| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 23.4% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 23.4% | 670.4 / 177.8 | 286 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (82/133); new base T (55/10); total (143/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.50e-01 | |||||||||||
Only 100 of 289 total aligned reads displayed.
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 | tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCgg > 2:75980/1‑100 (MQ=255) attttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAAATCGTGCTAATTCAATATATTGC‑A‑GAAA‑CCTTGTAGGCCTGATAAGCGTAgcgc > 1:1406379/10‑100 (MQ=17) aatttgtaggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGC‑A‑GAAA‑TCATGTAGGCCTGATAAGCGTAgcgc > 1:3320330/10‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑A‑TGAG‑CCACGTAGGCCTGATAAGCGTAGCGCa > 1:1294540/7‑98 (MQ=17) tgtaggCCGGATAAGGCGTTCACTCCGCATCCGGCCTAC‑AAAAGCACGCAAATTCAATATATTGC‑A‑GAGA‑TTGCGTAGGCCTGATAAGCGTAGCGCATc > 1:3992390/6‑99 (MQ=11) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAAATCGTGCTAATTCAATATATTGC‑A‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCa > 2:4062215/5‑99 (MQ=17) gtaggCCGGATAAGGCGCTTACGCCGCATCCGGCCTAC‑AAGAACGTGCAAATTCAACAAATTGTGATGCAT‑CCT‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:1023285/5‑100 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAgg > 1:2918897/1‑100 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTCC‑A‑GAAT‑TTTCGTAGACCTGATAAGAGGAGCGCATCAgg < 2:2567147/100‑1 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑A‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:3633099/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGTTCGTGCAAATTCAATAAATTGC‑A‑‑ATA‑TGACGTAGGCCTGATAAGCGTAGCGCATCAGGcg > 1:638026/3‑99 (MQ=21) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAgg > 2:3368986/1‑99 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑G‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2546909/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGT‑G‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1516650/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGC‑A‑GGAG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3830939/2‑100 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1754180/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1639382/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:743393/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGA‑T‑CGAT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:3517283/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGC‑A‑GGAA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGCag > 1:2784636/1‑99 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑A‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:2910422/9‑98 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 2:228456/7‑98 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑A‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:303077/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGC‑A‑GGAG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:535835/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGC‑AGGAAC‑GAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaacta > 1:3390970/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGC‑A‑CAGC‑TAGCGTAGGCCTGATAAGCGTAGCGCATCAGGCagatt > 2:2796848/7‑96 (MQ=25) gataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑A‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt > 2:2828621/6‑100 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2382480/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3438729/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:3608705/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:3730951/1‑100 (MQ=255) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt < 2:11452/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:320447/100‑1 (MQ=255) cgTTAACGCCTTATCCGACCAAC‑‑AAATTATGCAACTCCACAATATTGC‑A‑GAAA‑TTAAGTAGGACTTATAAGCATAACGCATAAAACAtttattcgttt > 2:329578/1‑90 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 1:2669803/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:474306/99‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 1:899379/100‑1 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 1:4091024/1‑100 (MQ=255) aCGCCTTATCCGGCTTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:3690947/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:384417/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg > 1:259524/1‑100 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 1:3105986/1‑100 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt < 1:1890908/100‑1 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCACCAGTCtt > 1:3390128/1‑100 (MQ=255) tCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGt > 1:3224180/1‑100 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:1582880/100‑1 (MQ=255) ccGGCATAC‑AAAATCGTGCTAATTCGATACATTGC‑A‑GACT‑TTTCGTAGGCTTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCGATCAGTCGTGTa < 2:2425323/100‑1 (MQ=18) gCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg > 2:2502602/1‑100 (MQ=255) gCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 1:4043368/100‑1 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:3057963/100‑1 (MQ=255) tAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 2:1963119/100‑1 (MQ=255) tAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 1:2730040/100‑1 (MQ=255) tAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 1:606860/100‑1 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:222163/1‑100 (MQ=255) aaaaTCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 1:3150127/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:3430994/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 2:3522212/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCAACAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat > 2:2663186/1‑100 (MQ=255) aTCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 2:3699686/99‑1 (MQ=255) tGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 1:2980534/1‑100 (MQ=255) tGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:1676166/100‑1 (MQ=255) gCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 2:1735904/100‑1 (MQ=255) cAAATTCAATACATTGC‑A‑GAAA‑TATGGTAGGCGTGATAAGATAAGCGCATTAGGCATTTTTACATTAATAATAAGACTAGTATGGCTCGGAATTATTc > 2:942887/1‑98 (MQ=9) aaaTTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 2:3390235/100‑1 (MQ=255) aaTTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa > 2:1261108/1‑100 (MQ=255) aaTACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGAc > 1:3564456/1‑100 (MQ=255) aTACATTGC‑A‑GAAT‑TTTCGTAGGACTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCGTGTCTGGCTTTTAATTATTCGATAGAGACg > 2:3988596/1‑100 (MQ=255) tACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGt > 1:3498028/1‑100 (MQ=255) cATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 2:911901/1‑100 (MQ=255) cATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 1:11339/1‑100 (MQ=255) a‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:1079983/100‑1 (MQ=255) a‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:1370910/100‑1 (MQ=255) gAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 1:1844958/1‑100 (MQ=255) t‑tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt < 1:1160293/100‑1 (MQ=255) t‑tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGCTTTCGCAGTGAt > 1:3916876/1‑100 (MQ=255) cGTAGGCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatcc < 1:1534681‑M2/100‑71 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccg < 1:1483842‑M2/100‑72 (MQ=255) tAGGCCTGATAAGCGCAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTATATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGc > 2:3938122/1‑100 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGc > 2:315705/1‑99 (MQ=37) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:2166590/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:1934575/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:2577527/100‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggca < 1:211633‑M2/100‑75 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggca < 1:1447241‑M2/100‑75 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaa < 1:3874311‑M2/100‑76 (MQ=255) cTGATAAGCGGAGCGCATCAGGAATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt < 2:4142988/100‑1 (MQ=255) tGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaa < 2:2101865‑M2/100‑79 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 1:1089222/100‑1 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 2:1046475/100‑1 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 1:1331146/100‑1 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 1:2378466/100‑1 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 2:205706/1‑100 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg < 1:2293630/100‑1 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTACCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 1:1206315/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTTTTTTTTTTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 2:1920843/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa < 1:2478949/100‑1 (MQ=255) gCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCaa < 2:871727/100‑1 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc > 1:3777612/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 2:3848214/100‑1 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:2004929/100‑1 (MQ=255) | TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑A‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |