BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	2,210,811	C→T	100%	pseudogene (1712/2001 nt)	yehQ →	pseudogene

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,210,811	0	C	T	100.0%	385.9 / ‑6.7	116	pseudogene (1712/2001 nt)	yehQ	pseudogene
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (64/50); minor base G (0/1); total (65/51)

Only 100 of 116 total aligned reads displayed.

CAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCT  >  NC_000913/2210716‑2210906

cAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTa                                                                                             >  2:3690024/1‑100 (MQ=255)

  gTTTTGTTGAAGGGCAATTGACACTTGAATCTCGGGTTATGATGACAAAAAGCCGTGCCTGGGTGCTGGACGCAGAAACTACGCCTGTGGCACGGc                                                                                               <  2:2758144/96‑1 (MQ=255)

  gTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTAcc                                                                                           <  1:713793/100‑1 (MQ=255)

  gTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTAcc                                                                                           >  1:1931262/1‑100 (MQ=255)

      tgttgAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCt                                                                                       <  1:1099968/100‑1 (MQ=255)

        ttgAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGc                                                                                     >  2:3384482/1‑100 (MQ=255)

         tgAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGCCGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGcc                                                                                    <  2:2219425/100‑1 (MQ=255)

          gAAGGGCAATTGACACTGGAACCACGGGTGCTGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCa                                                                                   >  2:3370625/1‑100 (MQ=255)

          gAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCa                                                                                   >  1:1070727/1‑100 (MQ=255)

             gggCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCg                                                                                >  1:2848558/1‑100 (MQ=255)

             gggCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCg                                                                                >  1:2228909/1‑100 (MQ=255)

             gggCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACACCTGTGGCACTGCTACCTGCTGCCa                                                                                   >  2:275471/1‑97 (MQ=255)

               gCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGtt                                                                              >  2:2452617/1‑100 (MQ=255)

               gCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGtt                                                                              >  1:448240/1‑100 (MQ=255)

               gCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGtt                                                                              >  1:667797/1‑100 (MQ=255)

               gCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGtt                                                                              >  2:3997485/1‑100 (MQ=255)

                cAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGttt                                                                             >  2:1654249/1‑100 (MQ=255)

                  aTTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTg                                                                           >  1:650816/1‑100 (MQ=255)

                  aTTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTg                                                                           <  1:3908065/100‑1 (MQ=255)

                   ttGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGc                                                                          >  2:4013252/1‑100 (MQ=255)

                   ttGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGc                                                                          <  2:551370/100‑1 (MQ=255)

                    tGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTTGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGcc                                                                         <  2:3499329/100‑1 (MQ=255)

                      acacTGGAACCACCGGTCATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCCGAAACTACGCCTGTGGCACAGCTACTTTCTGCCAGCGTTTTGcc                                                                         >  2:2949855/1‑98 (MQ=255)

                       cacTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgt                                                                      >  1:893744/1‑100 (MQ=255)

                       cacTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgt                                                                      <  1:589836/100‑1 (MQ=255)

                       cacTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgt                                                                      >  1:3149436/1‑100 (MQ=255)

                        acTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgtg                                                                     >  2:867728/1‑100 (MQ=255)

                        acTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgtg                                                                     >  1:3394005/1‑100 (MQ=255)

                        acTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCtgtg                                                                     >  2:267658/1‑100 (MQ=255)

                          tGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGcc                                                                   <  1:1742792/100‑1 (MQ=255)

                           ggAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCg                                                                  >  1:1632318/1‑100 (MQ=255)

                           ggAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCg                                                                  >  1:3786712/1‑100 (MQ=255)

                            gAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGc                                                                    >  2:3450848/1‑97 (MQ=255)

                            gAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGt                                                                 >  1:1496107/1‑100 (MQ=255)

                              aCCACGGGTGATGATGACAAAACCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCt                                                               <  2:2454239/100‑1 (MQ=255)

                                cACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTAc                                                             >  1:1082735/1‑100 (MQ=255)

                                cACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTAc                                                             >  2:1050223/1‑100 (MQ=255)

                                cACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTAc                                                             <  1:4133333/100‑1 (MQ=255)

                                 aCGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACt                                                            >  1:3235303/1‑100 (MQ=255)

                                  cGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTg                                                           <  1:453459/100‑1 (MQ=255)

                                   gggTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGc                                                          >  1:2365870/1‑100 (MQ=255)

                                    ggTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCt                                                         <  2:248275/100‑1 (MQ=255)

                                    ggTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCt                                                         >  2:1327467/1‑100 (MQ=255)

                                    ggTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCt                                                         >  2:1052760/1‑100 (MQ=255)

                                     gTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCtc                                                        <  2:2936575/100‑1 (MQ=255)

                                       gatgatgaCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCtcat                                                      <  1:1047268/100‑1 (MQ=255)

                                         tgatgaCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCGTATGACAGCGTTTTGCCTGTGCCGTCTACTGCtcatca                                                    >  1:1536819/1‑100 (MQ=255)

                                           agcaCAAAACCCCGTTCCTCGGCGCTGGACGCAGAAACTACGCCTGTGGCCCTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTAc                                                             <  2:2577856/86‑1 (MQ=255)

                                             gaCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTg                                                <  1:3462748/100‑1 (MQ=255)

                                              aCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTTCCTGTGCCGTCTACTTCTCATCAGTTGc                                               >  2:612354/1‑100 (MQ=255)

                                              aCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGc                                               <  1:656967/100‑1 (MQ=255)

                                              aCAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGc                                               >  1:555781/1‑100 (MQ=255)

                                               cAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCt                                              <  2:1484892/100‑1 (MQ=255)

                                                aaaaaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTg                                             >  2:2118081/1‑100 (MQ=255)

                                                aaaaaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTg                                             <  1:2506247/100‑1 (MQ=255)

                                                aaaaaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTg                                             >  2:649042/1‑100 (MQ=255)

                                                 aaaaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGa                                            >  1:3805299/1‑100 (MQ=255)

                                                 aaaaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGa                                            <  1:1547975/100‑1 (MQ=255)

                                                   aagccGTGGCTGGGCGCTGGACGCAGAAACTTCGACTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATa                                          <  2:2197999/97‑1 (MQ=255)

                                                   aaCCCGTGCCTGGGCGCTGGACGCAGAAACTACGTCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATa                                          <  2:2197998/100‑1 (MQ=255)

                                                       cGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCt                                      >  1:1520095/1‑100 (MQ=255)

                                                        gTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTg                                     >  1:2548772/1‑100 (MQ=255)

                                                         tggcTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATAtgctgc                                    >  1:3742397/4‑100 (MQ=255)

                                                          gCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCGACCTTCTGCCAGCGTTTTGCGTGTGCCGTCTACTGCTCATCCGTTGCTGATACGCTTcc                                   >  2:4063368/1‑100 (MQ=255)

                                                            cTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAg                                 <  1:2676391/100‑1 (MQ=255)

                                                             tGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAgg                                <  1:3521211/100‑1 (MQ=255)

                                                             tGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAgg                                >  1:1825566/1‑100 (MQ=255)

                                                             tGGGCGCTGGACGCAGAAACTACGCCTGTGGCACTGCAACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAgg                                <  1:651307/100‑1 (MQ=255)

                                                              gggCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTTTCTTTTTTTTTTACTGCTCATCAGTTGCTGATACGCTGCCAGGc                               >  2:1040015/1‑100 (MQ=255)

                                                               ggCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCg                              >  1:1265369/1‑100 (MQ=255)

                                                               ggCGCTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCg                              >  1:2975027/1‑100 (MQ=255)

                                                                  gcTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTa                           <  1:1644958/100‑1 (MQ=255)

                                                                   cTGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTAc                          <  1:12780/100‑1 (MQ=255)

                                                                    tgtgcGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACt                         <  2:3909265/96‑1 (MQ=255)

                                                                    tGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACt                         <  2:3748736/100‑1 (MQ=255)

                                                                    tGGACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACt                         >  2:637402/1‑100 (MQ=255)

                                                                      gACGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACttn                       <  2:1685166/100‑2 (MQ=255)

                                                                       aCGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTAt                      <  1:3509581/100‑1 (MQ=255)

                                                                       aCGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTAt                      <  2:1082732/100‑1 (MQ=255)

                                                                        cGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTAtt                     >  1:50142/1‑100 (MQ=255)

                                                                        cGCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTAtt                     >  2:1528965/1‑100 (MQ=255)

                                                                         gCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTc                    <  1:2084842/100‑1 (MQ=255)

                                                                         gCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTc                    >  2:363125/1‑100 (MQ=255)

                                                                         gCAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTc                    <  2:750084/100‑1 (MQ=255)

                                                                          cAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCa                   >  2:1274879/1‑100 (MQ=255)

                                                                          cAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCa                   <  1:1292146/100‑1 (MQ=255)

                                                                          cAGAAACTACGCCTGTGGCACTGCTACCTTCTGCCACCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCa                   >  1:2936260/1‑100 (MQ=255)

                                                                           aGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCaa                  >  2:3249220/1‑100 (MQ=255)

                                                                           aGAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCaa                  >  2:77996/1‑100 (MQ=255)

                                                                            gAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAAc                 <  1:267661/100‑1 (MQ=255)

                                                                            gAAACTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAAc                 <  2:3570162/100‑1 (MQ=255)

                                                                             aaaCTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACt                <  2:1546014/100‑1 (MQ=255)

                                                                             aaaCTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACt                >  2:2608741/1‑100 (MQ=255)

                                                                              aaCTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTg               >  2:3832069/1‑100 (MQ=255)

                                                                               aCTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGc              >  2:1836696/1‑100 (MQ=255)

                                                                                cTACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCt             >  1:4006420/1‑100 (MQ=255)

                                                                                 tACGCCTGTGGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTc            <  1:3997515/100‑1 (MQ=255)

                                                                                       tgtgGCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAAc      <  1:701761/100‑1 (MQ=255)

                                                                                          ggCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACgg    <  2:206507/99‑1 (MQ=255)

                                                                                           gCACTGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCt  <  2:1661503/100‑1 (MQ=255)

CAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCT  >  NC_000913/2210716‑2210906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`