BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4636885	156 (1.040)	11 (0.080)	5/168	NT	6.8%	coding (190/1425 nt)	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB
*	?	NC_000913	= 4636902	154 (1.090)	11 (0.080)	5/168	NT	6.8%	coding (207/1425 nt)	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB
Rejected: Frequency below cutoff threshold.

Only 100 of 192 total aligned reads displayed.

AGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGG  >  NC_000913/4636803‑4637000

 gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAg                                                                                                    <  1:873892/99‑1 (MQ=255)

  cAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgc                                                                                                  <  1:2698851‑M2/100‑3 (MQ=255)

   aaCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcg                                                                                                 <  2:1181190‑M2/100‑4 (MQ=255)

    aCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgt                                                                                                >  1:960867‑M2/1‑96 (MQ=255)

    aCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgt                                                                                                <  2:3042803‑M2/100‑5 (MQ=255)

     cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgtt                                                                                               >  1:1024307‑M2/1‑95 (MQ=255)

     cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgtt                                                                                               >  2:3394151‑M2/1‑95 (MQ=255)

      ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGttt                                                                                              <  1:903525/100‑1 (MQ=255)

      ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGttt                                                                                              >  2:1010863/1‑100 (MQ=255)

           ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa                                                                                         <  1:449919/100‑1 (MQ=255)

           ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa                                                                                         >  1:3332444/1‑100 (MQ=255)

           ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa                                                                                         <  1:3153475/100‑1 (MQ=255)

           ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa                                                                                         >  1:282844/1‑100 (MQ=255)

            gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAg                                                                                        >  2:2068736/1‑100 (MQ=255)

            gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAg                                                                                        <  1:409855/100‑1 (MQ=255)

             aCGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGc                                                                                       <  2:267821/100‑1 (MQ=255)

              cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt                                                                                      >  2:3941258/1‑100 (MQ=255)

              cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt                                                                                      <  2:3737999/100‑1 (MQ=255)

              cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt                                                                                      <  1:3864441/100‑1 (MQ=255)

               gTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTa                                                                                     <  2:2946419/100‑1 (MQ=255)

               cttGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTa                                                                                     <  1:2164503/99‑1 (MQ=255)

                 tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTagg                                                                                   >  2:2164492/1‑98 (MQ=255)

                 tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTaca                                                                                   <  2:1285824/100‑1 (MQ=255)

                  gATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaa                                                                                  >  1:1288153/1‑100 (MQ=255)

                   aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCCTGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac                                                                                 >  2:1747239/1‑100 (MQ=255)

                   aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac                                                                                 >  1:2193842/1‑100 (MQ=255)

                       acacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCg                                                                             <  1:3526576/100‑1 (MQ=255)

                        cacCGCAACGTTGCTGGCGGAGCTGGCGCTTCCCTATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGc                                                                            <  1:2735344/100‑1 (MQ=255)

                         acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGTTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCCCAGGCGTTTAATCAGCTACAACATCGcc                                                                           <  1:2920714/100‑1 (MQ=255)

                         acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGcc                                                                           <  1:3129882/100‑1 (MQ=255)

                           cGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCg                                                                         <  1:1906408/100‑1 (MQ=255)

                           cGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCg                                                                         >  1:2071274/1‑100 (MQ=255)

                               aCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTc                                                                     <  1:1516609/100‑1 (MQ=255)

                                  ttGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTcgcg                                                                  <  2:4000900/100‑1 (MQ=255)

                                  ttGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTcgcg                                                                  <  2:2857625/100‑1 (MQ=255)

                                   tGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCgcgc                                                                 >  2:2555705/1‑100 (MQ=255)

                                   tGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCgcgc                                                                 <  2:4052172/100‑1 (MQ=255)

                                    gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc                                                                >  2:3641443/1‑100 (MQ=255)

                                     cTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCa                                                               >  1:1352955/1‑100 (MQ=255)

                                     cTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCa                                                               >  1:3235892/1‑100 (MQ=255)

                                      tGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCaa                                                              >  2:1734523/1‑100 (MQ=255)

                                         cGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAatat                                                           >  2:1932784/1‑100 (MQ=255)

                                          gatattGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATc                                                          <  1:1387452/95‑1 (MQ=255)

                                             gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGt                                                       >  2:4019762/1‑100 (MQ=255)

                                             gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGt                                                       >  2:916525/1‑100 (MQ=255)

                                             gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGt                                                       >  1:2327778/1‑100 (MQ=255)

                                              cTGGCGCTTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTg                                                      <  1:4128491/100‑1 (MQ=255)

                                               tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg                                                     >  1:28477/1‑100 (MQ=255)

                                               tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg                                                     <  2:2014851/100‑1 (MQ=255)

                                               tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg                                                     >  1:28528/1‑100 (MQ=255)

                                                 gcgcGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCa                                                   <  1:407884/100‑1 (MQ=255)

                                                  cgcgTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCAt                                                  >  1:1642039/1‑100 (MQ=255)

                                                     gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTaa                                               <  1:1542900/100‑1 (MQ=255)

                                                     gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATCaa                                               >  2:2512724/1‑100 (MQ=255)

                                                     gTCCCGATTTGCGCTCTGGGGACCGAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTa                                                <  2:3462708/99‑1 (MQ=255)

                                                      tCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc                                              >  1:494506/1‑100 (MQ=255)

                                                      tCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc                                              <  1:784739/100‑1 (MQ=255)

                                                      tCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc                                              >  1:1894631/1‑100 (MQ=255)

                                                       cccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACa                                             <  1:2399188/100‑1 (MQ=255)

                                                              tGCTCTCTGGGGACCCAACGCAGGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg                                      <  2:876943/100‑1 (MQ=255)

                                                               gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCTCGCCAATATCGGTGGCATTAACAAAGTgcgc                                     <  1:2040286/100‑1 (MQ=255)

                                                               gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcgc                                     <  1:3941288/100‑1 (MQ=255)

                                                                ctctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTCCAACATCGCCCGTTTCGCGCCAATCTCGGTGGCATCAACAAAGTGCGCa                                    >  2:1360717/1‑100 (MQ=255)

                                                                ctctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGTTGGCATTAACAAAGTGCGCa                                    >  2:13945/1‑100 (MQ=255)

                                                                 tctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa                                   >  1:1845864/1‑100 (MQ=255)

                                                                 tctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa                                   >  1:1795397/1‑100 (MQ=255)

                                                                  ctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa                                   <  1:1734533/99‑1 (MQ=255)

                                                                  ctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAAt                                  >  2:261425/1‑100 (MQ=255)

                                                                   tatGGGGACCCAACGCGTGGGCAACTGGCGCAGGCGTTTAATCAGTCACAACATCGCCCTTTTCGCGCCAATAGCGGTGGCATTAACAAAGTGCGCAAt                                  <  2:4123617/97‑1 (MQ=255)

                                                                       gggACCCAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtc                             <  1:882749‑M2/100‑72 (MQ=255)

                                                                        ggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAatat                            <  1:3795312/100‑1 (MQ=255)

                                                                        ggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAatat                            <  1:3795371/100‑1 (MQ=255)

                                                                          aCCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCa                          <  1:1140159/100‑1 (MQ=255)

                                                                           cccAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccct                         <  2:2340818‑M2/100‑76 (MQ=255)

                                                                           cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAt                         >  2:2799515/1‑100 (MQ=255)

                                                                            ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg                        <  2:494503/100‑1 (MQ=255)

                                                                            ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg                        <  2:3331512/100‑1 (MQ=255)

                                                                            ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg                        <  1:2650882/100‑1 (MQ=255)

                                                                            ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg                        >  2:3010841/1‑100 (MQ=255)

                                                                             cAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGt                       >  2:3480934/1‑100 (MQ=255)

                                                                             cAACGCATGGGCAACTGGCGCAGGCGTATAATCAGCTACAACATAGCCCGTTTCGCGCCAATATCGGCTGCACTAACAAACGGCGCAAGCAATAGCATGt                       >  2:1848576/1‑100 (MQ=255)

                                                                              aaaGCATGGGCAACTGGCGCAGgcgttaggtccccagagagcaaatcgggacgcgccagctccgccagcaacgtttcggtgtcgatcaacgtcccctccg                      <  2:2657200‑M2/100‑79 (MQ=255)

                                                                              aaCGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccg                      <  2:594410‑M2/100‑79 (MQ=255)

                                                                              aaCGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccg                      <  1:369122‑M2/100‑79 (MQ=255)

                                                                              aaCGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTc                      <  2:1642030/100‑1 (MQ=255)

                                                                                cGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta                    <  2:1572738/100‑1 (MQ=255)

                                                                                 gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCtat                   <  1:799406/100‑1 (MQ=255)

                                                                                  cATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCtata                  <  1:3001008/100‑1 (MQ=255)

                                                                                  cATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATCAACAAAGTGCGCAATGAATATCATGTCtata                  <  1:2512739/100‑1 (MQ=255)

                                                                                    tGGGCAACTGGCGCAGTCGTTTAATCAGCTACAACAGCGCCCGTTTCTCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATg                <  2:1501073/100‑1 (MQ=255)

                                                                                     gggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGa               >  2:4089709/1‑100 (MQ=255)

                                                                                      ggCAACTGTCGCAGGCGTTTAATCAGCTACAACATCGGCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGAc              <  2:3095892/100‑1 (MQ=255)

                                                                                      ggCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGAc              >  1:1419762/1‑100 (MQ=255)

                                                                                       gCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGAcc             <  2:3566624/100‑1 (MQ=255)

                                                                                       gCAACTGGCGCAGGCGGCTAATCAGCTACAACATCGCCCGTTTCGTTCCAATACCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGAcc             <  2:2289347/100‑1 (MQ=255)

                                                                                          aCTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAt          >  1:2302285/1‑100 (MQ=255)

                                                                                            tGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATgc        <  1:3558670/100‑1 (MQ=255)

                                                                                               cgcAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCa     >  1:641433/1‑100 (MQ=255)

                                                                                                  aGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAggg  <  1:753187/100‑1 (MQ=255)

                                                                                                  aGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAggg  >  2:2074130/1‑100 (MQ=255)

AGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGG  >  NC_000913/4636803‑4637000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.