| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,269,044 | T→C | 74.1% | F64S (TTC→TCC) | lpxT → | lipid A 1‑diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1‑phosphate phosphotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,269,044 | 0 | T | C | 74.1% | 217.6 / 79.8 | 135 | F64S (TTC→TCC) | lpxT | lipid A 1‑diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1‑phosphate phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base T (20/15); new base C (49/50); total (70/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.43e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCT > NC_000913/2268948‑2269140 | tGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTc > 2:1590260/1‑98 (MQ=255) ccGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACg > 1:1058039/1‑100 (MQ=255) ccGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACg > 1:771706/1‑100 (MQ=255) ttGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGGCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGCCCAACACTCGCGCCTCCGACGgttg < 2:823526/100‑1 (MQ=255) aTGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTc < 1:1363172/100‑1 (MQ=255) tGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCCACGGTTGTTCa > 2:526255/1‑100 (MQ=255) gCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCAc > 2:2071145/1‑100 (MQ=255) gATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCActgc < 1:211130/100‑1 (MQ=255) atTTGTTATTTCTTTAATCAGAGACTGGTTGAAAGTAAGGCCTTTTTGTGGCTGGTTACATTGACCAACAATCGCGCCTCCGACGGTTGTTTACTGCTgg < 2:4105856/100‑1 (MQ=255) ttttttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGc < 1:2108154/100‑1 (MQ=255) ttttttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGc < 2:3908945/100‑1 (MQ=255) tttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGAt < 1:3051123/100‑1 (MQ=255) tttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGAt < 1:3719228/100‑1 (MQ=255) tttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGAt < 2:2321793/100‑1 (MQ=255) ttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATg < 2:673906/100‑1 (MQ=255) ttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATg < 2:3617926/100‑1 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATgg < 1:463165/100‑1 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATgg < 1:3442205/100‑1 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATgg > 1:572325/1‑100 (MQ=255) aTTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATggg < 1:4043733/100‑1 (MQ=255) aTTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATggg < 1:3464317/100‑1 (MQ=255) aTTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACAAACAATCGCGCCTCCGACGGTTGTTAACGGCTGGCGATggg > 2:3435955/1‑100 (MQ=255) tttCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGt > 1:1008527/1‑100 (MQ=255) tttCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTGTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATggg < 2:2776695/99‑1 (MQ=255) tCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTAt > 1:1264231/1‑100 (MQ=255) cTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATg > 1:1928371/1‑100 (MQ=255) ttAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGtt < 1:3756501/100‑1 (MQ=255) ttAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGtt > 1:1911511/1‑100 (MQ=255) aaTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGa < 1:3374181/100‑1 (MQ=255) aTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGAt > 2:925853/1‑100 (MQ=255) aTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGAt < 2:473773/100‑1 (MQ=255) aTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGAt > 2:23712/1‑100 (MQ=255) aTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGAt > 1:1252596/1‑100 (MQ=255) tCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATg > 1:1794474/1‑100 (MQ=255) tCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATg < 1:1685659/100‑1 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGc < 2:2969153/100‑1 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGc > 2:546854/1‑100 (MQ=255) aGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCt > 1:316554/1‑100 (MQ=255) gAAACTGGTCGAAAGTAAGGCCTTTTTGTTTTTGGTTTCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTg > 2:1827354/1‑100 (MQ=255) cTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGtt > 2:237753/1‑100 (MQ=255) cTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTACATTGACCAACAATCGCGCCTCCGACGGTTGTTCACGGCTGGCGATGGGTATGTTGATGCTGAGtt > 2:2509419/1‑100 (MQ=255) ggTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTc > 2:2293147/1‑100 (MQ=255) ggTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTc > 2:170520/1‑100 (MQ=255) gTCGAAAGTAAGGCCTTTTTGTTTCTTTTTTCATTGAACAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCt > 2:2723066/1‑100 (MQ=255) gAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGc < 2:316551/100‑1 (MQ=255) aaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTg < 2:13928/100‑1 (MQ=255) aGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTga < 2:2992790/100‑1 (MQ=255) aGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGGTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTga < 2:1598874/100‑1 (MQ=255) gTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaa > 2:1645614/1‑100 (MQ=255) gTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaa < 2:1329655/100‑1 (MQ=255) aaGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaag > 1:2351176/1‑100 (MQ=255) aaGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaag < 1:2071156/100‑1 (MQ=255) aGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaaga < 1:2551290/100‑1 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGaaaa > 1:3491993/1‑100 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGaaaa > 1:696754/1‑100 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGaaaa < 1:3827372/100‑1 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGAGTATGTTGATGCTGAGTTTCTGGCTGAAAGaaaa > 2:3747120/1‑100 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTGGTTCACTGCTGGCGATGGGTAAGTTGATGCTGAGTTTCTGGCTgataggaa > 1:2595521/1‑99 (MQ=255) cTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAAc < 2:1291636/100‑1 (MQ=255) tttttGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACg < 2:2756930/100‑1 (MQ=255) ttttGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGc > 1:2222623/1‑100 (MQ=255) ttttGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGc < 2:1623519/100‑1 (MQ=255) ttttGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGc < 1:831603/100‑1 (MQ=255) tgtgGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTGGTTCACTGCTGGCGAGGGGTATGTTTATGCTGAGTTTCGGGCTGAAAGAAAACGcccc > 1:3321976/1‑100 (MQ=255) tgGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTg < 1:4087721/100‑1 (MQ=255) ggCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTgg < 2:3759543/100‑1 (MQ=255) tGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAg < 1:4011108/100‑1 (MQ=255) ggTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAga > 1:2150547/1‑100 (MQ=255) ggTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCa < 2:3442577/98‑1 (MQ=255) gTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgac > 2:3130687/1‑100 (MQ=255) gTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgac > 1:1815155/1‑100 (MQ=255) tttcagtGACCAACAAGCGCGCCTCCTGCGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacg < 1:767062/94‑1 (MQ=255) tGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacga > 1:3762984/1‑100 (MQ=255) gCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacgac > 2:1961304/1‑100 (MQ=255) gCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGATTCTGGCTGAAAGAAAACGCCCCTGGCAgacgac > 1:637110/1‑100 (MQ=255) cATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGacgacg > 1:1077400/1‑100 (MQ=255) ttGACCAACAATCGCGCTTTCGACGGTTGTTCTCTGCTGGCGATGGGAATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGacgacg < 2:1716316/98‑1 (MQ=255) tGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTAt > 1:3881982/1‑100 (MQ=255) tGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTAt < 2:3940524/100‑1 (MQ=255) gACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTAAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATc > 2:2919049/1‑100 (MQ=255) gACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATc > 1:797991/1‑100 (MQ=255) gACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATc < 1:3070770/100‑1 (MQ=255) gACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATc > 2:1958034/1‑100 (MQ=255) aCCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCg < 1:925857/100‑1 (MQ=255) ccAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGCGTTTCTGGCTGACAGAAAACGCCCCTGGCAGACGACGTATctt > 2:4028944/1‑98 (MQ=255) ccAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGt < 2:3565920/100‑1 (MQ=255) ccAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGAGGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGt < 2:532645/100‑1 (MQ=255) aacaaTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGa > 2:3950935/1‑100 (MQ=255) acaaTCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGat < 1:93928/100‑1 (MQ=255) acaaTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGat > 1:1796448/1‑100 (MQ=255) aTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGGAAACGCCACTGGCAGACGACGTATCGTGattat > 2:686565/1‑100 (MQ=255) aTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGattat < 1:1571216/100‑1 (MQ=255) tCGCGCCTCCGACGGTTGTTCACTGCTGGCGGTGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCGTGGCAGACGGCGTATCGTGattat > 2:924464/1‑99 (MQ=255) tCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGattatt < 2:1264224/100‑1 (MQ=255) cgcgCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtg > 1:3363980/1‑100 (MQ=255) cgcgCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtg > 1:7245/1‑100 (MQ=255) gcgcCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtgg < 2:2046668/100‑1 (MQ=255) cgcCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggt < 1:170523/100‑1 (MQ=255) gcCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggtc < 1:75383/100‑1 (MQ=255) ccTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggtct > 1:3113034/1‑100 (MQ=255) | TGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCT > NC_000913/2268948‑2269140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |