| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,564,601 | A→G | 72.4% | F378S (TTT→TCT) | dosP ← | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,564,601 | 0 | A | G | 72.4% | 177.8 / 69.0 | 108 | F378S (TTT→TCT) | dosP | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Reads supporting (aligned to +/- strand): ref base A (13/17); new base G (44/34); total (57/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATAAAGG > NC_000913/1564507‑1564697 | gATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTgg > 2:2492067/1‑100 (MQ=255) aTGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGa < 1:2774183/100‑1 (MQ=255) aTGAAATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCAAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGa < 1:3690781/100‑1 (MQ=255) tGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGAt < 2:3319832/100‑1 (MQ=255) gaTACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAg > 2:2378111/1‑100 (MQ=255) gaTACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAg > 1:3083075/1‑100 (MQ=255) tACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAgtt > 1:2330544/1‑100 (MQ=255) tACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAgtt < 2:567830/100‑1 (MQ=255) caccacGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAgttgt > 1:2385527/1‑100 (MQ=255) caccacGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAgttgt > 1:184174/1‑100 (MQ=255) ccacGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTc < 2:2198682/100‑1 (MQ=255) cacGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCa > 1:1071589/1‑100 (MQ=255) cacGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCa > 1:1051169/1‑100 (MQ=255) cGGGTGAGACTGCTTTTTCGACAAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAat > 2:404493/1‑100 (MQ=255) cGGGAGAGACGGGTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAat > 1:2744345/1‑100 (MQ=255) cGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAat < 1:3042332/100‑1 (MQ=255) gggAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAata < 1:2917001/100‑1 (MQ=255) ggAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAatat > 2:2375121/1‑100 (MQ=255) gaCGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGa > 1:2903718/1‑100 (MQ=255) cTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑t > 2:306413/1‑100 (MQ=255) cTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑t < 1:2749692/100‑1 (MQ=255) ttGTCGACCAGTGCAGCGAGGTAATTTTCCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑ttt < 2:3963754/100‑1 (MQ=255) ttGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑ttt < 1:3181739/100‑1 (MQ=255) gTCGACCAGGTCATCTAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑ttttt < 1:4102376/100‑1 (MQ=255) gTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑ttttt > 2:2339351/1‑100 (MQ=255) gTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATCTGGCAGACCGGTCATCGGAACAGATTGGATGAGTTGTTCAATATGCTGACGGC‑ttttt > 2:2262962/1‑100 (MQ=255) tCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑tttttt < 2:728285/100‑1 (MQ=255) cGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTc > 2:34916/1‑100 (MQ=255) gatctggTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTcc < 2:331427/95‑1 (MQ=255) gACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTcc < 2:1472471/100‑1 (MQ=255) gACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTcc > 1:3599690/1‑100 (MQ=255) gACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTcc < 2:1100189/100‑1 (MQ=255) aCCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCt > 2:3720737/1‑100 (MQ=255) ccAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTg < 2:3348121/100‑1 (MQ=255) ccAGGTCATCGAGGTAATTGTGCAGGTTATTGCGACTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTg > 2:880138/1‑100 (MQ=255) cAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGt < 1:2139175/100‑1 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt < 2:1336366/100‑1 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt < 1:2674897/100‑1 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt > 2:667131/1‑100 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt < 1:3754273/100‑1 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt > 2:2777352/1‑100 (MQ=255) aGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt > 1:2451268/1‑100 (MQ=255) aGGTCATCGAGGTAATCGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGtt < 2:1255117/100‑1 (MQ=255) ggTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTccagatc > 1:331430/1‑95 (MQ=255) gTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTcc < 2:2170599/100‑1 (MQ=255) gTCATCGAGGTAATTGTGCAGGATATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGCTTTTTTTCCTGTTc > 2:1480562/1‑100 (MQ=255) tCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTcca < 1:1353926/100‑1 (MQ=255) cATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccag > 2:177073/1‑100 (MQ=255) cATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccag < 1:1613596/100‑1 (MQ=255) aTCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagc < 1:1452896/100‑1 (MQ=255) aTCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagc > 1:12919/1‑100 (MQ=255) tCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcg < 2:1740580/100‑1 (MQ=255) tCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcg > 1:4086174/1‑100 (MQ=255) cGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgc > 2:1097436/1‑100 (MQ=255) cGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgc > 1:3145971/1‑100 (MQ=255) gAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgcc < 1:306416/100‑1 (MQ=255) aGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgcca > 2:2317875/1‑100 (MQ=255) ggTAATTGTGCAGGTTATTGCGATTTGGCAGACCTGGCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgcc < 2:676538/98‑1 (MQ=255) ggTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgccag > 2:1690731/1‑100 (MQ=255) ggTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgccag > 1:22875/1‑100 (MQ=255) tAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgccagcg > 2:645251/1‑100 (MQ=255) tAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTccagcgccagcg > 1:3129114/1‑100 (MQ=255) ttGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCgg < 1:2140744/100‑1 (MQ=255) tgtgCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGc < 2:3223810/100‑1 (MQ=255) tgCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCa < 1:3720764/100‑1 (MQ=255) gCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTAACTATGCTGACGGC‑TTTTTTACTGTTCAAGCCCCAACGCGGCCat > 1:1558828/1‑100 (MQ=255) aGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCatat > 2:790470/1‑100 (MQ=255) ggTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCatat > 2:792691/1‑99 (MQ=255) ggTTATTGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATg > 1:3336034/1‑100 (MQ=255) gTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTGTTCCTGTTTCAGCGCCAGCGAGGCCATATgc > 1:1606379/1‑100 (MQ=255) tATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATgctg < 2:1241250/100‑1 (MQ=255) ttGCGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATgctggc < 1:1612111/100‑1 (MQ=255) gtgATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATgctggctg < 1:2078496/98‑1 (MQ=255) cGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGa > 1:1642936/1‑100 (MQ=255) cGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGa > 1:1652850/1‑100 (MQ=255) cGATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGa > 1:793465/1‑100 (MQ=255) gATTTGGCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGat > 1:3518121/1‑100 (MQ=255) tGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCt < 1:1947249/100‑1 (MQ=255) gCAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGc < 1:1757251/100‑1 (MQ=255) cAGACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGcc > 1:243468/1‑100 (MQ=255) cAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGcc < 1:896025/100‑1 (MQ=255) gACCGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAc > 1:2848082/1‑100 (MQ=255) aCCGGTCATCGGATCAGATTGGATGAGCTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcg < 1:95953/100‑1 (MQ=255) ccGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcgc > 2:3797183/1‑100 (MQ=255) ccGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcgc > 1:3338700/1‑100 (MQ=255) ccGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcgc > 1:4144188/1‑100 (MQ=255) cGGTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcgcg < 1:2187866/100‑1 (MQ=255) ggTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCTAGCGCCAGCGAGGCAATATGCTGGCTGATATCTGCAAcgcg > 2:944804/1‑99 (MQ=255) ggTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCCGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCAcgcg > 2:3363934/1‑99 (MQ=255) ggTCATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCAGCCACGCGt > 1:1891363/1‑100 (MQ=255) gTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGtt < 2:2451253/100‑1 (MQ=255) gTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCAGATATCAGCCagcatat < 2:2820687/100‑7 (MQ=255) cATCGGATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCg < 1:1659678/100‑1 (MQ=255) cATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCg < 1:2265067/100‑1 (MQ=255) ggATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCACAGCGGCCATATGCTGGCTGATATCGCCCACGCGTTCGAt < 2:2573467/98‑1 (MQ=255) ggATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATaa < 1:1311707/100‑1 (MQ=255) gATCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTTCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATaaa > 2:1153612/1‑100 (MQ=255) tCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATAAAgg < 2:2626213/100‑1 (MQ=255) tCAGATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATAAAgg < 2:1040062/100‑1 (MQ=255) cAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTTTTTTTTTTTTTCCAACGAGGCCATATACTGGCTGATATCTGCCACGGGGTCGATaaa > 2:3577532/1‑97 (MQ=255) | GATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGCGATTTGGCAGACCGGTCATCGGATCAAATTGGATGAGTTGTTCAATATGCTGACGGC‑TTTTTTCCTGTTCCAGCGCCAGCGCGGCCATATGCTGGCTGATATCTGCCACGCGTTCGATAAAGG > NC_000913/1564507‑1564697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |