| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,134,852 | A→G | 74.8% | intergenic (+29/+20) | yghT → / ← pitB | putative ATP‑binding protein/phosphate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,134,852 | 0 | A | G | 74.8% | 337.2 / 105.9 | 190 | intergenic (+29/+20) | yghT/pitB | putative ATP‑binding protein/phosphate transporter |
| Reads supporting (aligned to +/- strand): ref base A (20/28); new base G (77/64); total (97/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
TGGAACAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCACGC > NC_000913/3134756‑3134946 | ggAACAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCgg > 1:2578739/1‑100 (MQ=255) aCAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCa > 1:1087414/1‑100 (MQ=255) cAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCAt > 1:131394/1‑100 (MQ=255) aGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCAtt < 1:2376738/100‑1 (MQ=255) aGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCAtt > 2:3541328/1‑100 (MQ=255) ggTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCAttt > 2:1172527/1‑100 (MQ=255) tgtTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTc < 1:2056732/100‑1 (MQ=255) gttggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGGAATGCCCGATCGCCAGGGCCGGGCATTTTCa < 2:1144082/100‑1 (MQ=255) gttggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCa > 2:2596791/1‑100 (MQ=255) tggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAgg > 2:2997442/1‑100 (MQ=255) tggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAgg > 2:201928/1‑100 (MQ=255) tggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAgg < 1:1357434/100‑1 (MQ=255) ggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGa > 1:2602842/1‑100 (MQ=255) ggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGa > 2:1371340/1‑100 (MQ=255) ggttgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGCACCGGGCAttttac > 2:2288239/1‑95 (MQ=255) tgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTGTCAGTAGTCAAAAATGGAAATGCCCGAGCGCCAGGACCGGGCGTTTTCAGTAAgg > 2:4175020/1‑100 (MQ=255) tgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGTAAATGACCGATCGCCAGGACCGGGCATTTTCAgg > 2:1482136/1‑96 (MQ=255) tgATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAgg < 1:3635836/100‑1 (MQ=255) gATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGt > 1:89714/1‑100 (MQ=255) aTGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGtt > 2:1454838/1‑100 (MQ=255) gCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTaa > 1:3359300/1‑100 (MQ=255) gCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTaa < 1:2416234/100‑1 (MQ=255) aGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGGTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAAt < 2:3696030/100‑1 (MQ=255) gAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATc < 2:2590258/100‑1 (MQ=255) gAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATc < 1:2975910/100‑1 (MQ=255) gAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATc > 1:3371501/1‑100 (MQ=255) gAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTGTCAGGAAGGTTaaa > 2:3098016/1‑98 (MQ=255) aaaaGCGATTACGGATTTTATGACCGCGCGTGGATATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGAATTTTCAGCAAGGTTAAATCaa > 2:1530702/1‑100 (MQ=255) aaaGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAAc < 1:730343/100‑1 (MQ=255) aaGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACt < 1:2030775/100‑1 (MQ=255) gCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTg < 2:4070661/99‑1 (MQ=255) gCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGc < 1:2581330/100‑1 (MQ=255) aagtACGGATTTTATGACAGAGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGAGCATTTTCAAGAAGGTTAAATCAACTGCaa > 2:1609987/4‑100 (MQ=255) aTTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAAt < 2:1348459/100‑1 (MQ=255) aTTACGGATTTTATGACCGCGCGTGGCTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATCTTCAGGAATGTTAAATCAACTGCAAt > 2:342660/1‑100 (MQ=255) tACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGc < 1:1015640/100‑1 (MQ=255) aCGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGc < 2:3143341/99‑1 (MQ=255) aCGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCt > 1:2637703/1‑100 (MQ=255) cGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGc < 2:1441268/98‑1 (MQ=255) cGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTa > 2:1857368/1‑100 (MQ=255) cGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTa > 1:2349219/1‑100 (MQ=255) cGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTa < 1:3926315/100‑1 (MQ=255) cGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTa < 1:2796996/100‑1 (MQ=255) cGGATTTTATGACCGCGCGTGGTAATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTa > 2:1222006/1‑100 (MQ=255) aTTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATcc < 1:153893/100‑1 (MQ=255) aTTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATcc < 1:370514/100‑1 (MQ=255) aTTTTATGAACGCGCGGGGTTAACACTATTCAAAAATGGAAAGGCCCCATCGCCAGAGCCCGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATcc < 2:2560682/100‑1 (MQ=255) ttttATGACCGCGCGTGGTTCTCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATcc < 2:786786/99‑1 (MQ=255) tttATGACCGCGCGTGGTTATCACTAGTCAAAAATGGGAATGCCTTATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAg < 2:2641634/100‑1 (MQ=255) tttATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAg < 2:3989520/100‑1 (MQ=255) ttATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGt > 1:2623295/1‑100 (MQ=255) ttATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCAGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGt < 1:3837940/100‑1 (MQ=255) tATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCCGTa < 1:345520/100‑1 (MQ=255) tATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTa > 1:1701975/1‑100 (MQ=255) tATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTa < 1:1495956/100‑1 (MQ=255) tGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACa > 1:2217244/1‑100 (MQ=255) tGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACa > 1:2098009/1‑100 (MQ=255) gACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAg < 2:1271343/100‑1 (MQ=255) aCCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAg < 1:2110804/99‑1 (MQ=255) aCCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGc > 2:1233805/1‑100 (MQ=255) cgcgcgTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGccc < 2:3908980/100‑1 (MQ=255) gTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCccacc < 1:3998804/98‑1 (MQ=255) ggTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCagaa < 1:1172532/100‑1 (MQ=255) tCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAgaaagaaa > 2:1066688/1‑100 (MQ=255) cACTAGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGaaaa < 1:3136258/100‑1 (MQ=255) aGTCAAAAATGGAAATTCCTGATCGCCAGGACCTGGCATTTTCAGAAAGGTTAAATCAACTGCAATGCTACCCAGTACAGCCCACCAGAAAGaaaaa < 2:2473016/97‑1 (MQ=255) aGTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTg < 1:4088486/100‑1 (MQ=255) gccAAAAATGGAAATGCCCGAAAGCCAGGGCCGGACATTTTCAGGAAAGATAAATAAACTTCAATCCTATCAAATACAGCGCACAACAAAGATAAATTgc > 2:3898754/3‑100 (MQ=255) gTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgc > 1:3987739/1‑100 (MQ=255) gTCAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgc > 2:3060747/1‑100 (MQ=255) tCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgcc < 2:914586/100‑1 (MQ=255) cAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTCTCCAGTACAGCCCACCAGAAAGAAAAATTgccg > 1:1556233/1‑100 (MQ=255) cAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccg > 1:2037404/1‑100 (MQ=255) cAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccg < 1:615519/100‑1 (MQ=255) cAAAAATGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccg > 2:2854821/1‑100 (MQ=255) aaaaaTGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccgc > 2:2814380/1‑100 (MQ=255) aaaaTGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccgcc < 2:515886/100‑1 (MQ=255) aaaaTGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTgccgcc > 2:284107/1‑100 (MQ=255) acaTGGAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGccgccg < 2:2520993/98‑1 (MQ=255) tGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgta > 2:3946783/1‑100 (MQ=255) ggAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaa > 1:2914565/1‑100 (MQ=255) ggAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaa < 2:2887905/100‑1 (MQ=255) gAAATGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaa > 1:1011695/1‑100 (MQ=255) aaaTGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaag > 1:970537/1‑100 (MQ=255) aaaTGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCACTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaag < 2:2217230/100‑1 (MQ=255) tGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaagtaa > 1:2515275/1‑100 (MQ=255) tGCCCGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaagtaa < 1:3999233/100‑1 (MQ=255) gCCCTATCGCCAGTGCCGGGCATTTTCAGGAAGGTGAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGgtaaactcaa > 2:603296/1‑95 (MQ=255) ccGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATa < 1:1193235/100‑1 (MQ=255) ccGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATa > 1:2852223/1‑100 (MQ=255) ccGATCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATa > 1:464576/1‑100 (MQ=255) aTCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATAccc > 1:3241124/1‑100 (MQ=255) tCGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCa < 2:3757750/100‑1 (MQ=255) cGCCAGGGCCGGGCATTTTCAGGCAGGTTAAATCAACTGCAATGCTATACAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCAc > 2:924790/1‑100 (MQ=255) cGCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCAc > 2:2086235/1‑100 (MQ=255) cGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATAccta < 1:2814396/99‑3 (MQ=255) cGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCAc < 2:663545/100‑1 (MQ=255) gCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCACg < 1:1857378/100‑1 (MQ=255) gCCAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCACg > 1:3103938/1‑100 (MQ=255) ccAGGGCCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCACGc > 1:1874901/1‑100 (MQ=255) | TGGAACAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAGTCAAAAATGGAAATGCCCGATCGCCAGGACCGGGCATTTTCAGGAAGGTTAAATCAACTGCAATGCTATCCAGTACAGCCCACCAGAAAGAAAAATTGCCGCCGGTAAAGTAAATACCCACGC > NC_000913/3134756‑3134946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |