| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,950,468 | G→T | 100% | intergenic (+48/‑39) | ilvL → / → ilvX | ilvG operon leader peptide/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,950,468 | 0 | G | T | 96.6% | 465.3 / 4.9 | 156 | intergenic (+48/‑39) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (2/4); new base T (57/91); total (61/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAA > NC_000913/3950371‑3950564 | tgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGttt > 1:3853898/1‑100 (MQ=255)tgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGttt > 2:1928438/1‑100 (MQ=255)tgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGttt > 1:3581273/1‑100 (MQ=255) gATTATTATCCCACCGTGCGGGGCTGCGCTTGGACGAGGAACGGCTTAGAGATCAAGCCCTAACGAACTAAGACCCCCGCTCCGAAAGGTCCGGGGtttt > 2:3738280/1‑100 (MQ=255) gATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttt > 1:185680/1‑100 (MQ=255) gATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttt > 1:3313389/1‑100 (MQ=255) ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttttt > 2:1398072/1‑100 (MQ=255) ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTtttt > 2:3602069/1‑99 (MQ=255) tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTtttttt > 1:3421309/1‑100 (MQ=255) attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttttttt < 2:3157918/100‑1 (MQ=255) attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttttttt > 1:2270269/1‑100 (MQ=255) attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGtttttttt < 1:1831994/100‑1 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTtttttttt > 2:3729620/1‑100 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTtttttttt > 1:2756887/1‑100 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTAGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTg < 2:1365679/100‑1 (MQ=255) atCCCACCGTGCGGGGCTCCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGa < 2:1026804/100‑1 (MQ=255) atCCAACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGa < 2:1023003/100‑1 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGAc < 1:4131589/100‑1 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGAcc < 2:2324144/99‑1 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCt > 1:3565777/1‑100 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCATTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCt > 1:3512540/1‑100 (MQ=255) aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTa < 2:1949651/100‑1 (MQ=255) ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTATCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTa < 1:468225/99‑1 (MQ=255) gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAAc < 2:3334586/100‑1 (MQ=255) cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACa < 1:3729647/100‑1 (MQ=255) cGGGGCGGCACTTGGACGAGGAAAGGCTTAGAGATCAAGGCGTAACGAACTAAGACCCCCGCACCGAAAGGGCCGGGGTTTTTTTTTGACCTTAAAAACa < 2:2064943/100‑1 (MQ=255) gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAAc < 1:2650093/100‑1 (MQ=255) gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAAc > 1:4175518/1‑100 (MQ=255) gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAAc > 1:1498316/1‑100 (MQ=255) tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCg < 2:1129263/100‑1 (MQ=255) aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGATTTTTTTTGACCTTAAAAACATAACCgcg > 2:970996/1‑97 (MQ=255) aCTTGGAACAGGAAAGGCTTAGAGAACAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCgagg < 1:1589018/100‑1 (MQ=255) cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCgagga > 2:2769617/1‑100 (MQ=255) cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCgagga < 2:54353/100‑1 (MQ=255) ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAATCATAACCgaggag < 2:2582587/100‑1 (MQ=255) gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg < 2:3853869/100‑1 (MQ=255) gAGGAAAGGCTTAGAGATCAAGCCTTAACTAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTGTTTGACCTTAAAAACATAACCGAGGAGCAGACa < 2:2510596/100‑1 (MQ=255) aGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGAACTTAAAAACATAACCGAGGAGCAGACaa > 2:3272719/1‑100 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt > 1:1727140/1‑100 (MQ=255) gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg < 2:2533924/100‑1 (MQ=255) gAAAGGCTTAGAGATCAAGCCTTAACGAACGAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg < 1:2446224/100‑1 (MQ=255) aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGCGCAGACACTGaa > 2:2891803/1‑100 (MQ=255) aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa > 1:902224/1‑100 (MQ=255) aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt < 1:3455182/100‑1 (MQ=255) aGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt > 1:615613/1‑100 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGTTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:2125096/1‑100 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa < 2:1484524/100‑1 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa < 1:2336378/100‑1 (MQ=255) cTTAGAGATCAAGCCTTAACGAACTGAGCCCCCCGCACCGAAAGGTCCGGGGTCTTTGTTTTACCTTACAAAACTAACGGCGGCGCAGAAAATGAATaa > 2:2625375/1‑99 (MQ=255) ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa < 2:162049/100‑1 (MQ=255) tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 1:2191850/1‑100 (MQ=255) tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg < 2:3957635/100‑1 (MQ=255) gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca > 1:2951648/1‑100 (MQ=255) aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcacan < 1:2348478/100‑2 (MQ=255) aaGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt < 2:2613263/100‑1 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc < 1:1519872/100‑1 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc > 2:4095412/1‑100 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt > 1:354809/1‑100 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGCTTTTTTTTGCCCTTAACACCATAACCGACGAGCCGACAATGAATAACACcaca > 2:3247990/1‑93 (MQ=255) cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 2:216772/100‑1 (MQ=255) cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 1:941479/100‑1 (MQ=255) cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 1:1041370/100‑1 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg > 1:3649442/1‑99 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 2:2943064/100‑1 (MQ=255) ttAACGAACTAAGACCCCCGCACAGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 2:4038041/100‑1 (MQ=255) ttAACGAACTAACACCCCCGGACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:660576/100‑1 (MQ=255) tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTTTTCTTTTAAACATAACCGAGGAGCAAACAATGAATAACAGCACAACATTCTGtt > 2:654768/1‑100 (MQ=255) aaCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 1:2413937/97‑1 (MQ=255) aCGAACTAAGACCCCCGCACCGGAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:3133545/100‑1 (MQ=255) aCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 2:1897323/100‑1 (MQ=255) aCGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:3977717/100‑1 (MQ=255) gAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc < 1:918112/100‑1 (MQ=255) gAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 1:501272/98‑1 (MQ=255) gAACTAAGACCACCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAACCATAAACGGCGAGAAGCCAATGACTAACCGCACAACAtac > 2:3442769/1‑90 (MQ=255) aCTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa < 1:3638079/100‑1 (MQ=255) tAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAGCCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg < 2:864581/99‑1 (MQ=255) cccccGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCa < 2:2710530/99‑1 (MQ=255) cccccGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg > 1:307222/1‑100 (MQ=255) cccccGCACCGAAAGGTCC‑GGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 2:3797681/100‑1 (MQ=255) ccccGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 1:3161281/100‑1 (MQ=255) ccccGAGCCGAAAGGCCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 1:885701/100‑1 (MQ=255) cccGCACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa > 1:2140136/1‑100 (MQ=255) ccGCATCGAAAGGGCCGGGGTTTTTTTTTGACCTTAAAAACATACCCGGGTAGTAGACAATGAAGAACAACACAAAATGCTGTTTCTCAAGTTTCAGGAc < 2:901153/100‑1 (MQ=255) cACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGCGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg > 1:3842509/1‑100 (MQ=255) cACCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg < 1:1050027/100‑1 (MQ=255) agcGAAGGGTCCGGGGTTTTTTTTTGACCTTAGAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAGATTCTGTTTCTCAAGATTCAGGACgggg < 2:1165103/98‑1 (MQ=255) aCCGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg < 2:2962989/100‑1 (MQ=255) ccGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggggn < 1:1685162/100‑2 (MQ=255) ccGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg > 1:1256744/1‑99 (MQ=255) ccGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa < 1:1380132/100‑1 (MQ=255) ccGAAAGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa > 1:1252349/1‑100 (MQ=255) gAAAGGTCCGGGGTTTTTTTTTTTTTTTTTATTCTTAACCGAGGAGCAGTCAATGAATAATTGCACAAGATTCTGTTTCTCAAGATTCCGGACGGGGaa > 2:3542231/1‑99 (MQ=255) aaGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACCTTCAATAACAGCTCAAAATTGTGTTTCTCAAGCTTCAGCACgcg > 2:681050/1‑92 (MQ=255) aaGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaact < 2:1125001/99‑1 (MQ=255) aGGTCCGGGGTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaa > 1:1058688/1‑100 (MQ=255) ccGGGGTTTTTTTTTTTTTTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTAt > 2:242390/1‑100 (MQ=255) ccggggTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATg > 1:1521468/3‑100 (MQ=255) gggtTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGaa < 2:3260148/100‑1 (MQ=255) ggggTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGa < 2:2682128/99‑1 (MQ=255) gggTTTTTTTTTTTTTTTAAAACATAACCGAGGAGCAGACAATGCATAACAGCACAACAGTCTGGTTCTCTAGTTTCAGGACGGGGAACTTACTAt > 2:1132432/1‑96 (MQ=255) | TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAA > NC_000913/3950371‑3950564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |