| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,584,031 | A→G | 75.3% | intergenic (‑72/+176) | safA ← / ← ydeP | two‑component system connector membrane protein, EvgSA to PhoQP/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,584,031 | 0 | A | G | 75.3% | 250.2 / 78.6 | 141 | intergenic (‑72/+176) | safA/ydeP | two‑component system connector membrane protein, EvgSA to PhoQP/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (20/15); new base G (50/56); total (70/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
TGTTTTTCACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATCCA > NC_000913/1583935‑1584127 | ttttCACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAgg > 1:3746790/1‑100 (MQ=255) ttCACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAAGGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGaa > 2:2306731/1‑100 (MQ=255) tCACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGaaa < 1:2619687/100‑1 (MQ=255) cACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAAt > 2:1641127/1‑100 (MQ=255) cACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAAt > 2:3282467/1‑100 (MQ=255) ntgtgGTCGCCTGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGATGGAGAGAAGAGGAAATAg > 2:3334051/2‑100 (MQ=255) tgtgGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAgg < 1:3257724/100‑1 (MQ=255) gtgGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGa > 1:3559924/1‑100 (MQ=255) gtgGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGa > 1:3583854/1‑100 (MQ=255) ggTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACt > 1:3177688/1‑100 (MQ=255) catgcatTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGc > 1:27464/1‑100 (MQ=255) atgcatTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCt < 1:848134/100‑1 (MQ=255) tgcatTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCtt > 1:2896067/1‑100 (MQ=255) gcatTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTc < 1:3090199/100‑1 (MQ=255) atTTCAAATATGTTTATTTATCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAATAGGAAATAGGAATGGTGCTTCa > 2:2037785/1‑99 (MQ=255) atTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAg > 2:3130714/1‑100 (MQ=255) atTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAg < 1:2900982/100‑1 (MQ=255) atTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAg < 1:1033568/100‑1 (MQ=255) ttCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAg < 2:425920/98‑1 (MQ=255) aaTATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGa > 1:3068304/1‑100 (MQ=255) atatGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGTAAATAGGACTGGTGCTTCAGTACTGa < 2:70137/99‑1 (MQ=255) tatGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGc > 1:1969575/1‑100 (MQ=255) tatGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGc < 1:178496/100‑1 (MQ=255) atgatcaattaGCGGATAACGTTAAAAATCGTTAAGGAGTATGCGTAATATAACAGGATGGAGAGAAGGGGAAATAGGACTGGTGCTTCAGTACTGAGc < 2:1177286/91‑1 (MQ=255) atGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGCAGAGGAAATAGGACTGGTGCTTCAGTACTGa > 2:2500239/1‑97 (MQ=255) tGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGAAAATAGGACTAGTGCTTCAGTACTGAGCgg > 2:3619517/1‑100 (MQ=255) tGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCgg < 1:3809117/100‑1 (MQ=255) tGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCgg < 2:89819/100‑1 (MQ=255) gTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGGACTGAGCGGa > 2:3898334/1‑100 (MQ=255) gTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTGAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTAGTGCTTCAGTACTGAGCGGa > 2:643888/1‑100 (MQ=255) tttatttaGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAg < 1:2603665/100‑1 (MQ=255) ttatttaGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGt < 1:2542293/100‑1 (MQ=255) tatttaGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGtt < 1:2241639/100‑1 (MQ=255) ttaGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCt < 1:2444523/100‑1 (MQ=255) taGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCtt < 1:3883606/100‑1 (MQ=255) taGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCtt < 2:3787442/100‑1 (MQ=255) gCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTa < 1:3282490/99‑1 (MQ=255) gATAACGTTAAAAATAGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGc < 2:3415440/100‑1 (MQ=255) aaCGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGt < 2:1049831/100‑1 (MQ=255) aCGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTa < 1:1655482/100‑1 (MQ=255) aCGTTAAAAATCGTTAATAAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTa < 2:961223/100‑1 (MQ=255) cGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAg > 2:3178540/1‑100 (MQ=255) cGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAg > 1:2780345/1‑100 (MQ=255) cGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAg > 2:3488251/1‑100 (MQ=255) cGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAg < 1:1741776/100‑1 (MQ=255) gTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAgg > 1:3698783/1‑100 (MQ=255) gTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAgg > 2:430431/1‑100 (MQ=255) ttAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGc > 1:3684891/1‑100 (MQ=255) ttAAAAATCGTTAATAAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACTGCTGTa > 1:388948/1‑97 (MQ=255) tAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCCGTACTGAGCGGAGTTTCTTACAGCTGTAGGCa > 2:3507432/1‑100 (MQ=255) aaaaaTCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAggaa < 2:1941013/99‑3 (MQ=255) aaaaaTCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAg < 1:1097510/100‑1 (MQ=255) aTCGTTAAGCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGt < 1:147344/100‑1 (MQ=255) gTTAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTta < 2:3741628/100‑1 (MQ=255) tAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTtata < 1:738075/100‑1 (MQ=255) tAATCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTtata < 2:2351471/100‑1 (MQ=255) aaTCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTatat < 2:1233589/100‑1 (MQ=255) aTCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATc > 1:823693/1‑100 (MQ=255) tCAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCt < 1:14719/100‑1 (MQ=255) tCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATc < 2:1912086/99‑1 (MQ=255) tCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCt > 2:2064290/1‑100 (MQ=255) cAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGCCTGGTGCTTCAGTATTGAACGGAGATTATTACAGCTGTAGACAGAAGTTTATATc > 2:2151977/1‑98 (MQ=255) cAGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCtt > 1:1874708/1‑100 (MQ=255) aGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTta < 1:2836698/100‑1 (MQ=255) aGTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTta > 2:4076810/1‑100 (MQ=255) gTATGCTTAATATAACAGGCTGGAGAGAAGATGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTgat < 2:176570/100‑1 (MQ=255) gTATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTtat < 1:3178560/100‑1 (MQ=255) gTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTtat > 2:3608337/1‑100 (MQ=255) tATGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTtata < 1:3501895/100‑1 (MQ=255) aTGCTTAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAg < 1:3297949/100‑1 (MQ=255) gCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTa > 2:1418852/1‑100 (MQ=255) ttAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTTGTGCTTCAGTACTTAGCGTAGTTTCTTACAGCTTTAGGCAGAAGTTTATATCTTATAGTATg < 2:2742270/100‑1 (MQ=255) tAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGt < 2:151949/100‑1 (MQ=255) tAATATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGt > 2:2012616/1‑100 (MQ=255) aaTATAACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTa > 1:1011376/1‑100 (MQ=255) aaTATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGt > 1:2737660/1‑99 (MQ=255) ataACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtt > 1:1249986/1‑100 (MQ=255) ataACAGGCTGGAGAAAAGAGGAAATAGTACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAg < 1:1156705/98‑1 (MQ=255) taACAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTGCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGt > 2:336667/1‑98 (MQ=255) taACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGttt > 2:1275965/1‑100 (MQ=255) aaCAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGttta > 2:2786121/1‑100 (MQ=255) aaCAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGttta < 2:1402494/100‑1 (MQ=255) aCAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaa > 1:1367837/1‑100 (MQ=255) cAGGCTGGAGGGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaat < 2:1175765/100‑1 (MQ=255) cAGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaat < 1:100810/100‑1 (MQ=255) aGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaatt < 2:1046159/100‑1 (MQ=255) aGGCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaatt < 1:2838237/100‑1 (MQ=255) ggCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaattt < 1:196543/100‑1 (MQ=255) ggCTGGAGAGAAAAGGAAATAGGACTATTGCGTCAGTACTGAGTGGAGTATCTTACAGATTTAGGCAGAAGTTTATATCTTATAGTTTGTAGtttaattt < 2:1865573/100‑1 (MQ=255) ggCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACGGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaattt > 1:2297330/1‑100 (MQ=255) ggCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATCGTATGTAGtttaattt > 2:2437865/1‑100 (MQ=255) ggCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaattt > 1:604544/1‑100 (MQ=255) gCTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaattta > 2:293989/1‑100 (MQ=255) cTGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGtttaatttaa > 1:4058123/1‑100 (MQ=255) tGGAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTttaatttaat < 1:3517582/100‑1 (MQ=255) ggAGAGAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATc < 2:4163482/100‑1 (MQ=255) gagaAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATcc < 1:836145/100‑1 (MQ=255) agagAAGAGGAAATAGGACTGGTGCTTCAGTACTTAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATCCa < 1:3983579/100‑1 (MQ=255) agagAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATCCa > 2:2230499/1‑100 (MQ=255) agagAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTATTACAGCTGTATGCAGAAGTTTATATCTTAGAGTATGTAGTttaatttaat < 2:2552240/97‑1 (MQ=255) | TGTTTTTCACTGTGGTCGCATGCATTTCAAATATGTTTATTTAGCGGATAACGTTAAAAATCGTTAATCAGTATGCTTAATATAACAGGCTGGAGAAAAGAGGAAATAGGACTGGTGCTTCAGTACTGAGCGGAGTTTCTTACAGCTGTAGGCAGAAGTTTATATCTTATAGTATGTAGTTTAATTTAATCCA > NC_000913/1583935‑1584127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |