| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,678,937 | T→A | 16.1% | Q84L (CAG→CTG) | yhjH ← | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,678,937 | 0 | T | A | 16.1% | 517.6 / 79.4 | 204 | Q84L (CAG→CTG) | yhjH | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Reads supporting (aligned to +/- strand): ref base T (90/81); new base A (15/18); total (105/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 208 total aligned reads displayed.
TGCTGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGACCACCG > NC_000913/3678838‑3679036 | gCTGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGTGCCAGCAAATCAATCTg > 1:3872173/1‑100 (MQ=255) cTGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGc < 1:2259859/100‑1 (MQ=255) cTGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGc > 2:2652130/1‑100 (MQ=255) tGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGct < 1:3227840/100‑1 (MQ=255) gccGCAGGGCGATGAGCGTAGGGCCATCAATATTGTCCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGct < 2:4172245/97‑1 (MQ=255) gACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctc > 2:2565237/1‑100 (MQ=255) gACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctc > 1:550853/1‑100 (MQ=255) gACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctc > 1:2964995/1‑100 (MQ=255) gACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctc < 2:1981923/100‑1 (MQ=255) gACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctc > 2:1445086/1‑100 (MQ=255) aCGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGctct < 2:1388528/100‑1 (MQ=255) cGCAGGGCGATGAGCGTAGGGCCCTCAATATTTACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCtt > 1:1483511/1‑100 (MQ=255) cAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTc < 1:2886311/100‑1 (MQ=255) aGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTca < 1:3500690/100‑1 (MQ=255) aGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTca < 2:1497093/100‑1 (MQ=255) aGGACGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTca > 1:3483316/1‑100 (MQ=255) gggCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTcac < 1:2123963/100‑1 (MQ=255) gggCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTcac > 2:55101/1‑100 (MQ=255) ggCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTcaca > 1:2913198/1‑100 (MQ=255) gCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACaa < 2:1316086/100‑1 (MQ=255) gATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAAcc < 1:3745142/100‑1 (MQ=255) aTGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCt > 1:773074/1‑100 (MQ=255) gAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTcc < 1:103909/100‑1 (MQ=255) gCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCAt < 1:3920970/100‑1 (MQ=255) gcgggggCATCAATATCGCCCGATGCCAGCAGGCCGTGCACTATAAAGGAGTCGGCAGTCTTCGCCAGCAAATCACTCTGCTCTTCCACAAcc < 2:1662814/90‑1 (MQ=255) gTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATcc < 2:775899/100‑1 (MQ=255) gTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATcc > 1:1081676/1‑100 (MQ=255) aGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGa < 2:2030976/100‑1 (MQ=255) ccATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGc < 2:19240/100‑1 (MQ=255) ccATCAATATTGACCGATGCCAGCAGGCCGTGCTCTAAAAAGAAGTCGGCTTTTCGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATACGATGGc > 2:2233340/1‑100 (MQ=255) cATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCt > 1:2790827/1‑100 (MQ=255) cATCAATATTGACCGATGCCAGCAGCCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGc < 1:2510087/99‑1 (MQ=255) aTCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTg > 2:2461005/1‑100 (MQ=255) tCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGa > 1:3174802/1‑100 (MQ=255) aaTATTGACCGATGCAAGCACGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACg < 1:2296848/100‑1 (MQ=255) atatTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACgg > 1:1498230/1‑100 (MQ=255) atTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTg > 1:2531562/1‑100 (MQ=255) atTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTg < 2:3527216/100‑1 (MQ=255) atTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTg < 2:2606299/100‑1 (MQ=255) ttGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGa < 1:1798912/100‑1 (MQ=255) naCCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGAtt > 2:2815686/2‑100 (MQ=255) gACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGAtt < 1:1924185/100‑1 (MQ=255) gACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGAtt > 1:3262692/1‑100 (MQ=255) ccGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTc < 2:3471494/100‑1 (MQ=255) ccGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTc < 1:623144/100‑1 (MQ=255) gATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTTTTTTTTCTTATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAg > 2:219980/1‑100 (MQ=255) gATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAg < 2:1203523/100‑1 (MQ=255) cagcagGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTaaaa > 1:114219/1‑100 (MQ=255) agGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGc < 2:1827965/100‑1 (MQ=255) ggCCGTGCTCTATAAAGAAGTCGGCTTTTTTTTTTTTTTTTTCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAACTa > 2:355489/1‑97 (MQ=255) ggCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCg < 1:867210/100‑1 (MQ=255) ccGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGAt < 2:2407850/100‑1 (MQ=255) ccGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGAt < 1:1567813/100‑1 (MQ=255) tctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcg > 1:1345334/1‑100 (MQ=255) tctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcg > 1:352014/1‑100 (MQ=255) ctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcgg < 1:2566751/100‑1 (MQ=255) ctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcgg > 2:3654011/1‑100 (MQ=255) ctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcgg < 1:1198883/100‑1 (MQ=255) ctATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCAGATCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCcggcg > 2:160003/1‑99 (MQ=255) tataAAGAAGTCGGCTTTTTGCGCCATCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATCGCGATCCgacggc > 2:1793025/1‑100 (MQ=255) taAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAg < 2:2913182/100‑1 (MQ=255) taAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAg > 1:831625/1‑100 (MQ=255) aaaGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAgg < 2:3022959/100‑1 (MQ=255) aagaagTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGc < 1:3529245/100‑1 (MQ=255) agTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTg > 1:278026/1‑100 (MQ=255) gTCGGCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGc < 2:2340732/100‑1 (MQ=255) tCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCg > 1:1009719/1‑100 (MQ=255) cGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGa < 2:2132079/100‑1 (MQ=255) cGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGa > 2:3991001/1‑100 (MQ=255) gCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAg < 2:2528866/100‑1 (MQ=255) gCTTTTTGCGCCAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAg < 2:734798/100‑1 (MQ=255) tttttGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAggg < 2:3737552/100‑1 (MQ=255) tttttGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAggg > 1:903682/1‑100 (MQ=255) tttttGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAggg > 1:89035/1‑100 (MQ=255) tttttGCGCCAGCAAATCAATCTGCTCTTTCACAACCGCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAggg < 2:3780948/100‑1 (MQ=255) ttttGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGt < 1:3665040/100‑1 (MQ=255) ttttGCGCCAGCAAATCAATATGCTCTTTCACAACCTACATCCGAGGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTACGAAGGGt > 2:2743277/1‑100 (MQ=255) tGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCa > 1:3905454/1‑100 (MQ=255) cgcCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAg > 2:1140192/1‑100 (MQ=255) gcCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAgg < 2:3877212/100‑1 (MQ=255) gcCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAgg < 1:1440431/100‑1 (MQ=255) ccAGCAAATCAATCAGCTCTTTCACAACCTGCATCCGATGGCTGACGGTGATTTCAGTGAAATAGCGAGCCGGCGGCAGGCGTTGCGAAGGGTTCAAgg < 2:1029737/99‑1 (MQ=255) ccAGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAggg > 1:4112147/1‑100 (MQ=255) aGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGAt > 2:437193/1‑100 (MQ=255) aGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGAt > 1:695651/1‑100 (MQ=255) aGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGAt > 1:2036862/1‑100 (MQ=255) aGCAAATCAATCAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGAt < 1:160006/100‑1 (MQ=255) gCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATg > 2:2687574/1‑100 (MQ=255) aaaTCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCg < 1:3355433/100‑1 (MQ=255) aatcaatcTGCTCTTTCACCACCTCCATCCGATGGCTGACGGTGCTTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGc > 2:3596762/1‑98 (MQ=255) atcaatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTg < 2:848122/100‑1 (MQ=255) atcaatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTg < 2:3542308/100‑1 (MQ=255) atcaatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGCTCAAGGGATGCGTg > 2:1103713/1‑100 (MQ=255) tcaatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGCAGGGTTCAAGGGATGCGTGa < 2:402292/100‑1 (MQ=255) tcaatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGa < 1:437196/100‑1 (MQ=255) tcaatcAGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGa < 2:3195895/100‑1 (MQ=255) caatcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGac < 2:2515928/100‑1 (MQ=255) atcTGCTCTTTCACAGCCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGac < 1:3995768/98‑1 (MQ=255) tcTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGGTTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAGGGGTTCAAGGGATGCGTGaccac > 2:3126430/1‑100 (MQ=255) tGCTCTTTTACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGACCACCg > 2:2307930/1‑100 (MQ=255) | TGCTGACGCAGGGCGATGAGCGTAGGGCCATCAATATTGACCGATGCCAGCAGGCCGTGCTCTATAAAGAAGTCGGCTTTTTGCGCCAGCAAATCAATCTGCTCTTTCACAACCTCCATCCGATGGCTGACGGTGATTTCAGTAAAATAGCGATCCGGCGGCAGGCGTTGCGAAGGGTTCAAGGGATGCGTGACCACCG > NC_000913/3678838‑3679036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |