BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,143,125	C→T	100%	D415N (GAC→AAC)	rne ←	endoribonuclease; RNA‑binding protein;RNA degradosome binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,143,125	0	C	T	100.0%	321.2 / ‑6.7	97	D415N (GAC→AAC)	rne	endoribonuclease; RNA‑binding protein;RNA degradosome binding protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (45/51); minor base A (0/1); total (45/52)

Only 100 of 106 total aligned reads displayed.

TTGGCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTCACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCCAGCAGGC  >  NC_000913/1143029‑1143220

ttGGCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacg                                                                                              <  1:3049262/100‑1 (MQ=255)

 tGGCACCGGAACAATGGCGTGAACTTACTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATATAGAGCGACAGCGATTCGTTGTtacgc                                                                                             >  2:31072/1‑100 (MQ=255)

  ggCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgca                                                                                            >  1:3738624/1‑100 (MQ=255)

  ggCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgca                                                                                            >  1:2277542/1‑100 (MQ=255)

  ggCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgca                                                                                            <  1:315288/100‑1 (MQ=255)

  ggCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgca                                                                                            >  1:2631542/1‑100 (MQ=255)

   gCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgcac                                                                                           <  1:557662/100‑1 (MQ=255)

   gCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTtacgcac                                                                                           >  2:3429809/1‑100 (MQ=255)

     acaGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATCGAGAGCGACAGCGATTCTTTGTTACGCACgg                                                                                         <  1:2806665/100‑1 (MQ=255)

      caGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGt                                                                                        >  1:3226688/1‑100 (MQ=255)

        ggAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGc                                                                                      <  1:2032274/100‑1 (MQ=255)

        ggAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGc                                                                                      >  2:1799867/1‑100 (MQ=255)

        ggAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGc                                                                                      >  2:3080042/1‑100 (MQ=255)

         gAACAATGGCGTGAACTTCCTTGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGcc                                                                                     <  2:3577939/100‑1 (MQ=255)

         gAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGcc                                                                                     <  1:2330345/100‑1 (MQ=255)

          aaCAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGcc                                                                                     <  2:3744548/99‑1 (MQ=255)

           aCAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAg                                                                                   <  1:1497668/100‑1 (MQ=255)

               tGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTAcc                                                                               <  1:2769699/100‑1 (MQ=255)

               tGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTAcc                                                                               <  1:564603/100‑1 (MQ=255)

               tGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTAcc                                                                               <  1:1096021/100‑1 (MQ=255)

               tGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTAcc                                                                               <  1:1211772/100‑1 (MQ=255)

               tGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTAcc                                                                               <  2:714764/100‑1 (MQ=255)

                  cGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGa                                                                            >  2:840509/1‑100 (MQ=255)

                  cGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGa                                                                            <  1:634838/100‑1 (MQ=255)

                   gTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGCCGCAGAATAGAGAGCGACAGAGATTCGTTGTTACGCACGGTGCCAGTACCAGaa                                                                           <  2:613736/100‑1 (MQ=255)

                    tGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGaac                                                                          <  1:760009/100‑1 (MQ=255)

                     caaCTTCCTGGGTGTTCTCTTTCAGCTCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCCATTCGTTGTTACGCACGGTGCCAGTACCAGac                                                                           <  2:2912895/97‑2 (MQ=255)

                       aCTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGAGCCAGTACCAGaacaac                                                                       >  1:3855616/1‑100 (MQ=255)

                        cTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAAcg                                                                      >  1:2295808/1‑100 (MQ=255)

                          tCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAAcgcg                                                                    >  1:78905/1‑100 (MQ=255)

                          tCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAAcgcg                                                                    <  1:3154410/100‑1 (MQ=255)

                           ccTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCgg                                                                   <  2:2418662/100‑1 (MQ=255)

                             tGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGAc                                                                 >  2:1351624/1‑100 (MQ=255)

                             tGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGAc                                                                 >  2:48682/1‑100 (MQ=255)

                                  gtTCTCTTTCAGCTCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACg                                                            <  2:1240678/100‑1 (MQ=255)

                                  gtTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACg                                                            <  1:1852933/100‑1 (MQ=255)

                                  gtTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACg                                                            <  1:3705913/100‑1 (MQ=255)

                                    tctcTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGtg                                                          <  1:3694768/100‑1 (MQ=255)

                                     ctctTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGtga                                                         <  1:3264371/100‑1 (MQ=255)

                                      tctTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGtg                                                          <  2:1606685/98‑1 (MQ=255)

                                       ctTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGtgatg                                                       <  1:3609058/100‑1 (MQ=255)

                                         ttCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGAc                                                     >  1:1904046/1‑100 (MQ=255)

                                            aGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTCCCAGAACAACGCGGACAGACGTGATGACTgg                                                  <  1:2804512/100‑1 (MQ=255)

                                            aGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTgg                                                  >  2:1594188/1‑100 (MQ=255)

                                            aGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTgg                                                  >  2:1163593/1‑100 (MQ=255)

                                             gcgcTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGa                                                 <  1:3612456/100‑1 (MQ=255)

                                             gcgcTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGa                                                 >  1:3493748/1‑100 (MQ=255)

                                              cgcTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGAt                                                >  2:1879970/1‑100 (MQ=255)

                                              cgcTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGAt                                                <  1:1097889/100‑1 (MQ=255)

                                                  tcttcttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCAc                                            <  1:3100282/100‑1 (MQ=255)

                                                    ttcttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCAccc                                          >  1:1766910/1‑100 (MQ=255)

                                                    ttcttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCAccc                                          >  2:1947351/1‑100 (MQ=255)

                                                    ttcttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCAccc                                          >  2:3559909/1‑100 (MQ=255)

                                                     tcttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCa                                         <  2:1404103/100‑1 (MQ=255)

                                                      cttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAg                                        >  2:2147838/1‑100 (MQ=255)

                                                      cttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAg                                        <  1:638804/100‑1 (MQ=255)

                                                      cttcGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTAAGCACGGTGACAGTACCAGAACAACGCGGACAAACGTGATGAATGGATTAAACCa                                         >  2:1370624/1‑99 (MQ=255)

                                                         cGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACAGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGa                                     >  2:2309351/1‑100 (MQ=255)

                                                          gATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACT‑GATTCACCCAGTGATg                                   >  2:3918421/1‑100 (MQ=255)

                                                            tCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGACgg                                  >  2:1597498/1‑100 (MQ=255)

                                                              aGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGc                                <  1:3371941/100‑1 (MQ=255)

                                                              aGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGc                                <  1:3523821/100‑1 (MQ=255)

                                                              aGACGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAAAGTGATGACTGGATTCACCCAGTGATGGGc                                >  1:1300211/1‑100 (MQ=255)

                                                                aCGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTCCCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTc                              >  2:2592901/1‑100 (MQ=255)

                                                                 cGCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCa                             >  1:2443421/1‑100 (MQ=255)

                                                                  gCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAg                            >  2:3677782/1‑100 (MQ=255)

                                                                  gCAGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAg                            <  1:2109105/100‑1 (MQ=255)

                                                                    aGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGTCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGgc                          <  2:639102/100‑1 (MQ=255)

                                                                    aGAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAgg                           <  2:3374636/99‑1 (MQ=255)

                                                                     gAATAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGgcg                         <  1:199605/100‑1 (MQ=255)

                                                                        tAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTg                      <  1:1619341/100‑1 (MQ=255)

                                                                        tAGAGAGCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTg                      >  1:498411/1‑100 (MQ=255)

                                                                         agagagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGa                     >  2:3549603/1‑100 (MQ=255)

                                                                          gagagCGACAGAGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCGCAGGCGCTGAc                    >  2:342093/1‑100 (MQ=255)

                                                                           agagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTCCCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGCTGGGCTCAGGCGCTGACg                   >  2:2228357/1‑100 (MQ=255)

                                                                           agagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACg                   <  1:441657/100‑1 (MQ=255)

                                                                            gagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGGCAAACGTGATGCCTGGATTCACCCAGTGATGGGCTCAGGCGCTGACgg                  >  1:2286288/1‑100 (MQ=255)

                                                                            gagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACgg                  <  1:112015/100‑1 (MQ=255)

                                                                            gagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACgg                  >  1:3682658/1‑100 (MQ=255)

                                                                            gagCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACgg                  <  2:2620353/100‑1 (MQ=255)

                                                                             agCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACggg                 <  1:1773944/100‑1 (MQ=255)

                                                                              gCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTTATGGGCTCAGGCGCTGACggg                 <  2:1991039/99‑1 (MQ=255)

                                                                              gCGACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGa                >  1:1149132/1‑100 (MQ=255)

                                                                                gACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGCTGCACTCAGTGAAGGGCTCAGGCGCTGACGGAACa              >  1:1539062/1‑100 (MQ=255)

                                                                                gACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACa              >  1:3428011/1‑100 (MQ=255)

                                                                                gACAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACa              >  1:1494497/1‑100 (MQ=255)

                                                                                 aCAGCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACAt             >  1:571697/1‑100 (MQ=255)

                                                                                  cAGCGATTCGTTGTTACGCACTGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGTGCTGACGGGAc               <  2:2038311/97‑1 (MQ=255)

                                                                                    gCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTc          >  1:2474411/1‑100 (MQ=255)

                                                                                    gCGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTc          >  2:2982412/1‑100 (MQ=255)

                                                                                     cGATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTcc         <  2:3627787/100‑1 (MQ=255)

                                                                                      gATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCca        <  2:1916094/100‑1 (MQ=255)

                                                                                      gATTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCca        <  1:1137911/100‑1 (MQ=255)

                                                                                      gATTCGTTATAACGCACGGTGCCAGTACAAGAACAACGCGGACAAACGTGATGGCTGGATGCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTcc         <  2:194227/99‑1 (MQ=255)

                                                                                       aTTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCcag       <  1:1163598/100‑1 (MQ=255)

                                                                                       aTTCGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCcag       >  1:1707056/1‑100 (MQ=255)

                                                                                          cGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCcagcag    >  1:2491759/1‑100 (MQ=255)

                                                                                          cGTTGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCcagcag    >  1:1508631/1‑100 (MQ=255)

                                                                                           gttgttACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCCAGCAgg   <  1:1136404/100‑1 (MQ=255)

                                                                                            ttGTTACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCCAGCAGGc  <  2:3548049/100‑1 (MQ=255)

TTGGCACAGGAACAATGGCGTGAACTTCCTGGGTGTTCTCTTTCAGCGCTTCTTCTTCGATCAGACGCAGAATAGAGAGCGACAGCGATTCGTTGTCACGCACGGTGCCAGTACCAGAACAACGCGGACAAACGTGATGACTGGATTCACCCAGTGATGGGCTCAGGCGCTGACGGGACATTTCCAGCAGGC  >  NC_000913/1143029‑1143220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`