| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,197,739 | A→G | 100% | S167P (TCC→CCC) | ymfE ← | e14 prophage; putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,197,739 | 0 | A | G | 97.7% | 527.0 / ‑1.3 | 164 | S167P (TCC→CCC) | ymfE | e14 prophage; putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base G (87/72); total (88/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCTTA > NC_000913/1197641‑1197834 | cactGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAggaaggaa > 2:3797970/1‑100 (MQ=255) tgcgaATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGATTGCAAAAAAAGATTATTAGGAAGGGAAtt > 2:3978158/4‑100 (MQ=255) aaTGAAAAAATTACAAAAAAGAATAAAGACAGCAAAGAAAAAAAAAAAAAAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAAt < 2:1894062/99‑1 (MQ=255) aTGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATACATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGc > 2:2252480/1‑100 (MQ=255) tGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCa > 1:3237142/1‑100 (MQ=255) tGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACACGAAAAATATCCATTTGTTTGCAAAAAAAGATTATAAGGAAGGGAATTAATGCa > 2:2310327/1‑100 (MQ=255) tAAAATTACAAAGAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAAtt > 1:2742029/1‑100 (MQ=255) aaaaTAACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTa < 1:1961673/100‑1 (MQ=255) tACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaa < 1:428158/100‑1 (MQ=255) tACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaa > 2:568002/1‑100 (MQ=255) aCAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaa < 2:3710043/100‑1 (MQ=255) aaaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAt < 1:1382263/100‑1 (MQ=255) aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAACAtt > 1:1837115/1‑100 (MQ=255) aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAtt > 2:1073914/1‑100 (MQ=255) aaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTc < 1:556577/100‑1 (MQ=255) aaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTc > 1:2526432/1‑100 (MQ=255) aaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTc > 1:3468903/1‑100 (MQ=255) aaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCa < 1:3346222/100‑1 (MQ=255) aGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATCTGTTTGCAAAAAAAGATTATTAGAAAGGGAATTAATGCAATTATCGAAAATTCaaa > 2:3566396/1‑100 (MQ=255) gAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCaaaa > 1:1037353/1‑100 (MQ=255) aaTAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCaaaaa > 1:2257156/1‑100 (MQ=255) aaaaaaACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCaaaaaa < 1:3043498/98‑1 (MQ=255) aaaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTTTTAGGAAGGGTATTAATGCAATTATCGAGAATTCAAAAAata < 1:2816599/100‑1 (MQ=255) aaaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAata < 2:2889039/100‑1 (MQ=255) aaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat > 2:1170460/1‑100 (MQ=255) aaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat > 1:2180433/1‑100 (MQ=255) aGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATc > 2:4041756/1‑100 (MQ=255) aGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATc > 1:997954/1‑100 (MQ=255) gACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATcc < 1:1626462/100‑1 (MQ=255) aCAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCa > 1:1324332/1‑100 (MQ=255) cAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat > 2:3012733/1‑96 (MQ=255) gCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaaa > 2:2542283/1‑100 (MQ=255) gCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATCAAGAAGAGAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaaa > 2:3104351/1‑100 (MQ=255) cAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaaaa > 1:633805/1‑100 (MQ=255) aaaGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAAt < 1:2586175/100‑1 (MQ=255) aaGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATa < 1:3145524/100‑1 (MQ=255) aaGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATa > 1:2582435/1‑100 (MQ=255) aGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAg < 1:2252494/100‑1 (MQ=255) aCCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGtat > 2:1364553/1‑100 (MQ=255) aCCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGta > 2:3537622/1‑99 (MQ=255) ccTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGtata > 1:342642/1‑100 (MQ=255) ccTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGtata > 1:1075705/1‑100 (MQ=255) ttCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACt < 1:3658942/100‑1 (MQ=255) aCATGAAAAATATCCATTTGTTTGAAAAAAAGGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTAt < 1:1299128/100‑1 (MQ=255) aTGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTc < 1:885902/100‑1 (MQ=255) tGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc < 2:1549669/100‑1 (MQ=255) tGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc < 1:3782021/100‑1 (MQ=255) tGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc < 1:1766697/100‑1 (MQ=255) aaaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCag > 2:3184351/1‑100 (MQ=255) aaaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCag < 1:18343/100‑1 (MQ=255) aaaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCag < 2:3643568/100‑1 (MQ=255) aaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCaga > 2:1447245/1‑100 (MQ=255) aaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCagaag < 2:2998662/100‑1 (MQ=255) tCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGtt > 1:3149994/1‑100 (MQ=255) ccATTTAATTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTAAAAAAAAAAAAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTc < 2:450383/100‑1 (MQ=255) cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa > 1:89978/1‑100 (MQ=255) cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa > 2:2317341/1‑100 (MQ=255) cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa < 2:1739654/100‑1 (MQ=255) cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa < 1:3169932/100‑1 (MQ=255) cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATCATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa > 2:3614591/1‑100 (MQ=255) aTTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa < 1:3075563/100‑1 (MQ=255) aTTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa < 2:1231196/100‑1 (MQ=255) tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAatat > 1:3086155/1‑100 (MQ=255) tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAatat > 1:4038453/1‑100 (MQ=255) tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAatat > 1:3804618/1‑100 (MQ=255) gtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAAtata > 2:709149/1‑100 (MQ=255) aaaaaaaaaaaaaGATAATTAGGAAGGAAAGTAATGCAATTATCGAAAATACAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGtt < 2:3386308/87‑1 (MQ=255) ttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAAt > 2:75946/1‑100 (MQ=255) ttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAAt < 1:2283083/100‑1 (MQ=255) ttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAAt < 1:1876724/100‑1 (MQ=255) tgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATACAAAAATAGTATACTTTATTCCAGACGAGTTCACTCTAAt < 2:3481558/99‑1 (MQ=255) gCAAAAGAAGATTATTAGGAAGGGAACTAATGCCATTATCGACAATTAAAAAAATATCCAAAAATAGAATACTTTATTCCAGAATATTTCAATaaaa > 2:1625617/1‑97 (MQ=255) gCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATg > 2:3674319/1‑99 (MQ=255) gCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt < 2:3541224/100‑1 (MQ=255) gCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt > 1:762777/1‑100 (MQ=255) gCAAAAAAAGATTATTAGGAAGGGAATTAATGAAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt < 2:344090/100‑1 (MQ=255) cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt > 1:1055778/1‑100 (MQ=255) cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt > 1:3844834/1‑100 (MQ=255) cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt > 2:4087787/1‑99 (MQ=255) cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAAAAAAAAAAAATAGTATACTTTATTCCAGAAGAGTTCAAtata < 2:3121653/95‑1 (MQ=255) aaaaaaaGATTATTAGGAAGAAAATTAATGAAATTATCGAAAATACAAAAAAAAAAAAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGttt < 2:517631/100‑1 (MQ=255) aaaaaaaGATTATAAGGAAGGGAATTAATGCAATTATCAAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATAAAATGttt > 2:2575870/1‑100 (MQ=255) aaaaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTg < 2:176981/100‑1 (MQ=255) aaaaaaGATTATTAGGAAGGGAATTAATGCAATTAAAAAAAAAAAAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTg < 2:3691074/100‑1 (MQ=255) aaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTc < 2:2868766/100‑1 (MQ=255) aGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTc < 1:3592620/100‑1 (MQ=255) aGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTc < 1:817886/100‑1 (MQ=255) aGATTATTAAGAAGGGAATTAATGAAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTc < 2:1249528/100‑1 (MQ=255) gATTATTAGGAAGGGAATTAATGCAATTATCGGAAATTCAAAAAATATCCAAAAATAGTATACATAATTCCAGAAGAGTTCAATATAATGTTTGTCTTCa > 2:1322255/1‑100 (MQ=255) attattAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCaa > 1:3149342/1‑100 (MQ=255) attattAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCaa < 1:2905654/100‑1 (MQ=255) attattAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCaa > 1:2671211/1‑100 (MQ=255) attattAGGAAGGGAATTAATGCAATTATCGAAAAATAAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCaa < 2:3091571/100‑1 (MQ=255) actaGGAAGGGAAATAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAAttt > 1:2807584/3‑100 (MQ=255) tgggaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAAttttt > 1:2834500/3‑100 (MQ=255) taGGAAGGGAATTAATGCAATTATCGAAAATTCAAAACATATCCAAAAATAGTATACTTTATTCCAGAAGCGTTCAAAATAATGTTTGTCTTCTAttttt > 2:3371253/1‑100 (MQ=255) taGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAAttttt < 2:2113634/100‑1 (MQ=255) ggaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCt > 2:839399/1‑100 (MQ=255) gaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCtt < 2:1457402/100‑1 (MQ=255) gaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCtt < 2:3281/100‑1 (MQ=255) | CACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCTTA > NC_000913/1197641‑1197834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |