BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4601572 =	175 (1.160)	7 (0.050)	7/162	NT	4.5%	intergenic (‑55/+52)	dnaT/yjjB	DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
*	?	NC_000913	4601608 =	135 (0.990)	7 (0.050)	7/162	NT	4.5%	intergenic (‑91/+16)	dnaT/yjjB	DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 200 total aligned reads displayed.

GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707

ggAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGc                                                                                                     <  2:421253/100‑1 (MQ=255)

 ttccattcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCt                                                                                                    >  1:391832‑M1/63‑100 (MQ=255)

 gAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCt                                                                                                    >  1:1741767/1‑100 (MQ=255)

     attcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAg                                                                                                >  1:2162132‑M1/59‑100 (MQ=255)

     aCATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAg                                                                                                <  1:1935412/100‑1 (MQ=255)

      gaTACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCAGTGTGCTTAAGc                                                                                               >  2:3491907/2‑100 (MQ=255)

      cATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGc                                                                                               <  1:2247758/100‑1 (MQ=255)

       aTACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              >  2:2453285/1‑100 (MQ=255)

       aTACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              <  2:3759309/100‑1 (MQ=255)

       aTACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              <  1:3641550/100‑1 (MQ=255)

        tACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGTAGAGGATGCGGTCTCTCATCCGTGTGCTTAAGCg                                                                                              >  1:190331/1‑99 (MQ=255)

        tACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGa                                                                                             <  1:4095162/100‑1 (MQ=255)

         aCTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAg                                                                                            <  1:915169/100‑1 (MQ=255)

          cgtgttCTCAAAGATGGAACGATTATCGAGTAGGCAGATCACTTTTATAGTAATACACGGAGGAGAGGCGGCTGGCTCTCATCCGTGTGCGTAAGc                                                                                               <  2:1605125/92‑1 (MQ=255)

           tGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGc                                                                                          >  1:3989355/1‑100 (MQ=255)

           tGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGc                                                                                          >  1:2651813/1‑100 (MQ=255)

               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtt                                                                                      <  1:3855600/100‑1 (MQ=255)

               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTATATAGTAACACACGGAGGAGTGGAGACTGTCTCTCATACGTGTGCTTAAGCGAGGCa                                                                                         >  2:2928244/1‑97 (MQ=255)

                ttccgatctGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAttt                                                                                     <  2:3930784/92‑1 (MQ=255)

                ctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAttt                                                                                     <  1:1834279/100‑1 (MQ=255)

                ctaaactctGGAACGATGAAAGAAAAGAGAGATAAAGTTTATAGTAAAGCACGGAGCAAAGAAGAATGAATATAATCCGTGTGCTTAAGCAAGGCAAtt                                                                                      >  2:1998501/9‑99 (MQ=255)

                  cAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGCGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTta                                                                                   >  2:3554360/1‑100 (MQ=255)

                  cAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTta                                                                                   >  2:859192/1‑100 (MQ=255)

                  cAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTta                                                                                   >  2:3524008/1‑100 (MQ=255)

                      tatGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAcg                                                                               >  1:3413592/1‑100 (MQ=255)

                      tatGGAACGATGAACGAGAAGGGAGATAACGTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAcg                                                                               <  1:274591/100‑1 (MQ=255)

                       atGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAcgc                                                                              >  1:3994287/1‑100 (MQ=255)

                         ggAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtttagatcggaa                                                                            >  1:3930814/1‑91 (MQ=255)

                          gAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAg                                                                           <  2:1335800/100‑1 (MQ=255)

                          gAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAg                                                                           >  1:1609755/1‑100 (MQ=255)

                           aaCGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAgg                                                                          >  2:1652124/1‑100 (MQ=255)

                           aaCGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAgg                                                                          >  2:3874993/1‑100 (MQ=255)

                            aCGATGAACGAGAAGGGAGATATCTTTTATAGTAACACACGGAGGAGAGGAGGCTCTCTCTCATCCGTGTGCTTAAGCGAGGc                                                                                          <  2:3316049/83‑1 (MQ=255)

                             cGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgc                                                                        <  2:1457551/100‑1 (MQ=255)

                             cGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTATCTCATCCGTGTGCTTAAGAGAGGCAACTTTATACGCGAAGgc                                                                        <  2:1231211/100‑1 (MQ=255)

                              gttGAACGAGAAGGGAGATAACTTGTATAGTAACACACGGAGGAGAGGATGCTGACTCTCATCCGTGTGCTTAAGCGAGGCAATGTTAGACGCGAggg                                                                         <  2:948090/96‑1 (MQ=255)

                              gATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgcg                                                                       <  1:1631598/100‑1 (MQ=255)

                               aTGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgcgc                                                                      >  1:3246135/1‑100 (MQ=255)

                                tGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCt                                                                     <  2:1943313/100‑1 (MQ=255)

                                  aaCGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCt                                                                     >  1:1425007/1‑98 (MQ=255)

                                    cGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCg                                                                 >  2:3445039/1‑100 (MQ=255)

                                      agaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               >  1:3779818/1‑100 (MQ=255)

                                      agaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               >  2:1325526/1‑100 (MQ=255)

                                       gaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGTGGCAATTTTATACGCGATGGCGCTTGCggca                                                              <  1:2807989/100‑3 (MQ=255)

                                       gaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTa                                                              <  1:3638438/100‑1 (MQ=255)

                                         aGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACa                                                            >  1:2875731/1‑100 (MQ=255)

                                         aGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACa                                                            >  1:2386010/1‑100 (MQ=255)

                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACTCGAGGGCGCTTGCGGTACAAcc                                                         >  2:2528675/1‑100 (MQ=255)

                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAcc                                                         <  1:1303059/100‑1 (MQ=255)

                                             agaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCa                                                        >  1:373495/1‑100 (MQ=255)

                                             agaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCa                                                        >  2:4147419/1‑100 (MQ=255)

                                                  aCTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCACTTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   >  1:1063187/1‑100 (MQ=255)

                                                  aCTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   >  1:3240489/1‑100 (MQ=255)

                                                  aCTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   >  1:363015/1‑100 (MQ=255)

                                                   cTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  >  1:432846/1‑100 (MQ=255)

                                                   cTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  >  1:3101957/1‑100 (MQ=255)

                                                       tataGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGa                                              >  2:1083176/1‑100 (MQ=255)

                                                        gcttaagcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGaa                                             >  2:3611341‑M2/44‑100 (MQ=255)

                                                           taagcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  1:446590‑M2/41‑100 (MQ=255)

                                                           gTAACACGCGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  1:2190903/1‑100 (MQ=255)

                                                             aaCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaa                                        >  1:3225021/1‑100 (MQ=255)

                                                              gcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaaa                                       >  2:1543532‑M2/38‑100 (MQ=255)

                                                              acacacGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaaa                                       <  1:3827568/100‑1 (MQ=255)

                                                              acacacGGAGGAGAGGAGGCTGTCTCTCAGCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaaa                                       <  2:623987/100‑1 (MQ=255)

                                                               cacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      >  2:3142825‑M2/37‑100 (MQ=255)

                                                               CACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      >  1:764123‑M1/1‑100 (MQ=255)

                                                               CACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      <  1:2919591‑M1/100‑1 (MQ=255)

                                                                 cacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    >  1:1249886‑M2/35‑100 (MQ=255)

                                                                 CACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    <  1:244138‑M1/100‑1 (MQ=255)

                                                                 CACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    >  1:611268‑M1/1‑100 (MQ=255)

                                                                  ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAcc                                   >  2:1700501‑M1/1‑100 (MQ=255)

                                                                      AGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATg                               >  1:2512801‑M1/1‑100 (MQ=255)

                                                                         agaggagGCTGTCGCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGAt                            <  2:2898377/100‑1 (MQ=255)

                                                                             gaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACg                        <  1:2555704/100‑1 (MQ=255)

                                                                               ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  2:3382266/1‑100 (MQ=255)

                                                                               ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  1:1896063/1‑100 (MQ=255)

                                                                               ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  2:2369299/1‑100 (MQ=255)

                                                                                gCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAc                     <  2:3413566/100‑1 (MQ=255)

                                                                                 cTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAcc                    >  2:2028884/1‑100 (MQ=255)

                                                                                 cTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAcc                    <  1:3522678/100‑1 (MQ=255)

                                                                                 cTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAcc                    >  1:49357/1‑100 (MQ=255)

                                                                                 cTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAcc                    <  1:2092031/100‑1 (MQ=255)

                                                                                  tGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACca                   <  2:1963687/100‑1 (MQ=255)

                                                                                    tctctcATCCGTGTTCTTAAGCGAATACAGTTGATACCCGAGGGCGCGTCCGGTAAAACCATAATCCAGCAATGCAAAGACCGATGGATAACACACcaac                 <  2:1807816/100‑1 (MQ=255)

                                                                                     ctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACtaaca                >  2:2714019/1‑100 (MQ=255)

                                                                                     ctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaaca                >  1:635369/1‑100 (MQ=255)

                                                                                       ctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAAt              >  2:2301248/1‑100 (MQ=255)

                                                                                        tcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             <  2:190328/100‑1 (MQ=255)

                                                                                        tcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             <  1:401413/100‑1 (MQ=255)

                                                                                        tcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             <  2:3122826/100‑1 (MQ=255)

                                                                                        tcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             >  2:438266/1‑100 (MQ=255)

                                                                                        tcATCCGTGTACTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             <  1:3040223/100‑1 (MQ=255)

                                                                                            ccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGCATGGAAAGACCGATGGATAACGCACCAACAATCGATg         >  2:2814371‑M2/8‑100 (MQ=255)

                                                                                                gtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAg      >  2:3822177‑M2/4‑99 (MQ=255)

                                                                                                gtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGc     <  1:1547159‑M2/97‑1 (MQ=255)

                                                                                                 tgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGAGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAg      >  2:2227696‑M2/3‑98 (MQ=255)

                                                                                                  gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   <  2:3989325‑M2/99‑1 (MQ=255)

                                                                                                  gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   >  1:680295‑M2/2‑100 (MQ=255)

                                                                                                  gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   <  2:1172881‑M2/99‑1 (MQ=255)

                                                                                                   cTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGt  >  2:2537074/1‑100 (MQ=255)

GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.