| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 580891 = | 66 (0.440) | 11 (0.080) | 5/166 | NT | 15.8% | coding (58/546 nt) | nohD | DLP12 prophage; DNA packaging protein |
| ? | NC_000913 | 580924 = | 56 (0.400) | coding (91/546 nt) | nohD | DLP12 prophage; DNA packaging protein | |||||
Only 100 of 101 total aligned reads displayed.
GAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCC > NC_000913/580825‑581023 | ttcggcataccattttatgacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGc > 1:2624716‑M1/67‑100 (MQ=255) tcggcataccattttatgacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg > 2:152005‑M1/66‑100 (MQ=255) tcggcataccattttatgacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg > 1:1514498‑M1/66‑100 (MQ=255) tcggcataccatcttataacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg > 1:2208780‑M1/66‑100 (MQ=255) tcggcataccatcttataacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg > 1:2721431‑M1/66‑100 (MQ=255) aaTGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg < 1:1352622/100‑1 (MQ=35) aaTGTGCAATGGAAGTCAACAAAAAGCAGCTGGCAGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCg < 1:1650738/100‑1 (MQ=25) tgtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAg < 2:2112818/100‑1 (MQ=33) ggcataccattttatgacggcggcagagtcataacgcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCTCGTTCTGCGAg > 2:2189181‑M1/64‑100 (MQ=255) ggcataccatcttataacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAg > 1:446871‑M1/64‑100 (MQ=255) gtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAgg > 2:2880016/1‑100 (MQ=32) gtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAgg < 1:2217392/100‑1 (MQ=32) gtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCACGAACAGGGAATGCCCGTTCTGCGa > 2:3474752/1‑98 (MQ=17) gcataccattttatgacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAgg > 2:2388708‑M1/63‑100 (MQ=255) gcataccatcttataacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAgg > 1:350197‑M1/63‑100 (MQ=255) tgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAgg > 2:4003199/1‑99 (MQ=31) tgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGc < 1:2887897/100‑1 (MQ=31) cataccattttatgacggcggcagagtcataaagcacctcattacccttgccaccgcctcgCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGc > 1:1382785‑M1/62‑100 (MQ=255) tggcagtttCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGAc < 2:3742239/94‑1 (MQ=0) tGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTc > 2:1805251/1‑100 (MQ=11) gCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTGCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCa < 1:673319/100‑1 (MQ=14) gCGAGTATCCGTACCATTCAGAACGGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCa < 2:1787128/100‑1 (MQ=14) cGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCAt > 2:1402498/1‑100 (MQ=32) cGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCCGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCAt > 2:3455588/1‑100 (MQ=17) gAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATa < 1:731951/100‑1 (MQ=32) aTCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATaaaa < 2:3175730/99‑1 (MQ=35) tCCGTACCATTCAGAACTGGCAGGAACAGGGATTGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATg < 2:523876/100‑1 (MQ=38) tCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATg > 2:246374/1‑100 (MQ=35) ccGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATgg < 1:826077/100‑1 (MQ=38) ccGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATgg < 2:107819/100‑1 (MQ=38) cGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGt < 2:111882/100‑1 (MQ=38) cGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGt > 2:2939295/1‑100 (MQ=38) cGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGt > 2:64213/1‑100 (MQ=38) cGTACCATTCAGAACTGGCAAGAACAGGAAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTACTTTATGACTCTGCCGACGTCATAAAAt > 2:1356969/1‑97 (MQ=11) gTACCATTCAGAACTGGCAGGAACAGGGAATTCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTa < 1:1218793/100‑1 (MQ=38) tACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTAt > 1:1277093/1‑100 (MQ=38) tACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTAt < 2:3189097/100‑1 (MQ=38) gcctcgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATg > 1:1382785‑M2/40‑100 (MQ=255) aCCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATg < 1:3248967/100‑1 (MQ=38) cctcgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGc > 1:350197‑M2/39‑100 (MQ=255) cctcgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGc > 2:2388708‑M2/39‑100 (MQ=255) ctcgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGcc > 1:446871‑M2/38‑100 (MQ=255) ctcgcagaacgagcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCGTTATGACTCTGCCGCCGTCATAAAATGGTATGcc > 2:2189181‑M2/38‑100 (MQ=255) cATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGcc > 1:400893/1‑100 (MQ=38) cATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGcc < 2:298962/100‑1 (MQ=38) cATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGcc < 2:3471167/100‑1 (MQ=38) cATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGc > 1:1863653/1‑99 (MQ=38) cttCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGACGGTGGCAAGGGTAAGGAGGTGCTTTATGACTCTGCCGCCGTCAGAAAATgg > 2:1006673/2‑93 (MQ=255) ttCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGa > 2:3575201/1‑100 (MQ=38) ttCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGa < 2:2889806/100‑1 (MQ=38) ttCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGa > 1:3673650/1‑100 (MQ=38) cgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGCCGa > 1:2208780‑M2/36‑100 (MQ=255) cgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGCCGa > 1:2721431‑M2/36‑100 (MQ=255) cgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGa > 1:1514498‑M2/36‑100 (MQ=255) cgcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGa > 2:152005‑M2/36‑100 (MQ=255) gcagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa > 1:2624716‑M2/35‑100 (MQ=255) cagaacgggcattccctgttcctgccagttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGCCGaaa > 1:2157940‑M2/34‑100 (MQ=255) CAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaaa < 1:1817760‑M1/100‑1 (MQ=255) CAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGGAAGGAGGTGCTTTATGACTCGGCCGCCGTCATAAAATGGAAGGCCGaaa < 2:843338‑M1/100‑1 (MQ=255) AGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAg < 1:1172235‑M1/100‑1 (MQ=255) AGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAg < 1:1617218‑M1/100‑1 (MQ=255) GAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAgg > 2:1799164‑M1/1‑100 (MQ=255) GAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAgg > 1:2459010‑M1/1‑100 (MQ=255) ACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGa < 2:1967045‑M1/100‑1 (MQ=255) CTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATACCGAAAGGGAt < 1:2864292‑M1/100‑1 (MQ=255) ggCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTGATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc > 2:3746299/1‑100 (MQ=38) ggCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc > 2:3140921/1‑100 (MQ=38) ggCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc > 1:951605/1‑100 (MQ=38) ggCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc > 2:1620044/1‑100 (MQ=38) ggCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc < 2:1239678/100‑1 (MQ=38) cAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTg > 1:2441643/1‑100 (MQ=38) cAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTg > 1:3094100/1‑100 (MQ=38) aGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGa > 2:706444/1‑100 (MQ=35) ggAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGaa > 1:2264373/1‑100 (MQ=38) ggAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGaa < 1:1389241/100‑1 (MQ=38) ggAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGaa > 2:2556545/1‑100 (MQ=38) ggAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGCGTAATGAGGTGCTTTATCACTCTGCCGCCGTCATACAATGGTATGCCCAAACGgctgct > 2:3592444/1‑97 (MQ=11) gAACAGGGCATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGCTGCTGaaa > 2:1239611/1‑100 (MQ=255) gAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGaaa > 1:2954376/1‑100 (MQ=38) gAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGaa > 2:237113/1‑99 (MQ=38) aaCAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAAt < 1:1293974/100‑1 (MQ=35) aCAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGTGATGCTGAAAtt < 2:485483/100‑1 (MQ=38) cAGGGAGTGCCCGTCATGCGACGCGGTGGCAAGGGTAATGAGGTGCTTTAGGGCTCTGCCGCCGTCATAAAATGGTATGACGAAAGGGATGCTGAAATTg < 2:1751643/100‑1 (MQ=11) cAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTg > 2:3001440/1‑100 (MQ=38) gggAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTgag < 2:3997790/100‑1 (MQ=35) gggAAGGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTgag < 2:2796019/100‑1 (MQ=25) ggAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTgaga > 2:1505311/1‑100 (MQ=38) gAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGaa < 1:996036/100‑1 (MQ=38) gAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGaa < 1:158582/100‑1 (MQ=38) aaTGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAAc < 2:3636531/100‑1 (MQ=38) aTGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTgag < 2:3106205/96‑1 (MQ=38) tGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGa > 1:3792714/1‑100 (MQ=38) ccGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTGTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGa < 2:1286182/97‑1 (MQ=25) ccGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGaaaa < 1:2457832/100‑1 (MQ=38) ccGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGaaaa < 2:3264133/100‑1 (MQ=38) gttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATACAATGGTATGCCGACAGGGATGCTGACATTGAGCACGAAAAGc > 2:3650044‑M2/7‑100 (MQ=255) ttctgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCt < 2:3847658‑M2/95‑1 (MQ=255) tgCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTgcg < 1:1524339‑M2/98‑1 (MQ=255) gCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTgcgc < 1:1883835‑M2/99‑1 (MQ=255) cGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGcc > 1:2292353/1‑100 (MQ=38) | GAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCC > NC_000913/580825‑581023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |