| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,368,184 | A→T | 78.9% | M36L (ATG→TTG) | pspA → | regulatory protein for phage‑shock‑protein operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,368,184 | 0 | A | T | 78.9% | 260.8 / 72.7 | 130 | M36L (ATG→TTG) | pspA | regulatory protein for phage‑shock‑protein operon |
| Reads supporting (aligned to +/- strand): ref base A (14/13); new base T (48/54); total (63/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-02 | |||||||||||
Only 100 of 130 total aligned reads displayed.
TTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGC > NC_000913/1368087‑1368277 | tttttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATg < 1:3913245/100‑1 (MQ=255) ttttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTgg < 1:4053679/100‑1 (MQ=255) tttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGa < 1:584610/100‑1 (MQ=255) ttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGaa < 1:1634355/100‑1 (MQ=255) ctcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGa > 2:2487881/1‑100 (MQ=255) ctcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGa < 1:3185701/100‑1 (MQ=255) cGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATa < 2:3777076/100‑1 (MQ=255) cGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATa < 2:1954815/100‑1 (MQ=255) gCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATac > 1:1220512/1‑100 (MQ=255) cTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATaca < 2:110245/100‑1 (MQ=255) tttGGCGTCATCGTGAATGACAACATAAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAACCTGGTTCGTCTGAACATCAAGGAGATGGAAGATacac > 2:3909778/1‑100 (MQ=255) ttGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACt < 1:1428685/100‑1 (MQ=255) gCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTgg > 1:1767309/1‑100 (MQ=255) gCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTgg > 1:3018229/1‑100 (MQ=255) gCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTgg > 1:232165/1‑100 (MQ=255) ccGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGt > 1:3039747/1‑100 (MQ=255) cGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGtt > 1:1232701/1‑100 (MQ=255) gACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGtt < 2:258445/99‑1 (MQ=255) gACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTg < 1:2169417/100‑1 (MQ=255) aCATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGa < 1:3930296/100‑1 (MQ=255) aTCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAg < 2:3447692/100‑1 (MQ=255) tGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACg > 1:1820141/1‑100 (MQ=255) aaTGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGtt < 2:3243248/100‑1 (MQ=255) gCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATGCACAGAAACTGGTGCGTCTGATGATCCAGTAGTTGGAAGATACACTGGTTGAAGTACGTTCTa < 2:1883962/100‑1 (MQ=255) gCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTc > 2:2483916/1‑98 (MQ=255) gCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTa > 1:1570676/1‑100 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGTGTTGGATGATACACTGGTTGAAGTACGTTCt < 2:848225/98‑1 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTAc > 2:1780567/1‑100 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTAc > 1:1482080/1‑100 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTAc > 1:3005020/1‑100 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTAc < 2:3798128/100‑1 (MQ=255) cATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCg > 2:235275/1‑100 (MQ=255) aTCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCgg < 1:2196984/100‑1 (MQ=255) aTCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCgg < 2:185240/100‑1 (MQ=255) aTCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCgg < 1:1016741/100‑1 (MQ=255) aTCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCg < 1:3601380/99‑1 (MQ=255) tCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTCGTTCgg > 2:1349774/1‑99 (MQ=255) tCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgc > 1:2582763/1‑100 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg > 1:3160953/1‑100 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg > 2:1347658/1‑100 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg < 1:1420567/100‑1 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg < 1:4042190/100‑1 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg < 2:67559/100‑1 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg > 2:2911674/1‑100 (MQ=255) cGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcgc < 2:2367429/100‑1 (MQ=255) tctGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGcgcgcgcg < 2:3528235/100‑1 (MQ=255) tGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGtt < 1:751606/100‑1 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 2:2991808/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 1:396292/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 1:390194/1‑100 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGc < 2:1232695/100‑1 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGc > 1:519888/1‑100 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGc < 1:3637460/100‑1 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGAGACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGc < 2:2281189/100‑1 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGc < 1:3064078/100‑1 (MQ=255) agagAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCa > 1:2158284/1‑100 (MQ=255) gagaAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCag < 2:1522425/100‑1 (MQ=255) agaAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCaga > 2:1621169/1‑100 (MQ=255) gaAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaa > 2:1375769/1‑100 (MQ=255) aGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaag < 2:754976/100‑1 (MQ=255) aGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaag < 1:3569633/100‑1 (MQ=255) gCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaaga > 1:2703780/1‑100 (MQ=255) gCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaaga < 1:1547275/100‑1 (MQ=255) cGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagaa < 1:723147/100‑1 (MQ=255) gAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAAc < 2:395121/100‑1 (MQ=255) gATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGc > 1:622011/1‑100 (MQ=255) gATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGc < 1:689289/100‑1 (MQ=255) gATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCACAAAAGAAACAGc < 1:2735441/100‑1 (MQ=255) gATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGc > 1:1775785/1‑100 (MQ=255) gATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGc > 1:2739546/1‑100 (MQ=255) gATCCACAGAAACTAGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGc > 2:2692681/1‑100 (MQ=255) aTCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCt < 1:4055764/100‑1 (MQ=255) aTCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCt < 1:2522855/100‑1 (MQ=255) tCCACCGAACCTGGTTCGGCTGCTGACCCAGCACCTGAAAGACACACTCGTCGCAGTACGTTCCACTTCGGCCCGCGCGTTGGCAGAAAAGAAACCGCTg > 2:3999257/1‑100 (MQ=255) cacaGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagagatcggaaga > 1:3809862/1‑90 (MQ=255) acaGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACt < 2:112303/100‑1 (MQ=255) acaGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACt > 2:2580108/1‑100 (MQ=255) aGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCg > 1:1664795/1‑100 (MQ=255) aaCTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCg < 1:2833163/100‑1 (MQ=255) aaCTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTAGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCg > 2:2377312/1‑100 (MQ=255) aCTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGt > 1:3974472/1‑100 (MQ=255) tcgTTCGACGGACGATCCAGGAGTTGGACGGTCCATTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAACCATCTGACTCGCCGt < 2:4174252/96‑1 (MQ=255) ggTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTAtt < 1:657420/100‑1 (MQ=255) tcttccgatctgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:440965/90‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:2912929/100‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:517184/100‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:1953872/100‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTGGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:2796287/100‑1 (MQ=255) tCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGaa < 1:112131/100‑1 (MQ=255) cGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAAc < 1:3519678/100‑1 (MQ=255) gTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACa > 1:125690/1‑100 (MQ=255) cTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAg < 1:3637307/100‑1 (MQ=255) tgatgaTCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGACAAGAAACAGCTGACTCGCCGGATTGAACCAg > 2:2480800/1‑99 (MQ=255) tgatgaTCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGc > 1:3354724/1‑100 (MQ=255) gatgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGCCTCGCCGTATTGAAAAAgag > 2:729913/1‑98 (MQ=255) gatgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCg < 1:1375777/100‑1 (MQ=255) gatgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCg > 2:3799495/1‑100 (MQ=255) tgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTc > 1:2380355/1‑100 (MQ=255) tgatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTc > 1:1190036/1‑100 (MQ=255) ccAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGgcg > 1:3818929/1‑100 (MQ=255) | TTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGC > NC_000913/1368087‑1368277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |