Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,281,279 | A→T | 24.9% | A216A (GCA→GCT) | yejH → | putative ATP‑dependent DNA or RNA helicase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,281,279 | 0 | A | T | 24.9% | 197.8 / 71.9 | 111 | A216A (GCA→GCT) | yejH | putative ATP‑dependent DNA or RNA helicase |
Reads supporting (aligned to +/- strand): ref base A (44/37); new base T (18/9); total (64/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.69e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.74e-01 |
Only 100 of 118 total aligned reads displayed.
GAGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGC > NC_000913/2281181‑2281377 | gAGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGcac < 1:2790896/100‑1 (MQ=255) ngCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGcaca > 1:2348564/2‑100 (MQ=255) aGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGcaca > 1:1010004/1‑100 (MQ=255) aGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGcaca > 1:1173759/1‑100 (MQ=255) aGCTGCCGCTGCGTTATATGATTAAACACGGCTACCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGca > 2:765981/1‑98 (MQ=255) tGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCagag < 1:1664768/100‑1 (MQ=255) gCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGt > 2:3178779/1‑100 (MQ=255) gCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGt > 1:2469639/1‑100 (MQ=255) gCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAAc > 1:2561499/1‑100 (MQ=255) gCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAAAGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCTGGCACAGAGTaa > 2:425629/1‑99 (MQ=255) gCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACggg > 2:1716632/1‑100 (MQ=255) gCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACggg < 1:1935845/100‑1 (MQ=255) cGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGTCGCTTGCAGGCACAGAGTAACGGGc < 1:3873004/100‑1 (MQ=255) cGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGc < 1:2011355/100‑1 (MQ=255) ttATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTg < 1:3144935/100‑1 (MQ=255) atatGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGt > 2:1415043/1‑99 (MQ=255) tatGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTc > 1:3181777/1‑100 (MQ=255) atGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCa > 1:2099808/1‑100 (MQ=255) atGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCa > 2:940136/1‑100 (MQ=255) atGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCa < 1:2982095/100‑1 (MQ=255) gATTAAACACGGCTATCTGACGCCGCCAGAACGACTGCATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGc < 2:2811604/100‑1 (MQ=255) aTTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCg > 1:4072472/1‑100 (MQ=255) tAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGaa > 1:1971075/1‑100 (MQ=255) aaaCACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGTCTGTTCAGCGAAg < 1:2804485/100‑1 (MQ=255) aaCACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGc < 1:3397960/100‑1 (MQ=255) acacGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGcc < 2:1153058/100‑1 (MQ=255) acacGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGcc > 2:3163446/1‑100 (MQ=255) cacGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCg > 1:3829682/1‑100 (MQ=255) cacGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCg > 1:3927434/1‑100 (MQ=255) cacGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCg > 2:801680/1‑100 (MQ=255) ggCTATCTGACGCCGCCAGAACGACTGGATATACCAGTAGTGCAATACTATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtc < 1:608465/100‑1 (MQ=255) ggCTATCTGACGCCGCCAGAACGACTGGATAGGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtc > 1:836165/1‑100 (MQ=255) gCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtct < 2:3109857/100‑1 (MQ=255) gCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtcn < 2:2348549/100‑2 (MQ=255) gCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTGCAGCGAAGCCGAtct > 1:4117596/1‑100 (MQ=255) tATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCCATACGATTCCACCCGCTTGCAGGCACAGAGGAACGGGCGGTTCAGCGAAGCCGATCTCa > 2:424331/1‑100 (MQ=255) tATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCa < 2:4072441/100‑1 (MQ=255) tATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCa > 2:835331/1‑100 (MQ=255) tATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCa > 1:437340/1‑100 (MQ=255) tCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAAc < 1:759364/100‑1 (MQ=255) cTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAAcc < 2:3424258/100‑1 (MQ=255) tGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCg > 1:66956/1‑100 (MQ=255) aCGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTg > 2:810531/1‑100 (MQ=255) cgccgcCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGa < 1:409399/100‑1 (MQ=255) cgccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCt > 1:2075485/1‑100 (MQ=255) gccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTg > 1:1206298/1‑100 (MQ=255) gccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTg > 2:3105117/1‑100 (MQ=255) gccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTg > 1:2955083/1‑100 (MQ=255) aGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaa < 2:3830094/100‑1 (MQ=255) aGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaa < 2:450098/99‑1 (MQ=255) gAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaaa < 1:3709/100‑1 (MQ=255) aaCGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaaaa < 1:112035/100‑1 (MQ=255) cGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaac < 1:1869553/100‑1 (MQ=255) cGACTGGATATGCCAGTAGTGCAATACGATCTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaaaca > 2:3590158/1‑97 (MQ=255) gACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaaca < 1:2603251/100‑1 (MQ=255) gACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaaca > 1:3181704/1‑100 (MQ=255) gACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaaca < 2:2994995/100‑1 (MQ=255) aCTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaa > 1:87847/1‑100 (MQ=255) aCTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaa < 2:3203486/100‑1 (MQ=255) tGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaaca > 2:3224594/1‑100 (MQ=255) tGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaaca > 2:3609177/1‑100 (MQ=255) tGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaaca < 1:3586340/100‑1 (MQ=255) ggATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaacaa > 1:1347673/1‑100 (MQ=255) gATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaacaac < 1:801684/100‑1 (MQ=255) atatGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCTAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACg < 2:2217755/100‑1 (MQ=255) atatGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACg < 2:1173754/100‑1 (MQ=255) tatGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAATCCGATCTCAACCGTGAGCTGAAAAAAAAACAACGt > 2:1817338/1‑100 (MQ=255) tatGCCAGTAGTGCAATACGATGTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGACAAAACAACAACGt > 2:2409952/1‑100 (MQ=255) atGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGCCACAGAGCAACGGGCTGTTCAGCGAAGCCGATCTCAACAGTGAGCTGAAAAAACAACAACGTa > 2:1202776/1‑100 (MQ=255) ccAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTa > 2:3115683/1‑100 (MQ=255) agtagtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcc > 1:582506/1‑100 (MQ=255) gtagtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAccc < 1:1622331/100‑1 (MQ=255) tagtGCAATACTATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc > 2:2701651/1‑100 (MQ=255) agtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCg > 1:3106551/1‑100 (MQ=255) gtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGc < 1:397155/100‑1 (MQ=255) gCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcac > 2:1587734/1‑100 (MQ=255) tctACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCAcat < 1:3028394/98‑1 (MQ=255) aTACGATTTCAGCCGCTAGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTCCCCCGCAcatc > 2:384996/1‑100 (MQ=255) tACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCAcatca > 1:3239242/1‑100 (MQ=255) gATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACAtcatca > 2:212502/1‑100 (MQ=255) gATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACAtcatca < 2:307382/100‑1 (MQ=255) aTTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAg > 2:3110656/1‑100 (MQ=255) cAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAg > 2:2067377/1‑100 (MQ=255) aGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGa > 2:3324955/1‑100 (MQ=255) aGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGa > 1:1728756/1‑100 (MQ=255) gtcGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 2:3966829/3‑100 (MQ=255) gCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 2:517835/1‑100 (MQ=255) cGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCGGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTa < 2:1658498/100‑1 (MQ=255) gCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTAt > 1:2333972/1‑100 (MQ=255) cTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATg < 1:1448225/100‑1 (MQ=255) ttGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATgg < 2:2438432/100‑1 (MQ=255) ttGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATg < 2:1558268/99‑1 (MQ=255) tGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGa < 2:2168671/100‑1 (MQ=255) tGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGa > 1:2514509/1‑100 (MQ=255) gCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGAACATCATCAGCCAGATTATGGAg < 1:835335/100‑1 (MQ=255) cAGGCTCAGAGTAACGGACTGTTCAGCGAAGCCAATCTCAACCGTGAGATGAAAAAACAACAACGTATTACCCCAAACATCATAAGCCATATAAAGGa > 2:1803916/1‑98 (MQ=255) cAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAg > 2:1368647/1‑99 (MQ=255) cAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGt > 2:2100215/1‑100 (MQ=255) gCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtg > 1:3966073/1‑100 (MQ=255) cacaGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtgc < 2:3690682/100‑1 (MQ=255) | GAGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGC > NC_000913/2281181‑2281377 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |