New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)141 (0.980) 90/170 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 174 total aligned reads displayed.

TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913/1300599‑1300797
                                                                                                   |                                                                                                   
ccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaa                                                                                                     >  1:2749697‑M2/100‑100 (MQ=255)
 catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaat                                                                                                    >  1:2129587‑M2/99‑100 (MQ=255)
 catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaat                                                                                                    <  1:2659031‑M2/2‑1 (MQ=255)
     atgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                                >  1:3753440‑M2/95‑100 (MQ=255)
      tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgtctttggtagaggaaagtgctaaataataa                                                                                               >  2:1233760‑M2/94‑100 (MQ=255)
      cATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAACTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTCAATCGCACATTCCCTAaataaggt                                                                                               >  2:3249541/1‑97 (MQ=1)
       gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                              <  2:1722329‑M2/8‑1 (MQ=255)
       gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                              <  2:618915‑M2/8‑1 (MQ=255)
          attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCaa                                                                                           >  1:1620169‑M2/90‑100 (MQ=255)
          attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCaa                                                                                           >  1:2380495‑M2/90‑100 (MQ=255)
           ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                          <  2:2829122‑M2/12‑1 (MQ=255)
           ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                          >  2:2964066‑M2/89‑100 (MQ=255)
           ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                          >  1:92277‑M2/89‑100 (MQ=255)
           ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                          >  1:2675769‑M2/89‑100 (MQ=255)
             ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                        >  1:44831‑M2/87‑100 (MQ=255)
               cgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                      >  2:1604632‑M2/85‑100 (MQ=255)
                gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                     >  1:813115‑M2/84‑100 (MQ=255)
                gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                     >  2:4041734‑M2/84‑100 (MQ=255)
                      tcataattctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                               <  2:1925242‑M2/23‑1 (MQ=255)
                       cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              >  1:352990‑M2/77‑100 (MQ=255)
                       cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              >  2:542414‑M2/77‑100 (MQ=255)
                        ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  2:138791‑M2/25‑1 (MQ=255)
                        ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  2:1225948‑M2/25‑1 (MQ=255)
                           atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttagtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                          >  2:400893‑M2/73‑100 (MQ=255)
                             cctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                        <  2:2766973‑M2/30‑1 (MQ=255)
                              ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       >  1:3730168‑M2/70‑100 (MQ=255)
                              ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       >  2:255623‑M2/70‑100 (MQ=255)
                                gtgcttgctgaagaattattgaaattatattattaattccactgactttggtagtggatagttctaaATAATAATCAATTGTTAAATTATTGTGCATTTc                                                                     <  2:808394‑M2/33‑1 (MQ=255)
                                gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTc                                                                     <  2:3273708‑M2/33‑1 (MQ=255)
                                   cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   <  2:3661382‑M2/35‑1 (MQ=255)
                                      gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                               >  2:1930728‑M2/62‑100 (MQ=255)
                                        tgaataataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAAGAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                              <  2:1191422‑M2/40‑1 (MQ=255)
                                        tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                             <  2:2403916‑M2/41‑1 (MQ=255)
                                         gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtttcactacagat                                                            >  1:2537889‑M2/59‑96 (MQ=255)
                                          aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                           <  2:1469374‑M2/43‑1 (MQ=255)
                                            gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         >  1:3134645‑M2/56‑100 (MQ=255)
                                            gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         <  2:2251749‑M2/45‑1 (MQ=255)
                                            gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         <  1:255626‑M2/45‑1 (MQ=255)
                                             aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                        <  2:265106‑M2/46‑1 (MQ=255)
                                              ataattgaaatgatattattaattccactgcctttgttagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                       >  2:157393‑M2/54‑100 (MQ=255)
                                              ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                       >  2:2547412‑M2/54‑100 (MQ=255)
                                                aattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                     >  2:889488‑M2/52‑100 (MQ=255)
                                                   tgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                  <  2:3353895‑M2/52‑1 (MQ=255)
                                                   tgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                  >  1:3685881‑M2/49‑100 (MQ=255)
                                                       atgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                              <  1:1497047‑M2/56‑1 (MQ=255)
                                                       atgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaa                                               >  2:742479‑M2/45‑99 (MQ=255)
                                                          atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTTTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                           >  2:3655401‑M2/42‑100 (MQ=255)
                                                          atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                           <  2:2681298‑M2/59‑1 (MQ=255)
                                                           tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                          <  2:4010080‑M2/60‑1 (MQ=255)
                                                             ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                        >  1:874743‑M2/39‑100 (MQ=255)
                                                             ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                        <  1:2216971‑M2/62‑1 (MQ=255)
                                                              tattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                       >  1:1725033‑M2/38‑100 (MQ=255)
                                                                  aattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                   >  1:2922492‑M2/34‑100 (MQ=255)
                                                                  aattccactgactttgttagaggaaagtgctaaATAATAAGCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                      <  2:3886179‑M2/64‑1 (MQ=255)
                                                                   attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGc                                  >  1:2297259‑M2/33‑100 (MQ=255)
                                                                      ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                               >  1:3343352‑M2/30‑100 (MQ=255)
                                                                      ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                               >  1:3199558‑M2/30‑100 (MQ=255)
                                                                      ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                               >  1:2985630‑M2/30‑100 (MQ=255)
                                                                       cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  2:1400541‑M2/29‑100 (MQ=255)
                                                                       cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  1:3932144‑M2/29‑100 (MQ=255)
                                                                       cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  1:3584539‑M2/29‑100 (MQ=255)
                                                                         ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                            <  2:2338148‑M2/74‑1 (MQ=255)
                                                                             ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        <  2:1298040‑M2/78‑1 (MQ=255)
                                                                             ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        >  2:2105850‑M2/23‑100 (MQ=255)
                                                                              tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                       >  2:301‑M2/22‑100 (MQ=255)
                                                                               ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtctc                      >  2:3946288‑M2/21‑100 (MQ=255)
                                                                               ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtctc                      <  1:4157750‑M2/80‑1 (MQ=255)
                                                                               ttggtagaggaaagtgctaaAGAATAAGCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtctc                      <  2:712428‑M2/80‑1 (MQ=255)
                                                                                 ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                    >  2:445304‑M2/19‑100 (MQ=255)
                                                                                  gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                   >  1:680660‑M2/18‑100 (MQ=255)
                                                                                  gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                   >  1:3414085‑M2/18‑100 (MQ=255)
                                                                                    agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                 <  2:1725144‑M2/85‑1 (MQ=255)
                                                                                     gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg                >  2:2849137‑M2/15‑100 (MQ=255)
                                                                                     gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg                <  1:1014384‑M2/86‑1 (MQ=255)
                                                                                       ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGGGCTGGAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              <  1:1173700‑M2/88‑1 (MQ=255)
                                                                                       ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              <  2:92275‑M2/88‑1 (MQ=255)
                                                                                       ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              <  1:248781‑M2/88‑1 (MQ=255)
                                                                                       ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              <  1:3300587‑M2/88‑1 (MQ=255)
                                                                                         aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            >  1:19074‑M2/11‑100 (MQ=255)
                                                                                         aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  1:3008523‑M2/90‑1 (MQ=255)
                                                                                          aagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattga           <  2:2765848‑M2/91‑1 (MQ=255)
                                                                                            gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat         <  1:1444921‑M2/93‑1 (MQ=255)
                                                                                            gtgctaaATAATAATCAATTGTTAAATTAGTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat         <  2:3524028‑M2/93‑1 (MQ=255)
                                                                                             tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt        >  1:1711405‑M2/7‑100 (MQ=255)
                                                                                             tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt        >  1:1751504‑M2/7‑100 (MQ=255)
                                                                                              gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg       >  2:823227‑M2/6‑100 (MQ=255)
                                                                                              gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCACTATTTGattgaattg       >  2:2437560‑M2/6‑100 (MQ=255)
                                                                                               ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  1:113716‑M2/5‑100 (MQ=255)
                                                                                               ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  2:2488580‑M2/5‑100 (MQ=255)
                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTTACTACTGGAAATGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgatttga      >  2:2880845‑M2/4‑99 (MQ=255)
                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa     <  1:3212859‑M2/97‑1 (MQ=255)
                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa     >  1:1467880‑M2/4‑100 (MQ=255)
                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa     <  2:1956851‑M2/97‑1 (MQ=255)
                                                                                                 aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa    <  1:518999‑M2/98‑1 (MQ=255)
                                                                                                 aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa    <  2:1743992‑M2/98‑1 (MQ=255)
                                                                                                 aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa    <  2:1751494‑M2/98‑1 (MQ=255)
                                                                                                 aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa    <  2:185323‑M2/98‑1 (MQ=255)
                                                                                                  aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg   <  1:2109022‑M2/99‑1 (MQ=255)
                                                                                                   ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAGGa  >  2:1048271/1‑100 (MQ=255)
                                                                                                   ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGa  <  1:865442/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913/1300599‑1300797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.