑3 (MQ=255)
                                                                                                  gCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaatgtttacatcgaactcccctcaggccacacttt   >  2:3953300‑M2/1‑2 (MQ=255)
                                                                                                  gCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTACCAAt   <  2:459955/100‑1 (MQ=255)
                                                                                                   cAAATAGCGCCTCGCTGATCATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTACCAATc  >  2:2016345/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCGATCAGTGCGTTTTTCTTATACGGGTTACCAATC  >  NC_000913/4148412‑4148610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.