New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4344813 =NA (NA)13 (0.100) 7/160 NT NA intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein
?NC_000913 4344842 = NA (NA)noncoding (28/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 199 total aligned reads displayed.

TTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATC  >  NC_000913/4344744‑4344941
                                                                                                  |                                                                                                   
tgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                                                    >  1:930904‑M1/70‑100 (MQ=255)
tgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                                                    >  1:3200098‑M1/70‑100 (MQ=255)
tgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                                                    >  1:2280628‑M1/70‑100 (MQ=255)
 tCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGt                                                                                                   <  1:1905637/100‑1 (MQ=255)
 gccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGt                                                                                                   >  1:3604606‑M1/69‑100 (MQ=255)
   aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCt                                                                                                 >  2:3842733/1‑100 (MQ=255)
    tGCTGTTCTTCCGTCCCGCGCCGTGAGTGATTTGCCCGCCTGACGTCGCCAACTCCTAACCACTCTGGCCTGCTGCCATATGTTTATCAGGCCCCGTCt                                                                                                 <  2:2986621/99‑1 (MQ=255)
      cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                                              >  1:942974/1‑100 (MQ=255)
         atatTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgt                                                                                           <  1:3669025/100‑1 (MQ=255)
            ttCCTGTCGGCTCAGTGAGGAAGGTAACAGCCTGTCGTGGACTATAGCTAACGTCAATGACCTGATGCTTTATGTTTATCAGGCCACTTCTtaatgtaa                                                                                         <  2:3742789/99‑1 (MQ=255)
            ttCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaat                                                                                        <  1:243219/100‑1 (MQ=255)
                ggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCtt                                                                                    >  2:224925/1‑100 (MQ=255)
                 gtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCttt                                                                                   >  2:2848968/1‑100 (MQ=255)
                  tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                                                  <  1:4119169/100‑1 (MQ=255)
                  tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                                                  >  2:2770974/1‑100 (MQ=255)
                   cggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTgg                                                                                 <  1:4047861/100‑1 (MQ=255)
                    ggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGa                                                                                >  1:2551503/1‑100 (MQ=255)
                    ggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGa                                                                                >  2:905941/1‑100 (MQ=255)
                     gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAt                                                                               <  1:2058528/100‑1 (MQ=255)
                      tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                                              <  1:3644265/100‑1 (MQ=255)
                      tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                                              <  1:642413/100‑1 (MQ=255)
                      tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                                              <  2:3039444/100‑1 (MQ=255)
                        gctcttccgaTCTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                                                            <  2:202415/92‑1 (MQ=255)
                        cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                                                            <  1:3839379/100‑1 (MQ=255)
                        cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                                                            <  1:3203062/100‑1 (MQ=255)
                        cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                                                            <  1:1808369/100‑1 (MQ=255)
                        cAGGGAGAGATGTGAAAGCCTGACGTTGACAATAGCTACCGAACATGGCCTGATGCGATATGTTTATCACGCCACGTCTTACTGGCATGCTTCggct                                                                               >  2:3170867/1‑95 (MQ=255)
                         agtgagtgATGTTAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGc                                                                           <  1:4032829/100‑1 (MQ=255)
                         agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAACATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                                                            <  1:862503/99‑1 (MQ=255)
                         agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGc                                                                           <  2:2128883/100‑1 (MQ=255)
                          gtgagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGTCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCa                                                                          <  2:2035166/100‑1 (MQ=255)
                               tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAttt                                                                     <  1:3939379/100‑1 (MQ=255)
                                 aTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                   <  1:3053486/100‑1 (MQ=255)
                                 aTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                   <  1:1619226/100‑1 (MQ=255)
                                  tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTACTGTAATGCTTTGGATTTGCAAATTTTGt                                                                  >  2:2750849/1‑100 (MQ=255)
                                   gtgAAATCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                   <  1:71185/98‑1 (MQ=255)
                                   gtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTa                                                                 <  2:3782537/100‑1 (MQ=255)
                                    tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                >  2:4151904/1‑100 (MQ=255)
                                    tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                <  2:1157766/100‑1 (MQ=255)
                                    tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                <  2:1027166/100‑1 (MQ=255)
                                     gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                                               >  2:3496672/1‑100 (MQ=255)
                                       aaGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAcc                                                             <  1:1472602/100‑1 (MQ=255)
                                        aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCACATTTTGTAGACCg                                                            <  1:2804894/100‑1 (MQ=255)
                                        aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccn                                                            <  1:3014523/100‑2 (MQ=255)
                                         gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTgagatcgga                                                           >  2:3330847/1‑92 (MQ=255)
                                         gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGGATCTCAGGCCACGTCTTAATGTAATGCATTAGATTTGCAAATTTTGTAAACCgg                                                           >  2:3670615/1‑100 (MQ=255)
                                          ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGa                                                          >  1:1200682/1‑100 (MQ=255)
                                             taCGTGGACAATAGCTAACGAAAATGGCCTCATGCGACATGTTTATCAGGCCACGTCTTAAAGTAATGCTTGGGATTTGCAAATTTTGTAGACCGTATaa                                                       >  2:1859905/2‑100 (MQ=255)
                                             gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                                                       >  1:3721378/1‑100 (MQ=255)
                                              aCGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAg                                                      <  2:1735238/100‑1 (MQ=255)
                                               cGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAgg                                                     >  1:882677/1‑100 (MQ=255)
                                                  ggACAATAGCTAACGAAAATGGCCTGATGCGATTTGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                                                  <  2:825753/100‑1 (MQ=255)
                                                  ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                                                  >  1:759976/1‑100 (MQ=255)
                                                  ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                                                  >  1:2955838/1‑100 (MQ=255)
                                                  ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTACACCGGATAAGGAAt                                                  >  2:1000118/1‑100 (MQ=255)
                                                     gcattacattaagacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               >  1:373663‑M2/46‑100 (MQ=255)
                                                     cAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               <  1:556720/100‑1 (MQ=255)
                                                     cAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               >  2:1567238/1‑100 (MQ=255)
                                                      aaTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAc                                              <  2:3459233/100‑1 (MQ=255)
                                                       aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcg                                             <  2:4077056/100‑1 (MQ=255)
                                                       aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcg                                             <  2:2822416/100‑1 (MQ=255)
                                                         aGCTAACGAAAATGGCCTGATGCGCTATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc                                            <  1:3322232/99‑1 (MQ=255)
                                                         aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgtc                                           <  1:3347643/100‑3 (MQ=255)
                                                         aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc                                           >  2:1506490/1‑100 (MQ=255)
                                                         aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc                                           <  2:596190/100‑1 (MQ=255)
                                                          gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                          <  1:2778889/100‑1 (MQ=255)
                                                               cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                     >  1:1690022/1‑100 (MQ=255)
                                                               cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                     >  1:3124063/1‑100 (MQ=255)
                                                               cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                     >  2:2481632/1‑100 (MQ=255)
                                                               cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                     >  1:2046394/1‑100 (MQ=255)
                                                                 aaaaTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgn                                   <  1:1004512/100‑2 (MQ=255)
                                                                   cgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                 >  1:3574849‑M2/32‑100 (MQ=255)
                                                                   cgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                 >  1:35875‑M2/32‑100 (MQ=255)
                                                                   aaTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                 <  1:4172402/100‑1 (MQ=255)
                                                                    gtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt                                >  1:222601‑M2/31‑100 (MQ=255)
                                                                     tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGTATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt                                >  2:1361237‑M2/30‑99 (MQ=255)
                                                                     TGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc                               >  1:2614696‑M1/1‑100 (MQ=255)
                                                                      GGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATca                              >  2:1923478‑M1/1‑100 (MQ=255)
                                                                         CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca                           >  2:548093‑M1/1‑100 (MQ=255)
                                                                            ATGCGATATGTTTATTAGGCTACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTTTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAg                        >  2:2415930‑M1/1‑100 (MQ=255)
                                                                              gCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg                      >  1:2009789/1‑100 (MQ=255)
                                                                               cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcgc                     >  1:720972/1‑100 (MQ=255)
                                                                                gATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCa                    >  2:3378648/1‑100 (MQ=255)
                                                                                  tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg                  <  2:3987560/100‑1 (MQ=255)
                                                                                  tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg                  >  1:3409922/1‑100 (MQ=255)
                                                                                    tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt                >  1:539656/1‑100 (MQ=255)
                                                                                    tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt                >  2:743518/1‑100 (MQ=255)
                                                                                    tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt                >  1:1370661/1‑100 (MQ=255)
                                                                                     gTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttg               >  1:314269/1‑100 (MQ=255)
                                                                                      tttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgt              <  2:371616/100‑1 (MQ=255)
                                                                                        tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa            >  2:1127090/1‑100 (MQ=255)
                                                                                        tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa            >  2:1105916/1‑100 (MQ=255)
                                                                                        tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa            >  2:1060017/1‑100 (MQ=255)
                                                                                         atcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTAt           <  1:3496082‑M2/91‑1 (MQ=255)
                                                                                           caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc         >  2:1333410‑M2/8‑100 (MQ=255)
                                                                                           caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc         >  1:1009218‑M2/8‑100 (MQ=255)
                                                                                              gccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGt      <  2:305480‑M2/96‑1 (MQ=255)
                                                                                              gccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGt      <  2:4022212‑M2/96‑1 (MQ=255)
                                                                                                caCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTa    >  1:3369797‑M2/3‑100 (MQ=255)
                                                                                                 aCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTAt   >  1:2317058‑M2/2‑100 (MQ=255)
                                                                                                  |                                                                                                   
TTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATC  >  NC_000913/4344744‑4344941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.